Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: Gbar_D02 Parameters: 2 7 7 80 10 50 1000 Length: 67659327

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   

This is table  176  of  216  ( 25871 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55105390--55105653
107
2.5
107
87
6
353
50
4
1
43
1.33
55113608--55113730
30
4.1
30
91
3
194
26
23
6
43
1.77
55113609--55113728
59
2.0
60
91
1
197
25
22
6
45
1.77
55118298--55118421
30
4.1
30
93
1
203
25
24
6
43
1.78
55118308--55118415
15
7.2
15
67
12
78
25
22
7
44
1.79
55123256--55123340
42
2.0
42
100
0
170
42
22
11
23
1.86
55146347--55146377
12
2.6
12
94
0
53
70
0
6
22
1.09
55147693--55147947
44
5.6
44
71
14
151
34
18
18
28
1.94
55147677--55148023
142
2.5
139
86
7
489
33
20
19
26
1.96
55147820--55148023
44
4.7
43
74
11
184
31
20
20
27
1.98
55150038--55150088
27
1.9
26
84
11
68
23
7
11
56
1.61
55155596--55155668
8
9.2
8
75
14
71
35
0
2
61
1.10
55156842--55156887
24
2.0
24
95
4
85
13
21
0
65
1.26
55156976--55157009
17
2.1
17
94
5
61
52
32
0
14
1.42
55157067--55157113
23
2.0
24
87
4
69
57
4
2
36
1.30
55165378--55165413
18
2.0
18
89
10
56
27
13
13
44
1.82
55168269--55168293
7
3.6
7
100
0
50
32
16
16
36
1.90
55173938--55173962
10
2.5
10
100
0
50
52
8
0
40
1.31
55175650--55175760
44
2.5
46
77
12
131
27
22
20
28
1.99
55175643--55176410
87
8.8
87
89
2
1058
24
23
22
29
1.99
55175929--55176066
43
3.2
43
64
11
100
26
25
22
25
2.00
55176845--55177038
106
1.8
108
85
4
277
46
11
18
24
1.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55177372--55177416
13
3.5
12
84
6
54
0
20
2
77
0.87
55177373--55177431
20
3.0
20
76
14
59
0
16
3
79
0.86
55177374--55177430
19
3.2
17
79
18
55
0
15
3
80
0.84
55177372--55177429
26
2.2
26
81
6
73
0
17
3
79
0.87
55177866--55177934
8
8.4
8
82
16
63
2
1
10
85
0.76
55177878--55177933
26
2.2
26
93
3
96
1
0
12
85
0.67
55177873--55177935
6
10.8
6
74
19
53
3
0
12
84
0.75
55181437--55181463
12
2.2
12
100
0
54
51
7
0
40
1.30
55183040--55183067
6
4.7
6
100
0
56
0
14
0
85
0.59
55183032--55183066
11
3.1
11
88
8
52
0
20
0
80
0.72
55191664--55191741
35
2.3
32
84
6
93
34
26
11
26
1.91
55198615--55198639
12
2.1
12
100
0
50
24
0
44
32
1.54
55203403--55203465
24
2.6
24
95
5
110
34
23
25
15
1.95
55203744--55203856
55
2.1
55
96
0
208
30
21
27
21
1.98
55210341--55210374
2
16.5
2
93
6
59
50
2
0
47
1.16
55213357--55213483
40
3.2
40
74
7
125
32
22
17
28
1.96
55214353--55214439
17
4.8
18
70
23
58
1
17
6
74
1.09
55219525--55219551
12
2.2
12
100
0
54
48
37
0
14
1.45
55221808--55221885
40
2.0
40
84
5
104
33
23
2
41
1.68
55222710--55222764
19
3.0
19
81
5
51
45
3
0
50
1.19
55222830--55222870
15
2.8
15
85
3
57
39
0
0
60
0.96
55231383--55231432
22
2.3
22
85
0
73
26
10
24
40
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55231337--55231484
70
2.1
69
83
1
179
25
14
17
42
1.87
55231405--55231574
47
3.6
47
89
0
250
24
15
16
42
1.87
55231507--55231657
69
2.2
69
92
0
257
24
15
18
41
1.90
55231347--55231701
116
3.1
114
75
9
315
25
13
18
42
1.87
55234913--55234982
19
3.6
18
71
17
50
60
4
2
32
1.31
55238771--55238804
18
1.9
18
88
5
52
38
0
2
58
1.13
55239605--55239636
14
2.4
14
90
10
50
65
0
6
28
1.16
55247127--55247189
30
2.1
30
90
0
99
26
3
11
58
1.47
55247272--55247310
18
2.2
18
86
9
53
23
0
10
66
1.22
55247570--55247603
3
11.7
3
93
6
61
67
0
0
32
0.91
55248148--55248212
10
6.7
10
74
10
55
66
3
0
30
1.07
55250384--55250413
13
2.3
13
94
0
51
50
6
13
30
1.67
55254532--55254646
56
2.1
56
100
0
230
32
27
15
24
1.95
55256572--55256630
29
2.1
28
82
14
70
35
10
6
47
1.64
55258605--55258657
21
2.5
21
93
0
88
30
39
9
20
