Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: Gbar_D02 Parameters: 2 7 7 80 10 50 1000 Length: 67659327

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   

This is table  143  of  216  ( 25871 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45204576--45204628
20
2.7
20
70
5
54
69
7
0
22
1.13
45205520--45205600
31
2.6
31
86
1
101
38
8
7
45
1.63
45208189--45208243
3
18.0
3
88
3
83
30
1
1
65
1.13
45210055--45210124
23
2.9
24
76
6
61
25
12
7
54
1.63
45210088--45210128
12
3.4
12
79
0
55
31
7
4
56
1.48
45214688--45214801
58
1.9
60
81
12
137
35
12
7
44
1.71
45221238--45221391
34
4.5
34
87
2
209
38
16
25
19
1.93
45221238--45221391
69
2.2
69
95
0
272
38
16
25
19
1.93
45235725--45235884
27
6.0
27
80
11
136
44
22
14
18
1.86
45237464--45237503
20
2.0
21
90
5
64
67
2
22
7
1.28
45237489--45237522
9
3.4
10
88
12
52
79
0
20
0
0.73
45237469--45237522
20
2.8
20
86
8
67
75
1
20
1
0.98
45240695--45240733
20
1.9
20
84
5
51
51
2
15
30
1.57
45241229--45241397
86
2.0
86
98
0
329
42
26
1
29
1.66
45244281--45244327
23
2.0
23
100
0
94
38
4
25
31
1.75
45244451--45244539
30
3.0
29
78
4
106
32
15
17
33
1.92
45249396--45249424
14
2.1
14
100
0
58
65
6
0
27
1.18
45254311--45254724
27
15.4
27
84
3
467
43
21
16
18
1.87
45255118--45255188
29
2.4
29
83
9
81
26
15
15
42
1.87
45255188--45255259
34
2.1
35
82
5
85
26
20
22
30
1.98
45256849--45256885
3
12.3
3
100
0
74
32
0
32
35
1.58
45257719--45257826
50
2.3
47
75
12
105
29
13
9
47
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45260147--45260185
14
2.9
14
85
14
55
69
0
7
23
1.14
45260137--45260193
19
3.2
18
82
7
62
70
0
7
22
1.11
45260133--45260184
23
2.3
23
83
9
63
67
0
5
26
1.13
45264284--45264336
20
2.7
20
84
0
79
24
41
24
9
1.84
45265105--45265170
5
12.4
5
85
9
87
42
1
0
56
1.08
45268800--45268852
26
2.0
26
85
0
70
33
18
7
39
1.79
45269277--45269354
39
2.0
39
92
0
129
51
8
8
30
1.64
45271928--45271965
20
1.9
20
100
0
76
39
21
31
7
1.82
45277597--45277638
17
2.3
18
80
16
50
30
9
9
50
1.67
45297087--45297113
9
3.0
9
100
0
54
33
22
0
44
1.53
45301494--45301518
11
2.3
11
100
0
50
36
0
16
48
1.46
45313504--45313660
43
3.7
42
76
5
145
29
15
22
31
1.95
45327565--45327731
82
2.0
82
95
0
298
35
20
10
32
1.87
45327984--45328040
16
3.6
16
92
0
87
42
7
22
28
1.80
45328024--45328112
44
2.0
45
86
6
128
32
5
24
37
1.79
45328216--45328371
58
2.7
59
81
7
176
50
3
1
44
1.26
45328284--45328322
10
3.9
10
82
0
51
53
0
0
46
1.00
45328284--45328334
20
2.4
22
90
9
88
50
1
0
47
1.12
45328581--45328619
14
2.8
14
80
0
51
41
12
10
35
1.77
45332235--45332711
111
4.4
109
80
13
493
49
8
6
35
1.59
45337597--45337638
20
2.0
22
86
9
61
26
19
30
23
1.98
45338345--45338384
19
2.0
19
85
9
53
47
5
0
47
1.24
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45338999--45339033
16
2.2
16
89
0
52
48
0
0
51
1.00
45340008--45340041
15
2.3
15
89
0
50
50
11
2
35
1.54
45355349--45355411
30
2.1
30
96
0
117
23
3
15
57
1.53
45356866--45357243
47
7.6
46
68
16
179
38
6
16
38
1.74
45357010--45357243
47
4.9
49
80
4
278
38
6
15
38
1.75
45357006--45357243
96
2.5
96
95
0
422
38
6
15
39
1.74
45357348--45357463
41
2.8
41
86
0
160
15
19
31
33
1.93
45360182--45360221
21
1.9
21
94
0
71
32
10
15
42
1.79
45362663--45362704
21
2.0
21
95
0
75
30
9
16
42
1.80
45365143--45365262
45
2.7
45
86
0
168
31
15
23
30
1.95
45365140--45365297
45
3.6
43
79
6
156
32
15
22
28
1.95
45365370--45365452
34
2.4
34
88
4
123
46
16
9
26
1.78
45365370--45365468
34
2.9
33
82
11
119
44
18
12
25
1.84
45378622--45378652
11
2.8
11
95
0
53
16
3
0
80
0.83
45385239--45385268
14
2.1
