Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_D11
Parameters: 2 7 7 80 10 50 1000
Length:  68311261

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   

This is table  216  of  226  ( 27070 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64494836--64494876
16
2.6
16
80
0
55
41
7
0
51
1.30
64494905--64494943
16
2.5
15
87
4
51
46
10
5
38
1.60
64495200--64495229
15
2.0
15
93
0
51
20
16
6
56
1.62
64495276--64495709
109
4.0
110
87
2
561
32
15
17
34
1.92
64496848--64497098
129
1.9
129
95
0
448
32
12
17
37
1.87
64503317--64503348
15
2.1
16
94
5
57
68
3
0
28
1.04
64514746--64514776
14
2.1
15
94
5
55
25
25
0
48
1.52
64518687--64518730
20
2.3
18
88
7
61
34
2
0
63
1.07
64518687--64518746
20
3.1
20
81
13
56
33
1
3
61
1.22
64520463--64520506
23
1.9
24
90
9
74
54
2
20
22
1.56
64520830--64520922
36
2.5
35
78
10
96
44
1
22
32
1.60
64520831--64520922
37
2.5
38
77
11
102
44
1
21
32
1.60
64521013--64521123
37
2.8
37
74
10
89
21
19
26
32
1.97
64523175--64523237
32
2.2
26
69
27
63
31
17
12
38
1.87
64535958--64536020
20
3.5
18
79
14
67
31
1
1
65
1.12
64535975--64536021
16
2.9
16
74
20
53
34
0
2
63
1.06
64537904--64537966
20
3.5
18
79
14
67
31
1
1
65
1.12
64537921--64537967
16
2.9
16
74
20
53
34
0
2
63
1.06
64538112--64538209
44
2.2
44
89
5
144
30
5
29
34
1.79
64538366--64538400
18
2.0
17
88
5
52
54
0
0
45
0.99
64538375--64538571
61
3.3
61
70
11
206
48
5
3
43
1.40
64538484--64538520
16
2.2
17
86
13
51
54
0
2
43
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64538603--64538639
16
2.2
17
86
13
51
54
0
2
43
1.14
64538352--64538640
120
2.4
120
98
0
553
48
3
2
44
1.35
64538647--64538858
88
2.4
89
89
4
320
46
4
3
46
1.39
64538637--64538795
44
3.5
44
69
18
121
47
3
2
46
1.31
64538637--64538786
47
3.3
46
72
17
161
47
3
2
46
1.33
64544103--64544133
14
2.1
15
94
5
55
25
25
0
48
1.52
64545051--64545156
52
2.0
53
83
5
135
36
10
16
35
1.83
64550933--64550963
14
2.1
15
94
5
55
25
25
0
48
1.52
64551656--64551695
17
2.4
17
100
0
80
37
5
22
35
1.76
64552977--64553027
24
2.1
24
100
0
102
49
7
13
29
1.70
64557531--64557931
132
3.0
132
93
0
694
25
23
18
32
1.97
64558323--64558424
51
2.0
51
100
0
204
33
21
13
31
1.92
64559310--64559365
9
6.3
9
82
11
55
0
14
0
85
0.59
64559300--64559362
19
3.2
19
90
6
90
0
17
0
82
0.67
64559297--64559364
15
4.4
16
82
15
81
0
17
0
82
0.67
64559297--64559355
6
10.0
6
80
10
68
0
18
0
81
0.69
64570828--64570861
16
2.0
17
88
11
52
58
0
0
41
0.98
64571877--64571910
17
2.0
17
94
0
59
44
50
0
5
1.26
64576517--64576550
17
2.0
17
94
0
59
44
50
0
5
1.26
64579786--64579825
21
1.9
21
100
0
80
27
10
20
42
1.83
64586810--64586839
3
10.0
3
100
0
60
33
0
0
66
0.92
64598461--64598495
16
2.2
16
90
10
54
74
5
0
20
1.02
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64605311--64605351
21
2.0
21
90
0
64
19
29
21
29
1.98
64609374--64609415
20
2.0
21
86
4
59
21
26
2
50
1.61
64609988--64610018
14
2.1
15
94
5
55
25
25
0
48
1.52
64610432--64610464
16
2.1
16
88
11
50
75
6
0
18
1.00
64614405--64614584
91
2.0
90
91
1
288
31
18
21
28
1.97
64617732--64617902
87
2.0
87
89
4
265
31
19
18
30
1.96
64619928--64619958
14
2.1
15
94
5
55
25
25
0
48
1.52
64627633--64627661
14
2.0
15
93
6
51
27
24
0
48
1.51
64638154--64638204
20
2.8
18
75
18
52
54
3
3
37
1.37
64639194--64639227
18
1.9
17
88
5
50
23
5
14
55
1.61
64640238--64640372
30
4.4
30
78
12
148
22
5
8
62
1.47
64640303--64640349
12
3.8
12
83
10
58
23
2
6
68
1.24
64640306--64640372
26
2.4
29
87
9
95
20
4
7
67
1.34
64640538--64641077
157
3.4
159
91
1
845
53
8
8
28
1.61
64668165--64668294
65
2.0
65
100
0
260
