Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: Gbar_D02 Parameters: 2 7 7 80 10 50 1000 Length: 67659327

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   

This is table  178  of  216  ( 25871 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55605180--55605206
13
2.1
13
100
0
54
14
14
40
29
1.86
55614706--55614732
14
1.9
14
100
0
54
29
0
7
62
1.22
55615261--55615299
16
2.4
16
95
0
69
38
7
25
28
1.83
55615281--55615373
44
2.1
44
90
6
143
32
4
26
36
1.76
55615281--55615385
44
2.5
41
77
18
110
32
3
26
37
1.75
55615526--55615560
17
2.1
17
94
0
61
65
2
0
31
1.07
55622618--55622670
27
2.0
27
85
7
72
16
20
18
43
1.88
55624629--55624673
17
2.6
17
96
0
81
28
31
2
37
1.69
55630991--55631019
4
7.2
4
100
0
58
51
0
0
48
1.00
55632728--55632864
54
2.5
55
83
4
170
30
19
13
36
1.90
55644610--55644641
9
3.4
9
91
8
55
62
9
12
15
1.54
55644608--55644638
10
3.2
10
90
9
55
61
9
9
19
1.54
55647047--55647071
12
2.1
12
100
0
50
60
8
16
16
1.58
55648115--55648310
32
6.2
32
86
0
232
37
19
20
22
1.94
55648128--55648318
64
3.0
64
85
0
256
36
18
20
24
1.95
55648130--55648310
96
1.9
96
87
0
263
36
19
20
23
1.95
55648320--55648373
26
2.1
26
82
0
63
40
24
18
16
1.90
55648489--55648574
24
3.6
24
79
3
84
48
20
4
25
1.69
55648567--55648748
53
3.4
53
81
6
197
25
25
20
28
1.99
55648592--55648752
80
2.0
80
89
2
243
22
27
20
29
1.99
55648592--55648752
27
6.0
27
88
2
236
22
27
20
29
1.99
55661110--55661249
54
2.6
54
85
6
169
40
22
17
20
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55661110--55661218
27
4.0
27
89
0
164
42
22
17
18
1.89
55661117--55661253
27
5.1
28
80
8
92
40
21
16
22
1.91
55661617--55661693
28
2.8
28
88
4
111
27
23
22
27
1.99
55664200--55664253
18
3.0
18
100
0
108
0
61
0
38
0.96
55664198--55664253
6
9.2
6
90
2
85
0
60
0
39
0.97
55667980--55668027
19
2.4
21
79
6
55
60
2
4
33
1.27
55668014--55668065
20
2.8
18
80
11
59
51
0
3
44
1.19
55668020--55668068
20
2.5
20
86
0
71
51
0
4
44
1.20
55668156--55668196
20
2.0
20
90
0
64
43
17
12
26
1.84
55668592--55668644
21
2.5
21
87
0
70
30
33
9
26
1.88
55670627--55670664
2
19.0
2
100
0
76
50
50
0
0
1.00
55675507--55675719
36
5.1
45
74
20
228
36
13
21
29
1.91
55675507--55675719
82
2.6
81
93
2
356
36
13
21
29
1.91
55677265--55677420
42
3.7
42
85
5
188
41
17
23
17
1.91
55679793--55679829
3
12.7
3
88
5
58
62
0
2
35
1.10
55681013--55681049
9
4.1
9
92
0
65
45
13
10
29
1.77
55683824--55684121
50
5.8
50
82
3
301
24
28
18
27
1.98
55683824--55684122
150
2.0
152
82
5
361
24
28
18
28
1.98
55685782--55686468
43
15.9
43
79
3
628
40
21
16
21
1.91
55685782--55686468
130
5.3
128
85
3
675
40
21
16
21
1.91
55685782--55686495
87
8.3
85
77
7
514
40
21
16
21
1.92
55687390--55687417
13
2.2
13
100
0
56
67
7
7
17
1.37
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55696910--55696941
12
2.7
12
90
0
55
43
15
25
15
1.86
55712540--55712587
22
2.2
22
84
0
60
37
20
16
25
1.93
55724181--55724214
12
2.8
12
87
12
52
17
0
26
55
1.42
55728481--55728543
24
2.5
24
75
7
56
36
20
25
17
1.94
55732507--55732645
46
3.0
46
90
2
217
29
24
9
36
1.87
55733872--55733904
17
1.9
17
93
0
57
60
15
0
24
1.35
55742663--55742801
25
5.6
25
82
0
152
25
14
25
35
1.93
55742671--55742801
50
2.6
50
87
0
181
25
13
25
35
1.93
55751155--55751266
42
2.6
42
95
1
197
35
17
8
38
1.80
55752892--55752927
16
2.2
17
90
5
56
16
2
25
55
1.55
55752934--55752968
6
5.7
6
89
3
52
20
0
14
65
1.26
55755060--55755233
77
2.3
77
83
2
224
20
8
21
49
1.74
55755921--55756011
21
4.3
21
79
5
94
39
35
14
10
1.81
55756790--55756913
36
3.2
36
65
18
97
49
23
8
19
1.75
55756842--55756872
16
1.9
16