14
93
0
51
16
43
0
40
1.48
45387856--45387931
38
2.0
38
97
0
143
48
18
9
23
1.76
45390329--45390364
11
3.3
11
88
0
54
13
2
2
80
0.93
45390557--45390656
50
2.0
50
100
0
200
22
10
24
44
1.83
45395473--45395525
16
3.4
16
84
5
72
33
1
35
28
1.68
45395504--45395594
45
2.0
44
87
2
128
31
5
28
34
1.80
45395747--45395788
15
2.9
15
82
10
52
52
0
0
47
1.00
45395857--45395908
15
3.6
15
80
12
56
53
1
0
44
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45395736--45396152
120
3.5
120
94
1
721
49
5
2
42
1.38
45396093--45396374
91
3.0
93
83
7
313
48
3
2
45
1.34
45396193--45396253
28
2.2
28
85
5
81
50
3
0
45
1.17
45396200--45396343
47
3.1
46
65
23
113
49
4
2
44
1.33
45396168--45396374
91
2.3
91
90
1
324
46
4
2
45
1.37
45396193--45396335
44
3.2
43
68
16
119
48
3
2
46
1.31
45396218--45396356
47
3.0
47
68
17
137
49
4
2
43
1.34
45400018--45400056
19
2.1
19
95
0
69
43
10
46
0
1.37
45419911--45419949
20
2.0
20
84
0
51
53
0
0
46
1.00
45419922--45419990
16
4.2
16
68
15
52
44
0
2
52
1.16
45419938--45420054
61
1.9
61
87
3
173
42
0
4
52
1.27
45420038--45420076
21
1.9
20
84
5
51
38
7
7
46
1.61
45420158--45420208
25
2.0
26
81
11
61
37
7
11
43
1.71
45422793--45422831
12
3.2
12
85
7
53
74
0
7
17
1.05
45422799--45422855
16
3.6
16
81
6
64
70
0
3
26
1.03
45422797--45422839
12
3.7
11
81
9
50
72
0
4
23
1.04
45443058--45443101
14
2.8
16
86
10
56
31
0
4
63
1.14
45448119--45448164
14
3.3
14
80
16
51
58
4
0
36
1.18
45448122--45448152
16
1.9
16
93
0
53
54
3
0
41
1.16
45448248--45448303
25
2.3
25
77
17
64
51
0
1
46
1.11
45451839--45451864
13
2.0
13
100
0
52
61
15
15
7
1.55
45456148--45456212
4
15.8
4
73
23
55
24
4
0
70
1.06
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45456147--45456212
14
5.2
12
79
13
71
24
4
0
71
1.05
45467562--45467782
44
4.8
45
74
8
160
32
18
20
29
1.96
45468372--45468418
23
2.0
23
84
8
60
21
48
10
19
1.78
45468757--45468808
27
1.9
27
88
0
77
61
3
3
30
1.32
45469390--45469461
10
7.9
9
73
22
53
23
4
0
72
1.02
45469394--45469454
4
14.5
4
75
21
54
24
4
0
70
1.07
45469394--45469461
16
4.2
15
77
20
66
25
4
0
70
1.05
45469621--45469654
10
3.6
9
88
11
50
20
2
2
73
1.09
45476683--45476720
11
3.3
12
82
14
53
36
0
0
63
0.95
45476818--45476877
30
2.0
30
93
0
102
56
13
3
26
1.52
45483567--45483597
9
3.4
9
90
0
53
25
12
22
38
1.90
45483650--45483686
9
4.1
9
86
13
58
45
10
10
32
1.74
45485994--45486040
22
2.3
19
85
14
58
44
2
0
53
1.12
45485996--45486037
16
2.7
15
79
20
50
45
2
0
52
1.13
45497277--45497400
45
2.8
45
81
0
140
24
27
21
26
1.99
45497879--45498384
44
11.8
44
81
7
486
28
24
17
29
1.97
45497929--45498384
170
2.7
170
88
1
646
29
23
17
29
1.97
45497878--45498383
126
3.9
129
81
8
525
28
24
16
29
1.97
45498384--45498613
88
2.6
88
88
0
325
20
22
27
29
1.98
45498605--45498882
44
6.3
45
78
6
284
28
25
15
29
1.96
45498607--45498882
132
2.1
133
95
0
500
28
26
15
29
1.96
45500099--45500123
10
2.5
10
100
0
50
0
8
0
92
0.40
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45507823--45507869
3
15.7
3
100
0
94
65
0
0
34
0.93
45508860--45508907
19
2.6
19
80
3
53
33
4
12
50
1.59
45510438--45510521
42
2.0
42
95
0
150
29
8
13
48
1.71
45511685--45511712
13
2.2
13
100
0
56
7
39
21
32
1.80
45512165--45512224
31
1.9
31
96
0
111
30
5
13
51
1.62
45515389--45515515
59
2.1
60
90
7
197
48
15
12
22
1.79
45516547--45516599
25
2.1
25
85
0
70
41
16
1
39
1.60
45530023--45530052
16
1.9
15
93
6
51
13
13
10
63
1.52
45530591--45530620
2
15.0
2
92
0
51
46
0
0
53
1.00
45530620--45530644
2
12.5
2
100
0
50
52
0
48
0
1.00

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216