Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_D11
Parameters: 2 7 7 80 10 50 1000
Length:  68311261

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   

This is table  204  of  226  ( 27070 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61062342--61062375
15
2.3
15
90
5
52
26
0
5
67
1.13
61064339--61064955
28
23.2
28
84
10
748
46
20
0
32
1.53
61064339--61064938
51
11.2
51
82
12
640
46
20
0
33
1.53
61064336--61064955
79
7.8
79
85
9
713
46
20
0
32
1.53
61064564--61064610
23
2.3
19
82
17
51
42
21
0
36
1.53
61077880--61077904
2
12.5
2
100
0
50
0
52
0
48
1.00
61085586--61085669
40
2.1
40
100
0
168
28
4
17
48
1.67
61086845--61086876
3
10.7
3
100
0
64
0
34
0
65
0.93
61098304--61098346
22
2.0
22
100
0
86
48
0
13
37
1.43
61104936--61104999
30
2.1
30
94
0
110
28
28
28
15
1.96
61105461--61105562
49
2.1
49
90
0
159
42
6
22
28
1.79
61107056--61107214
44
3.6
44
81
10
193
23
16
27
32
1.96
61114727--61114771
21
2.3
21
85
11
60
33
2
0
64
1.06
61114747--61114866
57
2.1
59
84
6
158
44
0
2
53
1.14
61115434--61115495
29
2.1
30
90
3
99
29
3
11
56
1.50
61116275--61116310
13
2.8
13
91
0
54
27
0
0
72
0.85
61116432--61116493
30
2.1
30
90
0
97
58
14
3
24
1.51
61118149--61118200
25
2.1
25
88
0
77
55
17
7
19
1.65
61119012--61119045
18
2.0
16
88
11
50
64
0
23
11
1.26
61127057--61127119
21
3.0
22
88
6
94
30
22
15
31
1.95
61131659--61131692
16
2.1
16
89
10
52
58
5
0
35
1.22
61132445--61132495
21
2.4
21
80
0
66
43
35
1
19
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61132389--61132502
21
5.4
21
65
12
54
42
37
4
14
1.66
61133555--61133580
7
3.7
7
100
0
52
42
0
0
57
0.98
61134019--61134091
25
2.9
25
87
0
92
50
17
20
10
1.76
61134785--61134814
8
3.9
8
95
4
53
40
23
10
26
1.86
61136777--61136982
107
1.9
107
91
2
333
46
12
7
33
1.69
61137157--61137192
17
2.1
17
94
0
63
41
19
16
22
1.90
61138769--61138808
20
2.0
21
90
5
64
35
2
30
32
1.71
61143198--61143223
13
2.0
13
100
0
52
46
0
7
46
1.31
61143971--61144011
6
6.7
6
91
5
64
82
4
12
0
0.81
61144549--61144582
14
2.5
14
90
4
52
2
11
50
35
1.54
61144516--61144607
44
2.1
44
97
0
175
9
8
40
41
1.69
61145288--61145816
132
4.0
132
89
1
792
25
25
20
28
1.99
61145613--61145798
44
4.2
44
68
10
119
25
27
20
26
1.99
61153038--61153164
63
2.0
63
100
0
254
55
12
4
26
1.56
61154888--61154931
20
2.1
21
83
4
54
61
2
2
34
1.21
61164857--61164900
23
1.9
23
100
0
88
45
11
6
36
1.67
61172599--61172660
31
2.0
32
83
3
81
46
1
11
40
1.49
61172715--61172755
3
13.3
3
94
5
73
65
2
0
31
1.05
61172800--61172832
17
1.9
17
88
11
50
66
12
0
21
1.23
61174036--61174090
17
3.3
17
75
12
51
10
0
30
58
1.33
61176049--61176143
31
3.1
31
98
0
181
45
13
9
31
1.76
61181009--61181038
15
2.0
15
93
0
51
0
13
10
76
1.01
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61181635--61181697
31
2.0
32
96
3
119
42
15
9
31
1.79
61183110--61183181
28
2.5
29
74
19
71
54
5
5
34
1.47
61186548--61186587
20
2.0
20
85
9
55
45
0
0
55
0.99
61186823--61186873
23
2.1
25
82
13
63
47
1
7
43
1.43
61192988--61193035
22
2.2
22
85
3
62
25
12
20
41
1.87
61193797--61193869
23
3.3
23
66
11
71
45
2
4
47
1.36
61194310--61194440
67
1.9
69
87
3
194
30
8
9
51
1.65
61197320--61197401
26
3.0
27
75
12
87
43
1
2
52
1.22
61197408--61197591
37
4.8
37
67
17
99
44
1
6
47
1.36
61197455--61197488
17
2.0
17
88
11
52
44
0
0
55
0.99
61197402--61197624
119
1.9
119
94
2
396
44
1
6
47
1.36
61197574--61197621
15
2.9
18
79
17
59
47
0
0
52
1.00
61197587--61197627
15
2.7
15
82
17
50
48
0
2
48
1.14
61197729--61197763
18
2.0
17
88
5
52
45
0
0
54
0.99
61197562--61197876
