Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_D02
Parameters: 2 7 7 80 10 50 1000
Length:  67659327

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   

This is table  213  of  216  ( 25871 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65976508--65976570
12
5.2
12
72
16
58
36
0
0
63
0.95
65976507--65976570
9
7.2
9
72
20
55
35
0
0
64
0.94
65977900--65977962
29
2.2
30
91
5
103
63
0
0
36
0.95
65978051--65978092
20
2.1
21
86
8
61
21
4
2
71
1.16
65978052--65978174
63
1.9
64
85
9
171
28
4
2
65
1.24
65978059--65978174
9
12.6
9
67
21
62
28
3
2
65
1.22
65978057--65978111
10
5.6
10
72
12
51
27
1
3
67
1.17
65981728--65981776
25
2.0
25
83
0
62
44
8
12
34
1.71
65984561--65984671
55
2.0
55
96
0
204
45
14
10
29
1.79
65987477--65987516
13
2.9
13
82
13
53
35
0
0
65
0.93
65987478--65987523
18
2.6
17
82
3
56
34
0
2
63
1.07
65995643--65995690
23
2.0
24
92
4
80
60
16
8
14
1.57
66009055--66009106
24
2.1
25
85
3
70
44
0
3
51
1.19
66009085--66009156
20
3.7
19
87
7
92
36
1
6
55
1.35
66009071--66009155
39
2.1
41
85
14
115
40
1
5
52
1.33
66016216--66016286
33
2.2
33
80
14
76
36
36
14
12
1.84
66019870--66019911
4
11.0
4
85
10
61
50
26
0
23
1.50
66019873--66019909
18
2.1
18
94
0
65
51
24
0
24
1.49
66019870--66019911
22
1.9
22
95
0
75
50
26
0
23
1.50
66021579--66021618
21
1.9
21
89
0
62
10
7
12
70
1.35
66030140--66030238
31
3.3
29
75
16
78
39
14
9
37
1.77
66030131--66030219
31
3.0
30
80
8
83
41
13
8
35
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66034393--66034425
16
2.1
16
88
11
50
48
0
9
42
1.35
66037951--66038255
86
3.6
83
79
6
321
34
5
26
33
1.80
66038298--66038345
24
2.0
24
100
0
96
33
4
25
37
1.75
66040780--66040860
4
20.8
4
82
5
103
44
29
2
23
1.66
66043591--66043652
21
3.2
21
60
21
53
51
9
20
17
1.73
66043584--66043658
37
2.0
37
100
0
150
46
10
21
21
1.81
66048290--66048342
26
2.0
26
81
0
61
62
11
0
26
1.29
66051329--66051358
15
2.0
15
93
0
51
43
13
6
36
1.70
66051560--66051649
30
3.0
29
83
3
90
44
12
6
36
1.68
66051585--66051649
30
2.2
30
88
2
96
49
13
4
32
1.63
66055822--66055897
30
2.5
28
78
19
73
50
10
3
35
1.56
66057203--66057241
19
2.1
19
90
0
60
30
0
5
64
1.15
66061185--66061247
24
2.7
23
80
7
63
55
3
1
39
1.25
66069607--66069656
22
2.3
21
86
6
73
44
4
4
48
1.40
66073467--66073508
16
2.6
16
82
10
59
54
21
7
16
1.65
66074922--66075052
42
3.0
43
70
16
119
30
25
22
22
1.99
66075678--66076057
88
4.3
89
65
8
202
30
18
23
28
1.97
66075034--66076195
132
8.8
132
92
0
1812
29
18
24
28
1.98
66076187--66076372
44
4.2
44
85
0
219
32
12
25
29
1.92
66076379--66076624
124
2.0
125
90
2
388
27
20
23
28
1.99
66078066--66078115
15
3.5
15
80
17
54
26
6
4
64
1.35
66079808--66079849
16
2.6
16
82
10
59
54
21
7
16
1.65
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66082309--66082349
6
6.8
6
91
0
55
31
9
17
41
1.82
66083939--66083990
21
2.5
20
84
9
68
30
5
28
34
1.81
66085462--66085588
32
4.0
32
78
10
161
29
16
11
42
1.84
66085485--66085610
63
2.0
63
100
0
252
26
17
14
41
1.88
66087980--66088028
24
2.0
24
92
0
80
24
8
6
61
1.47
66101544--66101568
11
2.3
11
100
0
50
44
16
16
24
1.86
66105631--66105662
2
16.0
2
100
0
64
50
50
0
0
1.00
66105664--66105702
4
9.8
4
100
0
78
51
25
0
23
1.49
66108855--66108881
3
9.0
3
100
0
54
66
0
0
33
0.92
66113564--66113590
13
2.1
13
100
0
54
66
7
0
25
1.17
66114488--66114523
18
1.9
18
88
5
54
27
0
2
69
1.02
66118885--66118929
16
2.9
16
80
3
56
55
15
2
26
1.52
66119836--66119888
20
2.7
19
85
5
70
50
5
0
43
1.25
66119836--66119891
19
2.9
19
86
2
76
53
5
0
41
1.24
66131525--66131584
27
2.3
26
75
