Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_D02
Parameters: 2 7 7 80 10 50 1000
Length:  67659327

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   

This is table  102  of  216  ( 25871 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31828623--31828689
13
5.2
13
70
21
52
7
13
2
76
1.12
31830199--31830245
20
2.3
20
85
0
67
21
12
36
29
1.91
31831805--31831843
13
2.9
14
92
7
71
64
0
12
23
1.28
31843218--31843256
15
2.4
15
87
12
51
10
20
2
66
1.33
31844106--31844175
30
2.3
31
80
14
92
12
11
1
74
1.14
31844222--31844265
12
3.6
12
84
6
52
18
4
4
72
1.19
31844221--31844265
13
3.6
12
82
8
54
17
4
4
73
1.17
31856684--31856745
10
5.9
10
74
10
52
33
32
3
30
1.74
31856684--31856746
21
3.0
21
88
2
90
33
33
3
30
1.74
31862983--31863022
18
2.2
18
86
4
53
12
27
0
60
1.33
31865166--31865215
20
2.3
21
86
10
66
36
34
4
26
1.75
31865761--31865811
13
3.8
13
82
12
68
23
11
0
64
1.26
31867477--31867537
10
6.1
10
74
12
54
32
13
24
29
1.93
31867478--31867538
20
3.0
20
83
9
79
32
13
26
27
1.93
31870018--31870114
30
3.2
30
72
8
99
28
16
26
27
1.97
31878309--31878571
40
6.6
40
87
3
316
26
28
20
24
1.99
31880862--31880925
12
5.6
12
76
10
53
70
3
17
9
1.27
31880884--31880985
6
16.7
6
68
14
57
71
2
18
6
1.21
31880871--31880932
18
3.6
17
77
16
67
72
3
16
8
1.21
31881000--31881062
33
1.9
33
84
12
85
55
6
25
12
1.60
31882839--31882892
20
2.7
20
82
0
63
24
20
18
37
1.94
31882839--31882912
30
2.5
30
86
8
98
21
20
18
39
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31882839--31882903
20
3.2
20
71
16
53
23
21
16
38
1.93
31894792--31894836
22
2.0
24
82
8
58
26
15
13
44
1.83
31892364--31895073
902
3.0
903
98
0
5212
31
18
18
31
1.95
31906909--31906963
27
2.0
27
100
0
110
18
34
14
32
1.91
31915567--31915627
10
6.1
10
74
12
54
32
13
24
29
1.93
31915568--31915628
20
3.0
20
83
9
79
32
13
26
27
1.93
31929975--31930026
27
1.9
27
88
0
77
71
0
19
9
1.13
31951605--31951662
15
3.5
17
83
11
75
22
10
5
62
1.47
31951700--31951752
11
4.9
11
84
11
74
16
0
7
75
1.02
31951703--31951742
20
2.0
20
95
0
71
12
0
10
77
0.99
31951703--31951738
9
3.8
9
92
7
54
11
0
8
80
0.90
31951705--31951749
20
2.2
20
88
0
63
15
0
8
75
1.03
31955541--31955587
20
2.3
20
85
0
67
29
36
12
21
1.91
31961115--31961169
15
3.6
15
95
2
92
20
14
5
60
1.54
31961211--31961248
10
3.7
10
93
6
67
18
0
7
73
1.06
31961210--31961266
11
5.0
11
80
16
71
21
0
8
70
1.14
31961207--31961266
12
5.2
12
82
11
72
23
0
8
68
1.16
31962256--31962302
23
2.1
23
84
7
62
51
12
4
31
1.59
31963692--31963749
18
3.2
18
80
4
62
63
0
25
10
1.26
31966910--31966954
20
2.3
19
84
7
54
31
11
33
24
1.90
31974622--31975277
324
2.0
322
97
0
1249
23
16
17
42
1.88
31977672--31977706
13
2.7
13
90
0
52
45
0
11
42
1.40
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31977928--31977991
23
2.8
23
90
4
94
23
10
20
45
1.82
31979697--31979737
19
2.2
20
86
8
59
63
2
14
19
1.41
31979893--31979959
23
2.9
23
95
0
116
35
4
29
29
1.77
31980039--31980073
11
3.0
12
83
8
54
25
17
28
28
1.97
32003148--32003210
21
3.0
21
88
2
90
30
3
33
33
1.74
32015421--32015464
22
2.0
22
95
0
79
25
38
4
31
1.76
32016304--32016356
27
2.0
27
85
7
72
50
13
7
28
1.68
32017149--32017195
25
1.9
24
82
4
58
53
10
17
19
1.72
32018218--32018264
25
1.9
24
82
4
58
53
10
17
19
1.72
32023647--32023708
10
5.9
10
74
10
52
33
32
3
30
1.74
32023647--32023710
21
3.0
21
88
2
92
34
32
3
29
1.73
32024053--32024114
31
2.0
31
100
0
124
22
25
12
38
1.90
32024567--32024604
10
3.7
10
86
6
58
78
7
0
13
0.94
32024567--32024605
11
3.6
11
86
6
53
79
7
0
12
0.93
32035283--32035317
18
1.9
18