156
2.0
156
97
1
596
48
5
3
42
1.43
61197928--61198018
45
2.0
45
85
2
121
37
28
6
27
1.82
61197999--61198034
16
2.2
16
100
0
72
38
36
0
25
1.56
61198791--61198838
16
2.9
16
73
14
53
62
8
0
29
1.24
61202163--61202199
9
4.1
9
92
0
65
29
10
13
45
1.77
61221326--61221370
15
3.0
15
83
6
56
35
13
0
51
1.41
61221836--61221883
16
2.9
16
73
14
53
62
8
0
29
1.24
61225423--61225486
21
3.1
20
80
6
83
35
25
21
17
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61225745--61225788
13
3.4
12
84
12
52
29
11
0
59
1.32
61226560--61226617
30
2.0
28
86
6
80
0
24
8
67
1.18
61227498--61227537
20
2.0
20
85
0
53
47
0
0
52
1.00
61227501--61227539
18
2.1
18
85
4
51
48
0
0
51
1.00
61227764--61227823
23
2.5
26
79
15
67
48
1
6
43
1.39
61234013--61234053
21
2.0
21
90
0
64
29
21
29
19
1.98
61239367--61239401
16
2.2
16
89
0
52
71
0
0
28
0.86
61239630--61239687
23
2.5
24
80
11
66
34
0
5
60
1.19
61244131--61244206
20
3.9
20
70
15
61
26
6
1
65
1.24
61244212--61244273
28
2.2
28
91
2
99
38
0
0
61
0.96
61247533--61247578
16
2.9
16
93
0
74
32
0
34
32
1.58
61247557--61247651
45
2.1
44
88
1
136
34
5
27
32
1.79
61247789--61247843
25
2.2
25
84
9
69
52
1
0
45
1.11
61247974--61248134
47
3.6
46
69
18
140
48
3
3
45
1.34
61252855--61253145
124
2.3
124
95
1
512
28
17
22
31
1.97
61256287--61256411
56
2.2
56
90
2
189
41
8
13
36
1.74
61256405--61256466
23
2.7
23
89
0
88
33
0
19
46
1.50
61256433--61256675
29
8.4
29
92
0
396
29
0
27
42
1.59
61257902--61257934
7
4.7
7
96
0
57
54
15
0
30
1.41
61259086--61259158
37
2.0
37
89
2
112
31
23
0
45
1.53
61259378--61259407
3
10.0
3
100
0
60
66
0
0
33
0.92
61261324--61261403
11
7.3
11
78
13
85
48
2
25
23
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61261330--61261403
33
2.2
33
86
9
98
50
2
25
21
1.62
61266392--61266471
33
2.4
33
91
0
133
20
22
36
21
1.95
61267010--61267067
27
2.1
28
80
3
64
51
1
0
46
1.11
61267573--61267641
19
3.6
20
74
12
65
63
0
2
33
1.09
61267573--61267614
10
4.3
10
87
6
50
61
0
4
33
1.17
61267757--61267802
20
2.2
20
84
3
56
63
0
4
32
1.14
61267821--61267864
21
2.1
21
83
8
54
27
9
0
63
1.24
61268261--61268305
7
6.3
7
89
5
54
82
0
11
6
0.84
61268267--61268298
15
2.1
15
94
0
55
84
0
12
3
0.74
61268261--61268310
22
2.2
22
85
3
64
82
0
10
8
0.86
61268271--61268312
7
6.0
7
89
8
50
78
0
11
9
0.96
61274233--61274267
7
5.0
7
85
0
52
25
2
2
68
1.17
61274953--61274991
3
13.0
3
100
0
78
66
0
0
33
0.92
61275131--61275205
26
2.9
26
67
15
64
60
9
2
28
1.42
61278348--61278393
23
2.0
23
82
0
56
52
2
0
45
1.13
61279906--61279965
30
2.0
30
93
0
102
48
13
5
33
1.64
61295022--61295085
16
4.2
15
74
9
58
35
0
3
60
1.12
61295039--61295065
8
3.4
8
100
0
54
37
0
0
62
0.95
61295023--61295085
22
2.7
23
78
11
58
34
0
3
61
1.12
61296681--61296744
27
2.4
27
78
14
71
32
10
3
53
1.52
61296920--61296966
23
2.0
24
88
12
71
31
10
2
55
1.46
61308746--61309513
44
17.4
44
75
7
560
28
16
25
29
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61308746--61309429
132
5.2
132
94
0
1172
28
16
25
29
1.97
61310441--61310508
31
2.3
31
79
5
77
4
11
4
79
1.02
61311326--61311354
2
14.5
2
100
0
58
51
0
0
48
1.00
61311419--61311480
26
2.5
26
77
15
67
33
11
3
51
1.54
61311656--61311703
24
2.0
24
88
8
71
31
10
2
56
1.45
61322556--61322618
25
2.5
26
78
17
69
33
11
3
52
1.53
61322794--61322841
24
2.0
24
88
8
71
31
10
2
56
1.45
61328058--61328119
26
2.4
25
78
5
70
64
9
4
20
1.42
61336287--61336530
129
1.9
129
84
1
328
22
27
15
33
1.95
61339307--61339466
84
1.9
84
96
2
295
25
15
20
40
1.90

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226