Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167937.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_2, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35885061

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   

This is table  141  of  195  ( 23297 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23763007--23763084
39
2.0
39
87
5
113
33
14
12
39
1.84
23764291--23764315
3
8.3
3
100
0
50
68
0
0
32
0.90
23764672--23764720
3
16.3
3
95
0
62
67
8
0
24
1.18
23766176--23766228
18
3.0
17
72
8
52
43
3
5
47
1.45
23768064--23768115
18
3.0
18
75
16
56
42
0
0
57
0.98
23770156--23770182
2
13.5
2
100
0
54
48
0
0
51
1.00
23775875--23775905
6
5.2
6
92
0
53
64
0
35
0
0.94
23780051--23780094
22
2.0
22
95
0
79
43
13
11
31
1.80
23780493--23780519
2
13.5
2
100
0
54
51
0
0
48
1.00
23781451--23781527
39
2.0
39
92
5
129
22
23
11
42
1.86
23784839--23784955
54
2.2
54
82
0
135
37
34
4
23
1.75
23784839--23784922
27
3.1
27
81
6
107
40
33
3
22
1.71
23789769--23789828
24
2.6
22
76
10
57
55
8
0
36
1.30
23791181--23791227
15
3.2
14
80
19
60
51
0
2
46
1.13
23792786--23792870
13
6.2
13
70
14
55
21
5
4
68
1.30
23792770--23792883
4
28.2
4
68
15
56
21
6
4
68
1.29
23792770--23792835
17
3.9
17
75
16
57
22
3
3
71
1.14
23792784--23792879
35
2.7
35
78
12
99
21
6
5
66
1.34
23793000--23793054
27
2.0
27
85
0
74
41
5
9
43
1.59
23797523--23797558
3
12.0
3
100
0
72
33
0
0
66
0.92
23803561--23803651
38
2.4
38
88
1
137
25
10
15
48
1.77
23804410--23804461
4
12.2
4
80
11
59
23
0
5
71
1.07
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23804410--23804498
35
2.5
36
83
7
103
19
3
8
68
1.31
23807507--23807545
3
13.0
3
100
0
78
66
0
0
33
0.92
23810902--23810939
13
2.8
14
88
8
60
23
7
2
65
1.32
23814691--23814721
3
10.3
3
100
0
62
64
0
0
35
0.94
23817048--23817104
14
3.8
16
73
17
59
42
0
1
56
1.10
23829897--23829947
16
3.4
16
74
20
56
21
0
33
45
1.52
23829879--23829971
30
3.2
29
78
14
86
18
2
32
47
1.60
23830467--23830496
10
3.0
10
95
0
51
73
0
0
26
0.84
23831414--23831452
18
2.1
18
90
4
60
17
7
0
74
1.05
23831805--23831844
21
1.9
21
89
0
62
5
2
10
82
0.91
23831900--23831975
34
2.2
34
80
0
89
50
10
15
23
1.75
23832038--23832129
36
2.6
36
85
0
112
40
14
28
17
1.88
23832182--23832421
34
7.0
34
73
6
153
41
12
24
21
1.87
23832214--23832307
35
2.8
34
77
3
91
44
15
22
17
1.86
23832198--23832421
69
3.3
69
79
3
247
42
12
24
20
1.86
23833448--23833521
24
3.2
23
84
11
82
9
6
2
81
0.97
23833448--23833514
23
2.9
22
86
6
80
8
7
2
80
0.99
23833449--23833509
32
1.9
32
90
6
97
9
8
1
80
0.98
23833458--23833521
23
2.8
23
81
13
78
10
4
3
81
0.96
23844941--23845023
37
2.2
37
83
8
98
21
4
25
48
1.70
23846623--23846656
16
2.1
17
94
5
61
11
5
0
82
0.83
23846678--23846713
6
6.3
6
93
6
58
83
0
0
16
0.65
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23846677--23846713
11
3.4
11
85
14
58
81
0
0
18
0.70
23846773--23846836
28
2.3
28
88
0
101
32
25
23
18
1.97
23849764--23849850
44
2.0
44
88
0
129
33
22
19
24
1.97
23867814--23867844
7
4.4
7
95
0
53
12
38
16
32
1.86
23868255--23868279
2
12.5
2
100
0
50
48
0
0
52
1.00
23879820--23880072
129
1.9
129
80
4
292
46
7
7
37
1.62
23879954--23880365
131
3.1
128
74
10
357
45
7
7
39
1.61
23880428--23880466
20
2.0
20
85
10
53
58
7
0
33
1.26
23880594--23880642
20
2.4
22
83
13
68
48
0
2
48
1.12
23880653--23880714
19
3.3
19
70
23
51
43
1
1
53
1.20
23880795--23880828
12
2.8
12
86
0
50
64
0
17
17
1.29
23885750--23885784
16
2.2
15
90
10
52
60
5
8
25
1.49
23890408--23890748
67
5.3
64
73
10
262
37
8
14
39
1.76
23890409--23890734
130
2.5
130
87
1
456
37
8
13