24
16
24
33
1.96
64668174--64668308
65
2.1
65
92
2
227
25
18
23
31
1.97
64669544--64669587
20
2.2
20
84
8
54
36
0
4
59
1.18
64670409--64670445
3
12.7
3
83
16
51
37
0
0
62
0.96
64670898--64670931
17
2.0
17
88
0
50
76
8
14
0
1.01
64674033--64674095
32
2.2
26
69
27
63
31
17
12
38
1.87
64678530--64678570
21
2.0
21
81
18
50
31
19
26
21
1.97
64689524--64689554
14
2.1
15
94
5
55
25
25
0
48
1.52
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64691823--64691995
20
8.4
20
69
22
60
66
0
33
0
0.92
64691840--64691967
10
12.8
10
79
3
114
68
0
31
0
0.90
64691823--64691967
50
2.9
49
83
8
177
68
0
31
0
0.90
64691830--64691970
45
3.5
39
74
17
121
68
0
31
0
0.90
64691854--64691967
50
2.3
51
89
6
178
67
0
32
0
0.91
64692322--64692356
16
2.1
18
89
10
56
68
0
5
25
1.11
64692322--64692888
157
3.7
156
86
4
808
51
6
11
31
1.63
64692322--64692897
310
1.9
309
90
3
935
51
6
10
31
1.63
64694164--64694446
50
5.8
49
84
7
373
26
21
32
19
1.97
64694168--64694446
97
2.9
95
89
4
398
26
21
32
19
1.97
64694167--64694488
50
6.7
47
82
6
288
27
21
31
20
1.98
64696435--64696463
6
4.8
6
100
0
58
48
17
17
17
1.82
64698622--64698705
37
2.3
37
84
8
109
50
9
4
35
1.56
64698692--64698738
23
2.0
23
84
8
60
59
12
2
25
1.45
64699272--64699342
35
2.0
35
100
0
142
36
21
5
36
1.77
64702661--64702795
40
3.4
39
77
9
134
39
20
17
22
1.93
64702823--64702976
41
3.8
41
92
0
236
21
22
25
30
1.99
64703282--64703322
21
2.0
20
85
4
55
19
0
41
39
1.52
64703582--64703610
15
1.9
15
100
0
58
13
0
51
34
1.42
64703561--64703646
36
2.4
36
84
3
111
24
0
38
37
1.56
64704588--64704626
21
1.9
20
89
5
60
28
38
5
28
1.78
64707953--64708032
37
2.2
37
97
0
151
42
18
6
32
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64708543--64708602
18
3.4
18
64
13
52
43
6
10
40
1.64
64708850--64708956
43
2.5
43
95
0
187
22
17
34
25
1.96
64709030--64709073
22
2.0
22
95
0
79
43
22
20
13
1.87
64711686--64711723
16
2.4
16
86
4
51
55
28
7
7
1.57
64717181--64717211
14
2.1
15
94
5
55
25
25
0
48
1.52
64731070--64731110
20
2.0
21
90
4
66
19
29
4
46
1.71
64731253--64731321
36
1.9
36
93
0
120
20
18
8
52
1.72
64731741--64731770
14
2.1
15
93
6
53
26
26
0
46
1.53
64732759--64732847
41
2.2
41
97
0
169
34
17
8
38
1.82
64740877--64740902
8
3.2
8
100
0
52
46
0
0
53
1.00
64745736--64745764
14
2.0
15
93
6
51
27
24
0
48
1.51
64754499--64754773
146
1.9
146
94
2
489
40
11
14
33
1.81
64756415--64756465
20
2.8
18
77
13
59
54
1
3
39
1.30
64758413--64758463
16
3.3
16
71
20
54
25
7
11
54
1.63
64758403--64758533
30
4.2
29
75
19
131
23
6
7
61
1.47
64758468--64758515
12
3.8
12
81
10
51
22
4
6
66
1.32
64758471--64758537
26
2.4
29
87
9
95
22
5
5
65
1.37
64758411--64758540
64
2.0
67
89
6
203
23
6
7
61
1.48
64758691--64759243
158
3.5
157
91
2
831
54
8
9
28
1.60
64761437--64761487
18
2.8
18
84
0
75
39
29
7
23
1.83
64765170--64765219
17
2.7
20
78
18
70
10
0
44
46
1.37
64769809--64769858
17
2.7
20
78
18
70
10
0
44
46
1.37
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64772340--64772368
14
2.0
15
93
6
51
27
24
0
48
1.51
64774514--64774554
18
2.3
18
100
0
82
36
14
26
21
1.93
64774618--64774673
27
2.2
25
90
6
85
42
3
0
53
1.18
64774759--64774794
18
2.0
18
100
0
72
55
5
11
27
1.57
64778708--64778762
28
2.0
28
85
7
76
40
0
1
58
1.09
64778720--64778808
39
2.3
39
80
7
101
40
3
2
53
1.30
64788243--64788314
29
2.5
28
80
12
85
38
1
1
58
1.15
64790418--64790468
24
2.1
25
79
17
63
29
0
1
68
1.00
64790424--64790473
24
2.1
24
85
7
66
32
0
2
66
1.03
64796206--64796303
23
4.3
23
92
0
151
19
20
27
32
1.97

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226