Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: Gbar_D02 Parameters: 2 7 7 80 10 50 1000 Length: 67659327

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   

This is table  144  of  216  ( 25871 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45542340--45542379
20
2.0
20
85
0
53
42
20
7
30
1.79
45548993--45549020
13
2.2
13
100
0
56
32
17
0
50
1.47
45551061--45551097
18
2.1
18
100
0
74
62
16
5
16
1.51
45551518--45551892
184
2.0
185
92
1
617
37
8
16
37
1.80
45551735--45551769
18
1.9
18
88
0
52
42
14
20
22
1.88
45561878--45561925
9
5.3
9
74
0
51
25
29
0
45
1.53
45568637--45568665
13
2.2
13
100
0
58
68
10
6
13
1.37
45569135--45569169
15
2.4
15
90
4
54
48
0
8
42
1.33
45577132--45577186
27
2.1
26
86
3
74
30
3
5
60
1.37
45581701--45581771
28
2.5
28
97
0
133
71
7
12
8
1.29
45581719--45581804
34
2.4
36
78
7
104
72
5
13
8
1.27
45581775--45581823
6
7.7
6
93
4
53
81
0
14
4
0.83
45581787--45581823
7
5.4
7
93
6
67
86
0
13
0
0.57
45581781--45581823
13
3.2
13
90
6
68
83
0
13
2
0.74
45581661--45581811
80
1.9
80
81
6
182
73
7
11
6
1.24
45583440--45583771
87
3.8
87
89
3
490
29
22
23
24
1.99
45585894--45585948
27
2.1
26
86
3
74
30
3
5
60
1.37
45591681--45591736
25
2.2
25
80
0
67
19
25
26
28
1.99
45594495--45594551
23
2.5
24
82
8
82
22
19
12
45
1.83
45594596--45594652
28
2.0
28
86
6
78
61
14
5
19
1.51
45602588--45602676
18
4.9
18
88
0
133
32
15
23
28
1.95
45602588--45602676
36
2.5
36
94
0
151
32
15
23
28
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45613284--45613318
11
3.2
11
87
0
52
80
0
8
11
0.92
45617530--45617686
42
3.7
42
81
8
131
22
19
28
29
1.98
45621771--45621808
18
2.1
18
95
0
67
0
55
0
44
0.99
45621868--45621917
25
2.0
25
88
0
73
4
30
4
62
1.32
45625115--45625167
15
3.2
15
80
17
52
54
1
1
41
1.22
45625198--45625236
20
2.0
20
94
0
69
48
0
2
48
1.15
45625323--45625389
34
1.9
35
93
3
118
46
11
8
32
1.72
45633916--45633961
23
2.0
23
87
4
67
63
2
0
34
1.07
45633916--45633958
15
2.9
15
80
19
54
65
2
0
32
1.06
45637730--45637773
23
1.9
23
81
9
54
56
2
2
38
1.24
45644672--45644768
28
3.5
28
88
0
140
27
12
29
29
1.93
45644779--45644830
16
3.2
16
94
0
95
23
0
38
38
1.55
45645066--45645100
18
2.0
17
88
5
52
54
0
0
45
0.99
45644953--45645424
157
3.0
157
98
0
890
44
3
4
47
1.40
45645203--45645244
15
2.7
16
82
14
52
52
2
0
45
1.13
45645212--45645253
15
2.9
15
82
10
52
52
0
0
47
1.00
45645360--45645401
15
2.7
16
82
14
52
52
2
0
45
1.13
45645369--45645410
15
2.9
15
82
10
52
52
0
0
47
1.00
45650156--45650792
23
27.6
22
69
17
291
26
13
18
41
1.87
45650149--45650802
93
7.1
93
90
2
1050
26
12
18
42
1.86
45652418--45652460
20
2.2
20
100
0
86
27
25
16
30
1.97
45656062--45656210
53
2.8
52
81
1
163
34
11
24
30
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45658440--45658505
34
1.9
34
84
0
87
39
13
13
33
1.84
45659588--45659650
31
2.0
31
100
0
126
25
15
12
46
1.82
45660668--45660724
27
2.1
27
80
6
62
45
3
1
49
1.29
45661307--45661581
113
2.5
112
96
1
500
45
5
6
42
1.52
45661363--45661554
55
3.4
55
68
18
160
45
3
6
44
1.46
45661307--45661642
113
2.9
111
90
7
498
44
5
6
