Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167937.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_2, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35885061

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   

This is table  193  of  195  ( 23297 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35322782--35322813
5
6.4
5
92
0
55
53
0
3
43
1.16
35323548--35323572
3
8.3
3
100
0
50
0
36
0
64
0.94
35323782--35323809
2
14.0
2
100
0
56
0
50
0
50
1.00
35324087--35324112
11
2.4
11
100
0
52
34
0
0
65
0.93
35324374--35324406
5
6.4
5
93
6
57
24
0
0
75
0.80
35325008--35325048
20
2.0
20
85
0
55
53
0
0
46
1.00
35334755--35334781
3
9.0
3
100
0
54
33
0
0
66
0.92
35340930--35340964
15
2.2
16
90
5
54
31
0
0
68
0.90
35344985--35345099
60
1.9
60
87
3
169
18
31
11
39
1.86
35345782--35345837
26
2.1
27
83
3
69
51
5
7
35
1.52
35363550--35363600
25
2.0
25
96
0
93
41
7
19
31
1.80
35376784--35376828
22
2.1
22
84
12
58
60
4
0
35
1.17
35395452--35395503
22
2.4
22
79
17
63
42
1
1
53
1.23
35395491--35395548
16
3.6
16
72
23
59
46
0
0
53
1.00
35397099--35397186
43
2.0
43
100
0
176
29
4
19
46
1.69
35414088--35414112
3
8.3
3
100
0
50
64
0
0
36
0.94
35415075--35415445
109
3.5
104
88
6
534
41
3
15
39
1.64
35415526--35415617
23
3.8
23
77
9
76
54
2
4
39
1.32
35415518--35415619
49
2.1
49
82
7
120
51
3
3
40
1.39
35427362--35427524
81
2.0
82
89
3
249
19
19
14
46
1.83
35429353--35429579
114
2.0
114
85
3
305
42
8
9
39
1.67
35443395--35443433
2
20.5
2
84
10
55
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35447327--35447360
17
2.0
17
100
0
68
29
23
17
29
1.97
35456801--35456851
25
2.0
25
100
0
102
29
11
27
31
1.92
35459156--35459183
2
14.0
2
100
0
56
50
0
0
50
1.00
35460408--35460432
1
25.0
1
100
0
50
0
0
100
0
0.00
35472396--35472424
3
10.0
3
92
7
51
65
0
0
34
0.93
35472396--35472426
11
2.7
11
95
5
53
64
0
0
35
0.94
35477669--35477693
2
12.5
2
100
0
50
48
0
0
52
1.00
35477872--35477955
28
3.0
28
78
19
102
40
0
0
59
0.97
35477901--35477966
22
3.0
22
72
10
55
43
0
0
56
0.99
35477935--35477975
17
2.5
17
88
4
57
51
0
0
48
1.00
35477985--35478062
30
2.6
29
86
9
104
56
0
2
41
1.13
35486219--35486248
2
15.0
2
100
0
60
50
0
0
50
1.00
35492897--35492929
5
7.0
5
86
13
52
0
42
0
57
0.98
35506237--35506281
21
2.1
21
87
0
63
4
6
4
84
0.87
35509182--35509206
2
12.5
2
100
0
50
52
0
0
48
1.00
35511759--35511788
13
2.3
13
94
0
51
86
3
0
10
0.67
35516132--35516161
3
10.0
3
92
0
51
63
0
3
33
1.11
35517202--35517241
2
20.0
2
100
0
80
50
0
0
50
1.00
35517812--35517859
24
2.0
23
84
4
60
41
2
2
54
1.24
35536420--35536475
27
2.1
27
89
0
85
42
16
8
32
1.79
35544940--35545121
59
3.0
58
76
12
147
51
4
7
35
1.52
35545498--35545540
21
2.0
21
86
4
59
53
4
0
41
1.21
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35559341--35559472
69
1.9
69
85
3
185
31
24
20
24
1.98
35561839--35561869
16
1.9
16
93
0
53
83
0
12
3
0.75
35561964--35561991
2
14.0
2
100
0
56
0
50
0
50
1.00
35574415--35574456
2
21.0
2
90
0
66
52
0
2
45
1.13
35581141--35581189
2
24.5
2
95
0
89
46
0
0
53
1.00
35590929--35590957
2
14.5
2
100
0
58
0
48
0
51
1.00
35590967--35591032
2
33.5
2
77
8
64
46
1
1
50
1.20
35592946--35592970
2
12.5
2
100
0
50
52
0
0
48
1.00
35592970--35593000
2
15.5
2
100
0
62
51
0
48
0
1.00
35593880--35593957
39
2.0
39
94
0
138
26
7
35
29
1.84
35602381--35602409
2
15.0
2
92
7
51
48
0
0
51
1.00
35602531--35602597
27
2.5
27
87
0
98
41
0
8
49
1.34
35603906--35603931
2
13.0
2
100
0
52
0
0
50
50
1.00
35604689--35604715
3
9.0
3
100
0
54
33
0