1.84
55259439--55259495
26
2.2
25
81
3
69
40
0
3
56
1.17
55259343--55259954
120
5.1
120
94
1
976
42
1
4
50
1.33
55259542--55259576
17
2.1
17
100
0
70
34
0
0
65
0.93
55259567--55259624
13
4.3
13
79
16
64
41
1
0
56
1.09
55259900--55259934
18
2.0
17
88
5
52
45
0
0
54
0.99
55260167--55260199
16
2.1
16
94
0
57
21
33
6
39
1.78
55260792--55260832
22
1.9
21
95
5
73
48
4
0
46
1.23
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55260782--55260899
29
4.1
28
73
11
80
55
5
1
36
1.34
55260804--55260904
9
10.9
9
72
12
62
60
4
1
32
1.29
55260855--55260900
19
2.4
19
81
0
56
60
4
4
30
1.35
55260966--55261057
47
2.0
47
93
4
159
40
11
7
40
1.71
55282514--55282701
44
4.3
45
66
11
113
26
23
19
31
1.98
55282812--55283178
132
2.8
132
96
0
653
26
24
20
27
1.99
55282855--55283178
44
7.4
44
64
10
142
26
24
20
27
1.99
55287423--55287800
27
14.0
27
84
3
440
18
19
18
43
1.88
55293282--55293427
62
2.4
62
79
4
154
32
15
14
37
1.88
55295551--55295793
92
2.6
91
84
1
297
42
12
13
31
1.81
55300579--55300611
3
11.0
3
100
0
66
33
0
0
66
0.92
55308853--55308926
34
2.2
34
87
0
103
37
25
5
31
1.79
55311050--55311199
76
2.0
76
87
0
219
29
19
12
38
1.89
55320253--55320298
20
2.3
20
84
0
65
36
8
0
54
1.32
55320236--55320400
52
3.2
52
75
13
194
35
9
3
52
1.51
55320192--55320404
104
2.1
104
96
1
394
35
8
3
52
1.51
55320354--55320400
20
2.3
20
85
0
67
34
10
0
55
1.35
55320685--55320709
13
1.9
13
100
0
50
16
0
16
68
1.22
55327825--55328815
44
22.5
44
85
4
1120
31
12
23
32
1.92
55334997--55335035
18
2.2
17
86
13
53
33
0
20
46
1.51
55335261--55335358
23
4.3
23
90
2
162
20
21
26
31
1.98
55335263--55335351
45
2.0
45
95
0
160
19
22
26
31
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55342361--55342399
18
2.2
17
86
13
53
33
0
20
46
1.51
55342625--55342722
23
4.3
23
90
2
162
20
21
26
31
1.98
55342627--55342715
45
2.0
45
95
0
160
19
22
26
31
1.97
55348166--55348320
41
3.8
41
87
3
195
18
20
30
30
1.96
55348763--55348800
13
2.9
13
81
14
51
15
0
47
36
1.46
55348855--55348886
7
4.6
7
92
0
55
12
0
53
34
1.39
55348846--55348885
21
1.9
21
89
0
62
12
0
52
35
1.39
55348855--55348894
21
1.9
21
84
0
53
17
0
50
32
1.47
55353696--55353790
43
2.2
43
88
0
136
34
11
8
45
1.71
55354064--55354312
43
5.8
43
81
4
281
24
15
32
28
1.95
55354066--55354312
85
2.9
84
83
4
298
24
15
32
27
1.96
55356494--55356518
6
4.2
6
100
0
50
68
0
0
32
0.90
55357138--55357193
22
2.5
22
94
2
94
30
30
0
39
1.57
55357165--55357280
51
2.3
51
93
0
196
29
25
0
44
1.60
55358305--55358329
7
3.6
7
100
0
50
28
0
12
60
1.32
55359536--55359588
19
2.7
19
83
11
63
60
11
7
20
1.55
55361078--55361185
44
2.4
46
82
11
136
25
24
16
33
1.96
55361080--55361226
44
3.3
45
80
6
131
27
23
16
32
1.96
55361247--55362636
132
10.5
132
89
2
1857
27
24
19
28
1.98
55361247--55362682
265
5.4
264
86
4
1858
27
24
19
28
1.98
55369091--55369143
19
2.7
19
83
11
63
60
11
7
20
1.55
55371288--55371374
44
2.0
45
88
6
133
36
0
13
49
1.43
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55371380--55372378
23
41.5
23
72
19
703
45
24
1
28
1.60
55371400--55371465
31
2.2
31
86
2
89
48
22
0
28
1.51
55371378--55372160
68
10.8
73
73
16
401
46
24
0
28
1.59
55371792--55371878
29
3.2
29
68
29
84
44
27
1
26
1.61
55371911--55372022
57
2.0
57
92
3
190
45
29
0
24
1.59
55371484--55372232
243
3.1
236
84
11
888
46
24
1
28
1.60
55372075--55372152
24
2.9
29
76
20
96
46
21
0
32
1.52
55371448--55372377
73
13.0
72
76
15
711
45
24
1
28
1.60
55372361--55372408
23
2.2
21
85
10
62
43
27
0
29
1.55
55372410--55372627
116
1.9
116
96
0
400
39
9
9
41
1.70

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216