39
1.76
23894642--23894783
29
4.8
28
72
13
97
52
3
4
40
1.38
23894667--23894791
39
3.2
38
69
15
101
51
4
3
40
1.39
23894669--23894791
19
6.1
19
72
7
66
52
4
3
39
1.39
23894640--23894786
10
14.8
10
68
9
77
52
3
4
40
1.37
23894757--23894851
37
2.6
36
79
12
111
53
8
0
37
1.31
23895097--23895170
28
2.7
26
74
15
62
27
4
2
66
1.23
23895124--23895237
17
6.6
16
72
19
79
28
2
4
64
1.26
23895135--23895197
33
1.9
33
84
12
85
23
1
1
73
1.01
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23895603--23895745
10
14.0
10
67
14
60
39
2
6
51
1.44
23895603--23895643
21
2.0
21
85
9
57
41
2
4
51
1.36
23895690--23895738
20
2.4
20
89
3
71
44
0
4
51
1.20
23897198--23897270
37
2.0
37
83
0
92
52
0
0
47
1.00
23897920--23897986
29
2.2
31
89
5
102
49
0
2
47
1.16
23897953--23898005
23
2.2
25
83
12
67
56
0
3
39
1.17
23899452--23899770
156
2.0
156
98
0
611
31
22
13
31
1.93
23902812--23902855
21
2.1
21
83
8
54
50
18
20
11
1.77
23903572--23903598
3
9.0
3
100
0
54
33
66
0
0
0.92
23909068--23909260
97
2.0
97
87
2
280
43
15
9
31
1.79
23909495--23909553
22
2.7
21
79
10
64
72
0
10
16
1.10
23909842--23909874
17
2.0
17
88
5
50
48
0
0
51
1.00
23912869--23912925
28
2.0
28
83
6
71
35
1
7
56
1.37
23913013--23913084
35
2.1
35
94
0
126
43
12
2
41
1.57
23913561--23913586
3
8.7
3
100
0
52
30
0
0
69
0.89
23920430--23920458
2
14.5
2
100
0
58
51
0
0
48
1.00
23920458--23920492
2
17.5
2
87
0
52
57
0
42
0
0.99
23928200--23928231
11
2.9
11
100
0
64
65
0
0
34
0.93
23928173--23928230
19
3.2
19
80
7
59
56
0
5
37
1.21
23928992--23929021
15
2.0
15
100
0
60
40
0
0
60
0.97
23929102--23929157
24
2.3
24
96
0
103
71
7
1
19
1.18
23931135--23931174
15
2.7
15
92
0
62
47
2
0
50
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23931897--23931955
22
2.7
22
75
15
68
25
5
5
64
1.35
23933585--23933775
95
2.0
95
97
0
364
50
7
15
27
1.70
23933864--23933931
17
3.8
17
68
27
52
69
1
4
25
1.16
23935925--23936508
105
5.4
105
74
11
462
40
6
17
36
1.75
23936254--23936292
17
2.2
18
90
4
62
53
5
15
25
1.62
23936042--23936503
229
2.0
229
82
5
576
40
6
17
36
1.75
23939212--23939247
2
18.0
2
100
0
72
50
0
0
50
1.00
23946372--23946514
20
7.0
20
72
13
121
30
8
11
49
1.69
23946372--23946514
41
3.5
41
87
0
187
30
8
11
49
1.69
23946604--23946665
24
2.6
24
87
7
90
32
3
11
53
1.53
23946747--23946855
18
6.0
18
70
19
75
34
5
11
47
1.64
23952273--23952297
13
1.9
13
100
0
50
0
12
0
88
0.53
23957239--23957282
22
2.0
22
86
8
63
43
11
11
34
1.77
23960721--23960764
22
2.0
22
90
0
70
43
2
11
43
1.53
23966706--23966731
7
3.7
7
100
0
52
53
0
0
46
1.00
23966688--23966743
18
3.4
18
70
27
52
46
0
7
46
1.30
23967529--23967602
22
3.4
21
75
15
78
45
6
0
47
1.29
23967571--23967639
30
2.3
29
85
4
93
46
4
0
49
1.21
23967590--23967660
22
3.2
21
70
20
56
45
2
1
50
1.25
23967525--23967615
44
2.1
44
84
9
118
45
5
0
49
1.25
23967588--23967649
30
2.1
30
81
6
72
50
3
0
46
1.17
23967590--23967726
66
2.1
66
82
5
161
42
3
2
51
1.34
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23967600--23968093
22
22.5
22
67
9
130
37
7
4
50
1.51
23967607--23967735
66
2.0
66
90
0
204
40
3
3
52
1.35
23967607--23967771
66
2.5
66
84
3
190
38
5
3
52
1.42
23967805--23967887
43
1.9
44
82
2
105
36
9
6
48
1.61
23967784--23967946
65
2.5
64
79
6
150
37
9
4
47
1.58
23968617--23968662
9
4.9
9
82
10
56
84
4
8
2
0.83
23968620--23968662
15
2.9
15
79
3
52
83
4
9
2
0.87
23968616--23968661
20
2.3
21
82
17
62
84
4
6
4
0.85
23968618--23968652
16
2.2
16
90
10
54
88
5
5
0
0.63
23969844--23969881
19
2.0
19
94
0
67
21
28
15
34
1.94

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195