Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_D02
Parameters: 2 7 7 80 10 50 1000
Length:  67659327

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   

This is table  163  of  216  ( 25871 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51240657--51240706
15
3.3
15
80
0
55
20
10
32
38
1.85
51242419--51242478
25
2.3
26
85
2
77
28
6
13
51
1.66
51242449--51242502
28
1.9
28
88
0
81
27
5
18
48
1.70
51243176--51243227
21
2.5
21
84
6
70
38
40
11
9
1.74
51255092--51255122
10
3.1
10
95
0
53
64
19
16
0
1.29
51256747--51256785
21
2.0
20
85
10
53
30
7
2
58
1.39
51260567--51260613
9
5.0
9
82
10
58
25
0
2
72
0.96
51262204--51262246
14
3.0
14
79
3
50
18
9
13
58
1.62
51263752--51263798
21
2.2
21
80
0
58
40
2
2
55
1.24
51264036--51264071
11
3.4
11
84
7
56
36
0
2
61
1.11
51265709--51266035
109
3.0
109
85
4
442
35
16
15
32
1.90
51266232--51266286
29
1.9
27
82
10
65
70
3
3
21
1.18
51268176--51268317
44
3.2
45
67
22
118
28
23
18
29
1.98
51268222--51268359
44
3.2
42
68
22
122
27
26
16
29
1.97
51268176--51268372
88
2.2
88
94
0
340
27
23
19
29
1.98
51268092--51268511
132
3.2
128
79
11
333
28
23
17
30
1.97
51268094--51268506
220
1.9
220
92
0
700
28
23
17
29
1.97
51268222--51268527
44
7.0
42
68
19
103
27
24
17
30
1.97
51268264--51268509
132
1.9
132
92
0
420
28
23
18
28
1.98
51268543--51270492
89
21.9
89
87
0
2664
22
23
25
29
1.99
51268822--51270778
89
22.0
90
84
5
551
22
22
25
29
1.99
51275740--51276065
108
3.0
109
87
4
476
34
17
15
31
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51276234--51276259
4
6.5
4
100
0
52
73
0
0
26
0.84
51277973--51278017
21
2.1
21
83
4
54
60
6
2
31
1.35
51278836--51279127
50
5.8
50
73
0
233
26
26
19
27
1.99
51278821--51279118
100
3.0
100
88
0
425
25
26
20
27
1.99
51280613--51280643
13
2.3
14
94
5
55
0
16
0
83
0.64
51292620--51292707
30
3.1
30
81
15
98
27
25
5
42
1.77
51292654--51292704
25
2.0
25
100
0
102
23
19
7
49
1.74
51307569--51307614
22
2.1
21
84
4
56
50
0
4
45
1.21
51313116--51313208
37
2.5
35
77
16
98
41
3
2
52
1.29
51313167--51313299
61
2.2
58
84
9
171
43
3
2
50
1.32
51313167--51313325
58
2.6
60
80
11
157
43
4
3
48
1.41
51316956--51316984
7
4.3
7
95
4
51
72
0
0
27
0.85
51334450--51334609
43
3.7
44
76
14
145
23
17
28
31
1.97
51336875--51336933
28
2.0
30
83
6
77
1
25
3
69
1.13
51337944--51338056
46
2.5
46
89
0
163
19
19
15
46
1.85
51337933--51338198
45
5.8
46
76
5
182
21
18
16
42
1.89
51338623--51338653
16
1.9
16
93
0
53
32
22
0
45
1.53
51344688--51345033
45
7.6
46
77
8
241
21
18
13
45
1.84
51349294--51349333
22
1.9
21
85
10
55
42
22
10
25
1.84
51353935--51353999
17
4.5
15
66
26
50
38
0
1
60
1.07
51353936--51353970
17
2.1
16
89
5
52
31
0
2
65
1.07
51353913--51354154
120
2.0
120
96
0
450
42
2
4
51
1.32
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51354054--51354188
18
8.0
17
70
19
95
40
0
1
57
1.13
51354069--51354208
26
5.5
25
68
20
85
42
0
2
55
1.17
51354082--51354137
15
4.0
15
73
17
57
44
0
0
55
0.99
51353990--51354173
41
4.6
40
67
23
118
41
1
3
53
1.29
51354333--51354439
45
2.6
40
77
17
110
31
29
4
33
1.78
51354345--51354441
45
2.2
45
88
5
144
31
29
5
32
1.80
51354421--51354453
16
2.1
16
100
0
66
21
36
6
36
1.78
51357740--51357784
23
2.0
23
86
4
65
37
6
17
37
1.76
51367736--51367768
16
2.1
16
100
0
66
33
12
18
36
1.88
51367909--51367983
33
2.3
33
95
0
132
52
8
0
40
1.31
51371918--51371968
19
2.7
19
82
8
61
47
3
21
27
1.68
51378909--51379014
53
2.0
53
92
0
176
22
24
19
33
1.97
51382604--51383221
305
2.0
305
92
0
1011
33
19
14
32
1.92
51386530--51386576
17
2.8
17
93
0
85
25
27
6
40
1.80
51401383--51401432
17
2.9
17
93
0
