Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167937.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_2, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35885061

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   

This is table  8  of  195  ( 23297 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1506408--1506456
21
2.3
22
92
3
82
51
0
0
48
1.00
1506818--1506846
11
2.7
11
94
5
51
37
0
0
62
0.96
1507687--1507761
34
2.2
34
80
4
80
25
1
6
66
1.24
1508833--1508889
25
2.2
26
81
12
73
50
0
1
47
1.11
1508828--1508902
8
8.1
9
75
21
59
52
0
1
46
1.09
1517911--1517935
12
2.1
12
100
0
50
32
0
0
68
0.90
1524126--1524177
2
26.0
2
100
0
104
50
0
50
0
1.00
1531803--1531844
21
2.0
21
100
0
84
19
14
33
33
1.91
1532337--1532374
20
1.9
20
88
0
58
63
0
0
36
0.95
1532497--1532553
27
2.1
27
83
3
71
36
0
0
63
0.95
1532495--1532562
20
3.4
21
82
11
72
35
0
0
64
0.94
1532787--1532832
23
2.0
24
86
4
67
63
6
10
19
1.48
1533394--1533467
15
4.9
15
78
15
80
36
0
0
63
0.95
1533396--1533454
29
2.0
29
81
12
68
35
0
0
64
0.94
1533376--1533459
38
2.3
35
80
13
89
35
0
0
64
0.94
1534652--1534688
15
2.5
15
90
0
56
45
0
0
54
1.00
1539685--1539711
2
13.5
2
100
0
54
48
0
0
51
1.00
1541849--1541886
18
2.1
19
90
5
60
86
0
13
0
0.56
1542342--1542600
144
1.8
142
80
8
314
29
10
10
49
1.71
1544605--1544657
28
1.9
28
84
3
72
56
3
16
22
1.56
1546010--1546061
22
2.5
22
81
6
63
46
1
3
48
1.31
1554671--1554733
20
3.3
18
82
12
65
76
3
1
19
1.01
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1554674--1554770
14
6.9
14
69
8
54
75
3
2
19
1.04
1555585--1555626
14
3.1
14
83
13
52
76
4
0
19
0.96
1555602--1555639
13
2.7
14
88
8
51
78
0
2
18
0.86
1557417--1557458
21
2.0
21
100
0
84
28
9
23
38
1.86
1557465--1557499
2
17.5
2
87
0
52
42
0
0
57
0.99
1560699--1560741
19
2.4
19
84
7
54
58
0
6
34
1.25
1565012--1565092
27
3.0
27
96
0
153
27
7
17
48
1.73
1575028--1575060
15
2.3
15
89
5
50
39
0
3
57
1.14
1578632--1578685
11
4.9
11
75
6
56
40
1
1
55
1.21
1578720--1578774
29
1.9
29
88
3
85
45
0
1
52
1.11
1581313--1581338
1
26.0
1
100
0
52
0
0
0
100
0.00
1592582--1592697
8
14.8
8
89
8
177
74
0
12
12
1.08
1592582--1592697
15
7.4
15
87
10
162
74
0
12
12
1.08
1592583--1592697
23
4.9
23
88
10
171
73
0
13
13
1.09
1593706--1594032
80
4.1
80
86
7
450
22
16
22
38
1.92
1593706--1594032
39
8.1
40
87
6
414
22
16
22
38
1.92
1593706--1594032
119
2.7
119
91
1
528
22
16
22
38
1.92
1594039--1594126
8
11.5
8
81
10
96
87
10
1
1
0.65
1594042--1594126
9
9.7
9
83
10
97
87
10
1
1
0.67
1594039--1594118
1
80.0
1
78
0
79
88
8
1
1
0.62
1594041--1594118
10
7.7
10
81
16
90
88
8
1
1
0.63
1594321--1594369
16
2.7
19
78
15
59
32
0
6
61
1.21
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1595393--1595439
25
1.9
25
82
4
60
6
8
6
78
1.08
1595540--1596153
57
10.3
57
83
10
793
45
7
13
33
1.72
1595539--1596340
118
6.9
115
82
12
935
44
7
13
33
1.73
1596153--1596340
59
3.2
56
81
13
200
43
8
14
34
1.76
1597582--1597623
20
2.1
20
90
0
66
57
16
4
21
1.58
1597813--1597843
14
2.3
14
94
5
55
70
6
0
22
1.09
1598974--1599035
27
2.3
26
91
8
99
48
0
0
51
1.00
1598983--1599065
27
3.0
28
82
10
100
46
0
0
53
1.00
1600096--1600143
20
2.5
19
80
10
53
43
6
0
50
1.27
1605450--1605495
24
1.9
24
86
8
67
52
4
0
43
1.21
1606053--1606095
14
3.0
15
86
6
54
41
0
2
55
1.12
1606138--1606201
31
2.0
33
82
11
80
50
1
0
48
1.10
1608502--1608562
4
15.5
4
89
3
52
49
9
0
40
1.36
1609256--1609287
2
16.0
2
100