16
61
48
3
5
43
1.41
66132819--66132854
4
9.0
4
100
0
72
25
0
25
50
1.50
66132995--66133031
4
9.2
4
93
0
65
27
0
24
48
1.51
66133074--66133115
4
10.5
4
84
0
57
21
4
28
45
1.72
66133496--66133534
4
9.8
4
100
0
78
51
25
0
23
1.49
66140787--66140816
16
1.9
15
93
6
51
0
16
0
83
0.65
66143962--66144007
24
1.9
24
100
0
92
23
13
10
52
1.71
66162316--66162354
20
2.0
20
90
10
62
51
10
12
25
1.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66163602--66163685
41
2.0
41
93
0
141
50
8
1
40
1.40
66167394--66167471
38
2.1
38
100
0
156
33
25
7
33
1.84
66183484--66183516
10
3.3
10
95
0
57
42
27
0
30
1.56
66206367--66206569
103
2.0
103
98
0
388
43
19
17
19
1.88
66212969--66213037
32
2.2
31
82
7
77
42
8
15
33
1.78
66217202--66217232
16
2.0
16
93
6
55
54
12
12
19
1.70
66220465--66220496
7
4.4
7
96
4
55
15
0
25
59
1.36
66223373--66223403
6
5.2
6
100
0
62
51
16
0
32
1.44
66241104--66241166
33
2.0
31
81
12
74
28
14
3
53
1.56
66241674--66241720
19
2.3
20
85
7
60
51
4
0
44
1.21
66242461--66242522
31
2.0
31
84
6
81
51
3
6
38
1.44
66244393--66244427
17
2.1
17
88
0
52
40
11
22
25
1.88
66245259--66245297
19
2.0
20
90
5
62
74
0
5
20
1.01
66245601--66245644
3
14.7
3
85
0
61
6
29
0
63
1.20
66246192--66246230
21
1.9
21
89
5
62
17
12
10
58
1.61
66257312--66257358
19
2.7
17
81
12
60
74
2
10
12
1.16
66270022--66270086
21
3.2
21
73
18
66
6
49
10
33
1.63
66277774--66277821
13
3.8
13
74
20
57
58
0
0
41
0.98
66283377--66283414
20
2.0
20
89
5
60
50
2
0
47
1.15
66289066--66289568
268
1.9
268
92
0
844
33
12
16
37
1.86
66296565--66296623
30
2.0
30
86
6
84
40
0
38
20
1.53
66313911--66313986
27
2.8
27
87
0
116
18
21
36
23
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66314003--66314043
19
2.2
19
95
0
73
31
0
17
51
1.46
66314003--66314508
260
1.9
260
97
0
949
45
9
5
40
1.59
66314467--66314523
27
2.1
27
90
0
87
49
14
1
35
1.53
66314564--66314650
22
3.7
22
82
14
120
32
1
13
52
1.48
66314559--66314658
49
2.0
49
94
0
173
33
1
13
53
1.46
66314640--66314711
8
8.4
8
71
14
54
36
1
15
47
1.54
66315598--66315767
85
2.0
85
96
0
313
34
17
12
35
1.87
66327539--66327604
34
1.9
35
84
6
91
46
12
9
31
1.72
66334987--66335044
30
2.0
29
82
3
71
29
3
18
48
1.65
66347935--66347999
26
2.5
25
75
7
67
56
3
4
35
1.35
66349477--66349558
31
2.6
31
78
3
94
26
10
13
48
1.75
66351353--66351391
17
2.3
18
86
8
55
61
5
5
28
1.39
66352753--66352792
20
2.0
20
85
9
55
55
25
17
2
1.55
66360641--66360673
6
5.7
6
92
3
50
75
12
0
12
1.04
66360641--66360685
12
3.8
12
80
8
56
77
11
0
11
0.99
66362368--66362937
88
6.5
88
90
2
730
29
22
23
25
1.99
66362368--66362937
175
3.3
176
86
4
739
29
22
23
25
1.99
66363082--66363187
44
2.4
44
78
7
126
29
24
24
21
1.99
66363722--66363761
20
2.0
20
85
9
55
55
25
17
2
1.55
66368794--66368846
3
17.7
3
100
0
106
66
0
0
33
0.92
66373910--66373950
21
2.0
21
90
0
64
51
2
2
43
1.28
66373938--66373986
21
2.3
21
79
6
55
40
2
6
51
1.38
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66379171--66379235
28
2.2
30
81
5
80
43
13
6
36
1.70
66381727--66381866
69
2.0
69
93
2
237
34
15
17
32
1.91
66385542--66385574
10
3.3
10
84
16
50
30
0
0
69
0.88
66385543--66385582
20
2.1
20
86
9
57
30
0
0
70
0.88
66386992--66387016
3
8.3
3
100
0
50
32
0
0
68
0.90
66387714--66387835
31
3.9
31
70
17
99
38
15
5
40
1.71
66391998--66392037
20
2.0
20
90
0
62
30
10
10
50
1.69
66391983--66392049
34
1.9
35
87
3
100
32
8
11
46
1.72
66405898--66405932
18
1.9
18
88
0
52
28
5
42
22
1.76
66414629--66414667
18
2.2
17
86
13
53
33
0
20
46
1.51

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216