0
66
0.92
35610212--35610238
4
6.8
4
100
0
54
0
25
22
51
1.48
35615723--35615761
2
19.5
2
91
0
60
43
0
2
53
1.14
35620698--35620747
27
2.0
25
88
11
75
10
24
0
66
1.22
35631165--35631216
2
26.5
2
84
11
72
48
0
1
50
1.12
35631161--35631208
24
2.0
24
100
0
96
45
0
4
50
1.21
35634623--35634655
2
16.5
2
93
0
57
51
0
3
45
1.16
35637195--35637223
2
14.5
2
100
0
58
0
48
0
51
1.00
35637223--35637255
2
16.5
2
100
0
66
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35644241--35644288
18
2.7
18
80
0
51
8
18
12
60
1.57
35644241--35644283
6
7.2
6
89
0
50
6
16
13
62
1.51
35645001--35645043
4
9.6
5
95
5
51
0
16
0
83
0.64
35647113--35647159
5
9.4
5
97
0
67
44
0
55
0
0.99
35647116--35647173
5
11.6
5
90
0
53
53
0
44
1
1.10
35654911--35654939
2
14.5
2
100
0
58
0
48
0
51
1.00
35655860--35655919
31
1.9
32
89
3
95
50
5
6
38
1.51
35657167--35657199
2
16.5
2
100
0
66
48
0
0
51
1.00
35659262--35659290
5
5.8
5
100
0
58
41
37
0
20
1.53
35664400--35664431
3
10.7
3
93
0
55
71
0
0
28
0.86
35668384--35668430
2
23.5
2
100
0
94
0
51
0
48
1.00
35668889--35668950
4
15.5
4
89
0
70
50
6
3
40
1.44
35668889--35668950
6
10.3
6
82
0
70
50
6
3
40
1.44
35674806--35674849
15
2.8
16
80
16
56
27
0
0
72
0.85
35674892--35674917
11
2.4
11
100
0
52
38
0
0
61
0.96
35687018--35687404
190
2.0
192
93
1
661
37
15
18
29
1.91
35690943--35691200
127
2.0
127
96
0
480
33
24
20
22
1.97
35692564--35692594
3
10.3
3
100
0
62
67
0
32
0
0.91
35693656--35693699
16
2.7
16
78
3
52
20
4
2
72
1.13
35694501--35694525
13
1.9
13
100
0
50
8
0
4
88
0.64
35694487--35694528
21
2.0
21
100
0
84
9
0
4
85
0.72
35694493--35694545
21
2.5
21
87
0
70
7
5
3
83
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35694838--35694868
2
15.5
2
100
0
62
51
0
0
48
1.00
35695709--35695737
2
14.5
2
100
0
58
48
0
51
0
1.00
35701143--35701178
6
6.0
6
93
0
63
52
16
16
13
1.74
35706791--35706869
11
6.6
11
69
21
52
44
0
5
50
1.24
35714224--35714263
10
4.0
10
83
0
53
32
40
27
0
1.57
35714224--35714263
15
2.7
15
84
11
55
32
40
27
0
1.57
35723021--35723054
2
17.0
2
93
0
59
47
0
2
50
1.16
35723054--35723092
2
19.5
2
100
0
78
51
0
48
0
1.00
35725688--35725736
23
2.1
23
81
7
55
34
4
2
59
1.28
35727689--35727724
17
2.2
16
90
5
54
77
5
2
13
1.05
35729603--35729629
13
2.1
13
100
0
54
29
7
14
48
1.71
35729816--35729852
14
2.6
14
84
16
58
54
0
40
5
1.24
35730179--35730226
25
1.9
25
83
8
62
47
4
8
39
1.53
35731615--35731659
17
2.8
17
81
15
51
20
0
4
75
0.97
35731747--35731783
13
3.0
13
88
7
51
16
0
0
83
0.64
35731748--35731793
22
2.1
21
84
11
58
15
2
0
82
0.76
35731745--35731793
18
2.6
18
83
9
62
16
4
0
79
0.88
35731755--35731793
9
4.2
9
90
3
60
12
2
0
84
0.72
35731976--35732037
25
2.5
25
77
15
65
54
12
4
27
1.58
35732684--35732729
22
2.0
23
83
8
58
32
2
4
60
1.28
35733080--35733119
13
2.9
15
78
14
50
22
0
2
75
0.93
35733073--35733122
21
2.4
21
86
0
73
18
0
4
78
0.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35733142--35733327
4
46.8
4
70
17
77
30
3
2
63
1.24
35733142--35733327
22
8.7
21
71
19
102
30
3
2
63
1.24
35733179--35733329
42
3.6
42
82
4
162
31
3
1
62
1.25
35733169--35733327
18
8.4
18
71
16
81
32
3
1
62
1.24
35733268--35733382
42
2.7
41
82
6
124
26
6
2
64
1.30
35733281--35733385
21
4.9
20
73
12
68
26
6
2
63
1.33
35734205--35734229
13
1.9
13
100
0
50
20
32
32
16
1.94
35734244--35734281
19
2.0
19
85
10
51
31
0
5
63
1.17
35734296--35734355
6
9.7
6
73
20
52
15
3
0
81
0.81
35734297--35734355
5
11.8
5
80
12
68
15
3
0
81
0.82

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195