88
11
54
22
20
0
57
1.41
32042439--32042495
30
1.9
30
82
7
71
42
15
10
31
1.81
32052783--32052817
16
2.3
16
90
9
56
77
5
2
14
1.07
32052783--32052822
15
2.7
15
88
3
55
67
7
5
20
1.34
32052852--32052904
14
4.0
13
90
4
72
64
0
11
24
1.26
32052852--32052905
13
4.0
14
88
7
85
64
0
11
24
1.25
32057577--32057630
28
1.9
28
85
7
74
25
5
14
53
1.63
32061872--32061906
18
1.9
18
88
11
54
22
20
0
57
1.41
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32062798--32062839
12
3.6
12
83
6
59
11
0
4
83
0.79
32062798--32062839
11
3.7
11
90
6
66
11
0
4
83
0.79
32068523--32068601
21
3.7
22
76
10
67
64
0
24
11
1.26
32068600--32068668
34
2.0
35
86
5
97
49
7
28
14
1.70
32082462--32082551
36
2.5
36
90
0
144
12
27
15
44
1.82
32085340--32085380
21
2.0
21
85
0
55
9
24
0
65
1.22
32101915--32101980
33
2.0
34
85
8
91
27
24
16
31
1.96
32101919--32101991
33
2.2
33
80
7
85
28
21
15
34
1.94
32113139--32113183
20
2.2
20
85
14
58
28
4
13
53
1.59
32115538--32115590
23
2.4
22
75
9
54
9
18
1
69
1.25
32115583--32115622
18
2.2
18
86
0
53
7
25
2
65
1.32
32120075--32120099
8
3.1
8
100
0
50
24
0
0
76
0.80
32128128--32128152
12
2.1
12
100
0
50
32
8
16
44
1.76
32134088--32134112
12
2.1
12
100
0
50
32
8
16
44
1.76
32139495--32139542
21
2.4
21
86
10
66
75
2
18
4
1.07
32145779--32145835
21
2.7
21
76
7
53
10
26
1
61
1.38
32148676--32148908
45
5.2
45
94
0
385
25
20
15
38
1.92
32154950--32155043
46
2.0
46
91
4
154
23
18
23
35
1.96
32167929--32168100
84
2.0
85
89
1
265
37
26
21
14
1.92
32181977--32182012
18
2.0
18
89
10
56
44
33
11
11
1.75
32183713--32183748
17
2.1
18
94
5
65
72
0
5
22
1.05
32185333--32185385
23
2.4
22
76
20
56
9
18
1
69
1.25
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32195061--32195106
19
2.3
20
81
3
58
19
13
36
30
1.90
32202243--32202305
21
3.0
21
88
2
90
30
3
33
33
1.74
32204138--32204406
132
2.0
132
99
0
531
33
15
21
29
1.94
32224104--32224161
10
5.7
10
76
11
64
27
27
15
29
1.96
32224104--32224164
20
3.0
20
83
9
79
26
26
14
32
1.95
32228010--32228127
55
2.1
55
84
6
159
25
22
13
38
1.90
32228750--32228804
20
2.8
20
88
0
83
29
16
29
25
1.97
32234824--32234886
21
3.0
21
83
2
81
30
4
33
31
1.78
32235741--32235801
10
6.1
10
74
12
54
32
13
24
29
1.93
32235742--32235802
20
3.0
20
83
9
79
32
13
26
27
1.93
32237453--32237484
12
2.7
12
95
0
55
18
21
0
59
1.38
32237466--32237527
27
2.3
27
83
10
74
9
19
1
69
1.25
32237490--32237609
12
10.0
12
69
19
63
8
19
3
69
1.29
32237468--32237526
14
4.3
14
74
16
52
10
16
1
71
1.22
32237533--32237591
18
3.3
18
80
0
73
5
16
6
71
1.26
32237488--32237595
6
17.7
6
68
5
65
6
19
3
70
1.25
32238637--32238698
19
3.6
18
66
29
53
3
16
4
75
1.10
32238640--32238712
34
2.2
32
80
11
76
6
13
5
73
1.21
32239978--32240038
10
6.1
10
74
12
54
32
13
24
29
1.93
32239979--32240039
20
3.0
20
83
9
79
32
13
26
27
1.93
32241754--32241806
23
2.4
22
76
20
56
9
18
1
69
1.25
32265258--32265297
18
2.2
18
86
4
53
12
27
0
60
1.33
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32266352--32266401
13
4.0
12
84
7
64
20
12
0
68
1.21
32266442--32266482
11
3.6
11
83
6
55
12
4
9
73
1.24
32266441--32266486
12
3.9
12
91
5
76
13
6
10
69
1.35
32279145--32279184
18
2.2
18
86
4
53
12
27
0
60
1.33
32281311--32281340
11
2.7
11
89
0
51
80
6
0
13
0.91
32281311--32281378
12
5.4
12
74
19
50
75
4
5
14
1.16
32281320--32281368
13
3.5
13
79
15
62
75
4
4
16
1.11
32286588--32286640
14
3.9
14
90
4
83
24
11
0
64
1.26
32286680--32286719
11
3.6
11
89
0
62
12
5
10
72
1.26
32286679--32286723
12
3.9
12
85
11
67
13
6
11
68
1.37

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216