91
24
26
6
44
1.76
51403455--51403689
69
3.4
69
76
2
211
37
22
17
22
1.94
51405207--51405527
69
4.7
69
85
2
394
36
22
20
20
1.95
51417228--51417289
32
1.9
32
90
6
99
22
17
29
30
1.97
51420154--51420211
28
2.1
28
100
0
116
32
18
6
41
1.78
51421001--51421055
28
2.0
26
82
6
65
20
9
9
61
1.52
51421015--51421066
27
1.9
27
84
7
70
19
5
15
59
1.56
51421015--51421066
26
2.0
27
81
11
63
19
5
15
59
1.56
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51421231--51421273
18
2.3
19
88
8
61
16
6
4
72
1.24
51421243--51421287
14
2.9
16
78
21
51
17
6
4
71
1.25
51428771--51429027
27
9.5
27
85
3
268
19
15
20
45
1.86
51428771--51429027
54
4.7
53
86
4
309
19
15
20
45
1.86
51428771--51429027
81
3.2
81
83
7
315
19
15
20
45
1.86
51428771--51429027
109
2.4
108
85
3
345
19
15
20
45
1.86
51432779--51432828
26
1.9
26
88
8
75
16
22
26
36
1.94
51432779--51432862
26
3.3
26
77
8
73
19
19
27
34
1.95
51445155--51445211
23
2.4
24
80
14
64
28
1
14
56
1.48
51453082--51453133
25
2.1
25
96
0
95
34
7
19
38
1.80
51466401--51466634
50
4.7
50
86
1
290
20
30
22
26
1.99
51468050--51468235
26
7.2
26
72
7
117
19
16
28
35
1.93
51468092--51468235
52
2.8
52
86
2
173
19
14
28
37
1.91
51468067--51468216
78
1.9
78
81
0
183
18
15
27
38
1.91
51473989--51474055
26
2.6
26
79
11
75
43
2
17
35
1.65
51476478--51476813
102
3.3
100
87
3
435
28
15
25
30
1.96
51476478--51476813
51
6.6
50
83
5
374
28
15
25
30
1.96
51480892--51481033
41
3.5
40
82
8
169
33
15
28
22
1.95
51484265--51484337
19
3.8
19
96
0
137
36
16
9
36
1.81
51489769--51489826
25
2.3
25
81
0
71
31
20
15
32
1.94
51494648--51494714
27
2.5
27
82
0
80
25
22
26
25
2.00
51494667--51494729
27
2.3
27
81
5
65
26
17
26
28
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51502055--51502086
15
2.0
17
88
11
50
43
6
6
43
1.54
51503939--51503969
15
2.1
15
93
0
53
16
3
19
61
1.48
51506743--51506816
27
2.7
27
82
0
94
25
22
16
35
1.95
51510629--51510676
14
3.2
15
79
8
53
62
2
2
33
1.18
51512343--51512431
45
2.0
45
88
0
133
28
26
15
29
1.96
51512368--51512827
44
10.6
44
69
13
242
27
25
19
28
1.99
51512548--51512827
45
6.4
43
69
17
177
26
25
20
27
1.99
51512344--51512826
216
2.2
216
91
0
761
27
24
19
28
1.98
51512637--51512791
82
1.9
82
89
2
240
27
23
21
27
1.99
51525301--51525343
17
2.4
18
81
14
54
60
4
4
30
1.37
51526897--51526949
18
2.9
18
85
0
70
22
20
20
35
1.96
51535971--51535999
5
5.8
5
100
0
58
58
41
0
0
0.98
51539052--51539135
7
12.0
7
74
9
73
15
0
39
45
1.46
51539037--51539090
27
2.0
27
82
7
65
18
0
31
50
1.48
51539052--51539135
36
2.4
34
86
7
107
15
0
39
45
1.46
51541613--51541656
14
3.4
14
75
18
58
36
0
4
59
1.18
51541609--51541661
25
2.2
25
96
3
99
33
0
3
62
1.13
51542475--51542845
9
43.4
9
64
19
93
43
17
2
35
1.64
51542505--51542840
25
13.4
25
75
10
156
44
17
2
35
1.61
51542580--51542657
41
1.9
41
89
0
120
41
14
5
39
1.67
51542621--51542740
59
2.0
59
84
9
156
45
15
2
36
1.60
51542709--51542832
16
8.0
16
68
22
68
46
16
0
35
1.53
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51542702--51542832
67
2.0
66
89
4
201
45
18
1
34
1.59
51548207--51548253
21
2.2
21
92
0
76
31
17
48
2
1.58
51548664--51548765
44
2.3
45
82
1
116
31
13
23
31
1.93
51548664--51548845
43
4.2
44
75
1
143
29
16
25
28
1.97
51551058--51551090
16
2.1
16
88
5
50
36
3
0
60
1.12
51551177--51551269
47
2.0
47
95
0
168
38
8
3
49
1.50
51555529--51555577
9
5.4
9
82
0
62
28
10
22
38
1.87
51555529--51555577
18
2.7
18
87
0
71
28
10
22
38
1.87
51555521--51555577
27
2.1
27
93
0
96
29
10
21
38
1.87
51558266--51558457
62
3.1
59
79
15
210
50
4
3
42
1.39

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216