Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Dt_chr11
Parameters: 2 7 7 80 10 50 1000
Length:  61124829

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   

This is table  205  of  205  ( 24568 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60796850--60796887
19
2.1
19
85
9
53
68
0
0
31
0.90
60798110--60798142
17
1.9
17
93
0
57
24
24
6
45
1.75
60801617--60801649
17
1.9
17
93
0
57
27
24
6
42
1.78
60806173--60806626
113
4.0
113
99
0
899
31
14
17
36
1.90
60807216--60807262
21
2.2
21
92
0
76
29
38
10
21
1.87
60808111--60808155
23
2.0
22
87
12
65
62
0
4
33
1.15
60809086--60809128
12
3.5
12
87
6
59
76
0
6
16
0.99
60809086--60809126
19
2.2
19
91
4
66
75
0
7
17
1.02
60809086--60809128
6
7.0
6
86
5
50
76
0
6
16
0.99
60821619--60821643
13
1.9
13
100
0
50
72
0
4
24
1.02
60825168--60825286
54
2.2
55
89
3
177
45
11
14
28
1.80
60825182--60825327
54
2.8
50
81
11
159
40
13
15
30
1.85
60835521--60835581
28
2.2
28
94
5
106
42
21
8
27
1.81
60843498--60843648
75
2.0
76
97
1
286
25
22
6
45
1.77
60855345--60855386
4
10.5
4
100
0
84
26
0
23
50
1.50
60862666--60862697
15
2.1
15
100
0
64
43
0
12
43
1.42
60862851--60862913
23
2.7
23
82
4
74
44
19
6
30
1.75
60863073--60863111
16
2.5
16
95
4
71
33
7
30
28
1.85
60863310--60863415
55
1.9
54
81
7
124
49
5
1
43
1.37
60863467--60863510
21
2.1
21
95
0
79
59
15
4
20
1.54
60864462--60864493
16
2.0
16
93
0
55
46
6
34
12
1.67
60884202--60884249
18
2.8
17
90
9
71
43
6
4
45
1.48
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60885534--60885807
138
2.0
138
89
0
422
28
18
18
33
1.95
60888205--60888234
14
2.1
14
93
0
51
30
0
16
53
1.44
60893093--60893147
27
2.0
28
86
10
78
34
0
3
61
1.13
60894576--60894651
32
2.4
32
97
2
145
27
10
7
53
1.62
60915583--60915661
30
2.6
29
80
11
81
62
1
6
30
1.28
60915889--60916052
9
18.0
9
69
16
63
29
4
2
62
1.29
60915891--60915939
19
2.5
19
83
3
62
30
6
0
63
1.19
60915933--60916051
29
4.1
27
72
19
89
29
4
3
63
1.30
60916038--60916097
22
2.8
22
82
9
63
33
1
0
65
1.03
60921101--60921137
19
2.1
19
85
10
51
54
8
0
37
1.30
60923616--60923666
22
2.3
22
82
0
66
25
11
5
56
1.57
60925498--60925537
19
2.1
19
85
0
53
7
32
0
60
1.25
60926927--60926953
4
6.8
4
100
0
54
51
0
0
48
1.00
60938866--60938935
10
7.1
10
71
7
54
70
0
2
27
1.02
60938861--60938931
19
3.7
19
73
12
65
67
0
2
29
1.05
60948386--60948416
16
1.9
16
93
0
53
48
0
3
48
1.17
60948844--60948886
21
2.0
21
86
8
61
46
0
4
48
1.22
60954210--60954234
13
1.9
13
100
0
50
8
0
24
68
1.16
60955767--60955963
41
4.8
41
92
5
317
28
20
22
27
1.99
60956180--60956243
33
2.0
32
90
3
101
26
9
25
39
1.86
60956187--60956260
33
2.3
33
80
2
87
28
8
25
37
1.84
60959280--60959307
3
9.3
3
100
0
56
32
0
0
67
0.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60960384--60960479
48
2.0
48
100
0
192
35
14
10
39
1.80
60961185--60961245
25
2.4
25
81
13
72
18
0
11
70
1.16
60961437--60961523
40
2.3
38
86
7
115
33
4
10
51
1.56
60961370--60961487
60
1.9
62
84
8
161
32
5
11
50
1.63
60966379--60967044
156
4.3
157
86
5
901
29
10
8
51
1.64
60966767--60966796
16
1.9
15
93
6
51
26
3
0
70
1.03
60966427--60967032
157
3.9
148
84
7
638
30
10
7
51
1.63
60967374--60967434
30
1.9
30
83
9
77
0
32
3
63
1.10
60967393--60967434
10
4.2
10
79
11
50
0
33
0
66
0.92
60987274--60987310
18
2.1
18
90
10
58
51
13
10
24
1.73
60989048--60989139
13
7.0
13
86
7
132
32
2
6
58
1.36
60989068--60989171
27
3.9
27
80
5
104
34
2
6
55
1.41
60989048--60989139
40
2.3
39
92
1
148
32
2
6
58
1.36
60989175--60989208
15
2.3
15
94
0
59
41
14
2
41
1.61
60989335--60989431
13
7.6
13
74
13
85
41
2
5
51
1.36
60989347--60989432
27
3.2
27
76
15
88
41
2
4
51
1.35
60989358--60989440
13
6.2
13
68
15
53
38
2
4
54
1.35
60989611--60989658
25
1.9
25
95
0
87
39
2
8
50
1.44
60989729--60989762
16
2.1
16
94
0
59
47
8
2
41
1.50
60997273--60997655
165
2.3
164
92
3
644
30
25
21
22
1.99
60998510--60998984
165
2.9
163
92
3
765
30
25
22
21
1.99
61005934--61005981
20
2.4
20
82
6
53
47
4
4
43
1.41
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61005964--61006009
14
3.3
14
78
0
56
39
4
4
52
1.41
61008857--61008903
24
2.0
24
83
8
60
46
12
2
38
1.54
61011335--61011376
18
2.2
20
87
8
61
59
4
0
35
1.19
61011334--61011379
19
2.3
20
82
10
60
58
4
0
36
1.18
61017710--61017982
90
3.0
90
93
0
465
16
26
19
38
1.92
61039814--61040046
94
2.5
95
81
7
269
42
18
12
27
1.86
61039818--61040074
94
2.7
92
79
4
262
43
17
12
27
1.84
61041727--61041757
5
6.4
5
92
7
55
38
0
0
61
0.96
61059195--61059239
18
2.4
19
85
3
56
51
2
4
42
1.34
61071236--61071269
17
1.9
17
88
5
50
61
2
0
35
1.11
61075077--61075144
31
2.2
31
84
7
86
27
5
7
58
1.48
61081222--61081722
146
3.4
143
89
4
711
30
9
6
52
1.61
61083358--61083423
31
2.1
31
82
0
78
63
12
7
16
1.50
61083831--61083873
22
1.9
23
90
4
70
53
9
9
27
1.63
61085916--61085976
27
2.2
28
80
13
74
39
0
3
57
1.15
61087367--61087404
20
2.0
20
89
5
60
39
0
2
57
1.12
61092695--61092741
22
2.2
21
82
17
53
55
0
2
42
1.12
61094233--61094264
16
2.0
16
93
0
55
62
3
0
34
1.11
61103893--61103923
6
5.2
6
100
0
62
32
0
0
67
0.91
61106482--61106657
88
2.0
88
97
0
334
21
19
19
39
1.92
61117755--61117785
16
1.9
16
100
0
62
38
3
6
51
1.44
61118251--61118298
24
2.1
24
84
7
64
45
2
2
50
1.25

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205

The End!