0
64
50
0
0
50
1.00
1625941--1626490
284
1.9
289
85
5
763
23
15
20
39
1.91
1632891--1632948
18
3.1
19
80
14
68
34
0
0
65
0.93
1633541--1633588
12
3.9
12
82
17
55
33
0
0
66
0.92
1633556--1633620
6
11.8
6
77
12
61
32
0
1
66
1.01
1633556--1633610
16
3.4
16
80
9
76
32
0
1
65
1.03
1633535--1633642
44
2.5
41
76
17
105
37
0
0
62
1.02
1633539--1633620
10
7.6
11
71
14
55
32
0
1
65
1.00
1639678--1639713
2
18.0
2
88
0
54
47
2
0
50
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1643110--1643171
32
1.9
32
83
6
81
62
0
0
37
0.95
1643400--1643449
22
2.3
21
86
10
66
58
2
0
40
1.10
1643400--1643449
21
2.3
22
86
10
68
58
2
0
40
1.10
1645030--1645069
15
2.6
16
80
19
57
20
0
0
80
0.72
1645031--1645068
7
5.1
7
90
9
58
18
0
0
81
0.69
1646016--1646056
7
5.6
7
86
11
55
31
0
0
68
0.90
1646016--1646056
15
2.8
14
85
10
55
31
0
0
68
0.90
1646518--1646571
15
3.4
16
82
10
67
51
1
0
46
1.11
1646530--1646579
15
3.2
15
85
5
64
52
4
2
42
1.31
1646538--1646601
22
2.8
22
78
4
65
53
4
4
37
1.43
1647692--1647716
3
8.3
3
100
0
50
36
0
0
64
0.94
1657689--1657713
4
6.2
4
100
0
50
28
0
0
72
0.86
1666178--1666220
5
8.6
5
80
10
52
55
0
2
41
1.12
1666171--1666248
25
3.2
25
82
12
90
48
0
2
48
1.15
1666673--1666703
6
5.0
6
96
4
53
35
0
0
64
0.94
1668250--1668276
13
2.1
13
100
0
54
37
0
62
0
0.95
1668880--1668916
14
2.6
15
83
12
51
62
0
0
37
0.96
1669037--1669071
16
2.2
16
89
0
52
0
22
0
77
0.78
1669257--1669296
14
2.6
16
84
15
57
52
2
0
45
1.14
1669272--1669330
30
1.9
31
82
3
75
44
1
0
54
1.10
1679696--1679729
16
2.1
16
88
5
50
52
0
8
38
1.33
1685450--1685487
20
1.9
20
84
10
51
36
5
0
57
1.21
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1685918--1685956
11
3.5
11
82
3
51
58
0
0
41
0.98
1687342--1687607
72
3.7
71
81
4
248
23
17
21
37
1.93
1692138--1692174
18
2.1
19
85
10
51
32
0
0
67
0.91
1692456--1692500
19
2.4
19
85
10
58
31
4
0
64
1.13
1693918--1693997
41
2.0
40
80
14
92
42
0
2
55
1.13
1694583--1694648
15
4.3
16
73
21
61
48
0
0
51
1.00
1695451--1695488
12
2.8
13
85
14
51
76
2
0
21
0.91
1714774--1714812
19
2.1
19
85
9
53
41
7
20
30
1.80
1718033--1718057
3
8.3
3
100
0
50
32
0
0
68
0.90
1718992--1719083
16
5.8
16
69
0
67
40
4
6
48
1.49
1722480--1722518
2
19.5
2
94
0
69
46
0
0
53
1.00
1724791--1724827
4
9.2
4
93
0
65
0
21
0
78
0.75
1725289--1725321
2
16.5
2
100
0
66
51
0
0
48
1.00
1725401--1725425
7
3.6
7
100
0
50
0
12
0
88
0.53
1728096--1728129
16
2.1
16
100
0
68
20
17
29
32
1.96
1741270--1741301
14
2.3
14
94
0
55
53
0
0
46
1.00
1741296--1741322
7
3.9
7
100
0
54
59
0
0
40
0.98
1742034--1742067
11
2.9
12
86
8
52
70
0
0
29
0.87
1742926--1742953
3
9.3
3
100
0
56
64
0
35
0
0.94
1743390--1743432
21
2.0
21
86
8
61
30
4
13
51
1.62
1743517--1743566
16
3.1
16
72
18
50
26
2
0
72
0.96
1743506--1743576
32
2.2
33
79
18
80
28
2
0
69
1.03
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1744777--1744825
24
2.0
25
84
4
64
36
4
2
57
1.30
1745986--1746015
2
15.0
2
100
0
60
50
0
0
50
1.00
1746186--1746240
20
2.7
20
86
10
76
25
1
1
70
1.06
1746651--1746757
51
2.1
52
84
6
139
40
13
11
35
1.80
1747056--1747089
13
2.6
13
85
0
50
14
0
11
73
1.10
1747043--1747085
19
2.3
19
83
0
59
11
2
9
76
1.10
1747342--1747381
13
3.1
12
86
13
53
42
2
7
47
1.45
1748050--1748094
19
2.4
19
80
0
54
15
2
6
75
1.11
1748076--1748106
12
2.6
12
100
0
62
22
0
6
70
1.09
1760441--1760595
39
3.9
39
80
0
166
24
10
19
45
1.81

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195