93
0
53
41
29
9
19
1.83
55756747--55756993
79
3.1
79
94
0
431
45
22
10
21
1.82
55758560--55758648
25
3.6
25
70
16
62
31
23
25
19
1.98
55758581--55758648
25
2.8
25
73
4
68
32
22
27
17
1.96
55758641--55758699
26
2.3
26
82
2
75
37
18
23
20
1.94
55774899--55774935
16
2.5
15
87
12
51
78
0
18
2
0.87
55775573--55775645
33
2.1
35
85
12
107
46
1
2
49
1.24
55777098--55777202
34
3.1
34
74
8
115
45
1
22
29
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55777730--55777760
14
2.2
14
94
0
53
29
3
6
61
1.37
55779517--55779828
96
3.3
95
81
5
351
40
3
17
38
1.66
55779899--55780161
126
2.1
126
90
2
422
35
15
20
28
1.93
55781465--55781658
61
3.3
59
71
17
188
45
5
5
43
1.49
55782120--55782162
18
2.4
18
80
0
50
44
9
25
20
1.81
55782774--55782857
7
11.6
7
92
7
141
55
15
0
28
1.40
55784034--55784073
13
3.3
13
73
20
50
50
0
27
22
1.50
55784030--55784081
23
2.4
21
87
12
86
46
0
25
28
1.53
55785647--55785671
5
5.0
5
100
0
50
80
0
0
20
0.72
55794976--55795032
28
2.0
28
82
0
69
38
36
5
19
1.74
55794988--55795055
28
2.4
27
80
9
75
35
38
5
20
1.77
55807878--55807988
55
2.0
55
100
0
222
36
1
12
49
1.51
55808089--55808347
29
8.9
29
72
7
159
36
13
24
24
1.92
55808172--55808383
87
2.4
86
80
2
217
38
13
24
23
1.91
55808089--55808297
116
1.8
116
86
0
301
38
14
24
22
1.92
55808089--55808342
116
2.2
116
81
2
287
36
14
24
24
1.93
55813761--55813799
20
1.9
20
84
5
51
61
2
12
23
1.43
55819253--55819417
79
2.1
79
84
0
213
32
12
9
45
1.75
55838339--55838499
43
3.8
42
75
4
144
32
26
15
25
1.95
55842068--55842095
3
9.3
3
100
0
56
67
0
0
32
0.91
55846171--55846555
49
7.9
48
75
9
332
32
19
22
24
1.97
55846192--55846556
197
1.8
197
85
6
515
32
20
23
24
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55863111--55863168
27
2.2
26
81
6
62
24
8
12
55
1.64
55866561--55866674
10
12.0
9
71
15
70
33
2
3
60
1.27
55866562--55866674
19
6.0
18
72
17
86
33
2
3
60
1.28
55866723--55866807
9
9.4
9
70
21
54
31
1
1
65
1.07
55866757--55866808
17
3.1
17
83
8
70
32
0
0
67
0.91
55871850--55871887
16
2.4
16
82
4
51
81
5
13
0
0.85
55871928--55872046
56
2.1
57
93
1
204
47
6
7
37
1.58
55874515--55874695
91
2.0
91
85
2
247
32
11
13
43
1.80
55875538--55875575
16
2.4
16
86
4
51
34
5
5
55
1.45
55876245--55876319
30
2.5
31
84
6
100
24
18
9
48
1.77
55877860--55877945
43
2.0
43
86
0
118
51
2
22
24
1.60
55877920--55877960
19
2.2
19
91
4
66
53
0
21
24
1.46
55879252--55879348
49
2.0
49
89
0
149
43
6
24
25
1.77
55886743--55886778
18
1.9
19
88
5
56
52
0
2
44
1.15
55891057--55891148
45
2.0
45
100
0
184
27
15
30
27
1.96
55891542--55891704
87
1.9
86
87
6
240
26
13
21
38
1.90
55894093--55894192
42
2.4
42
81
3
121
18
24
15
43
1.87
55894143--55894217
21
3.6
21
72
0
69
14
25
18
41
1.89
55894127--55894222
42
2.3
42
85
1
122
13
25
17
43
1.85
55898398--55898441
23
1.9
23
85
0
61
50
0
6
43
1.29
55900296--55900385
42
2.2
41
78
9
94
23
27
27
21
1.99
55903045--55903096
25
2.1
25
96
0
95
40
13
3
42
1.62
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55903053--55903106
25
2.2
25
89
0
81
40
11
3
44
1.58
55908405--55908444
3
13.3
3
94
0
71
65
0
2
32
1.06
55908539--55908576
19
2.0
19
90
10
60
26
5
18
50
1.68
55911409--55911466
28
2.1
27
87
3
80
29
25
22
22
1.99
55911575--55911632
26
2.2
26
78
0
62
39
18
18
22
1.92
55911864--55912033
81
2.1
81
89
4
254
22
14
18
44
1.86
55911827--55912033
27
7.6
27
77
9
181
21
14
18
45
1.84
55912340--55912615
27
10.2
27
80
5
180
22
14
16
46
1.83
55912354--55912615
54
4.8
54
80
6
269
21
14
17
46
1.83
55912356--55912615
81
3.2
80
82
5
299
21
14
16
47
1.82

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216