43
1.52
45662303--45662407
49
2.1
50
85
1
140
26
0
28
43
1.61
45662506--45663165
126
5.3
125
85
1
811
39
13
18
28
1.89
45668977--45669019
15
2.9
15
80
19
54
44
9
6
39
1.64
45676970--45677218
50
4.8
50
85
3
309
20
29
23
26
1.99
45676969--45677218
100
2.4
104
88
5
355
20
29
23
26
1.99
45677313--45677344
13
2.5
13
94
0
55
56
12
0
31
1.37
45687163--45687333
84
2.0
84
91
0
279
32
14
25
27
1.95
45692058--45692096
10
3.8
10
83
6
51
58
2
0
38
1.12
45692319--45692473
79
2.0
79
98
0
301
41
11
9
38
1.73
45692337--45692458
37
3.2
37
63
22
88
40
13
9
36
1.77
45710079--45710315
40
5.9
40
84
0
276
17
28
16
37
1.91
45710132--45710299
20
8.4
19
74
9
129
16
30
17
35
1.92
45712047--45712128
22
3.5
22
72
18
67
30
17
29
23
1.97
45724212--45724300
25
3.6
25
81
3
99
32
22
17
26
1.97
45729761--45729795
17
2.1
17
100
0
70
48
11
5
34
1.63
45730778--45730816
10
4.1
9
86
6
51
61
2
0
35
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45748449--45748481
13
2.6
13
95
4
59
39
48
0
12
1.40
45748488--45748571
39
2.4
33
83
15
98
53
26
2
17
1.56
45748467--45748582
38
3.0
38
93
2
205
51
26
2
18
1.59
45749022--45749187
38
4.5
38
81
8
128
35
16
24
24
1.95
45749058--45749558
35
13.9
35
79
6
385
38
15
20
25
1.92
45749058--45749512
72
6.3
73
79
6
435
38
16
20
25
1.92
45749051--45749532
145
3.3
143
79
7
483
38
16
19
25
1.92
45753610--45753720
19
5.8
19
91
0
186
38
10
15
35
1.82
45754479--45754528
25
2.0
26
88
4
75
32
8
4
56
1.47
45759869--45759912
8
5.9
8
79
15
58
88
11
0
0
0.51
45759868--45759913
9
4.9
9
84
10
65
89
10
0
0
0.50
45759867--45759913
21
2.4
19
89
10
76
89
10
0
0
0.49
45761166--45761551
132
2.9
132
95
0
682
29
21
25
24
1.99
45761278--45761462
44
4.2
44
67
13
137
28
22
24
24
1.99
45761625--45762142
44
11.9
43
72
12
323
28
19
23
28
1.98
45761542--45762147
217
2.8
216
93
1
1014
28
19
23
28
1.98
45761630--45761874
133
1.9
127
81
10
298
28
21
24
26
1.99
45761684--45761910
84
2.6
87
77
12
234
28
20
24
26
1.99
45761684--45761995
173
1.8
173
80
8
375
28
19
24
27
1.99
45762313--45762444
19
6.8
19
89
3
210
38
10
15
35
1.82
45762313--45762451
59
2.4
57
88
9
212
38
10
15
35
1.81
45763204--45763254
25
2.0
26
88
7
77
31
7
3
56
1.46
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45765327--45765383
17
3.2
17
77
18
53
78
1
5
14
0.99
45765338--45765383
20
2.3
20
92
7
76
78
0
4
17
0.91
45766533--45766775
105
2.3
105
87
0
351
29
19
17
33
1.95
45766837--45766947
44
2.6
43
88
4
154
29
25
19
25
1.99
45768173--45768219
21
2.2
21
88
0
67
29
23
17
29
1.97
45775394--45775429
18
1.9
19
88
5
56
38
0
27
33
1.57
45776892--45776927
18
1.9
19
88
5
56
38
0
27
33
1.57
45786647--45786920
122
2.3
119
92
4
451
28
25
21
24
1.99
45786647--45786918
40
6.8
40
91
3
438
28
25
21
25
1.99
45786635--45786957
162
2.0
162
90
2
506
29
25
21
24
1.99
45788423--45788447
9
2.8
9
100
0
50
8
0
0
92
0.40
45788853--45788881
2
14.5
2
100
0
58
48
0
0
51
1.00
45789309--45789516
107
1.9
107
91
0
335
31
15
17
35
1.92
45791793--45791835
22
1.9
22
90
4
68
53
6
2
37
1.41
45792686--45792725
18
2.2
18
90
0
62
42
5
0
52
1.23
45793172--45793226
26
2.1
27
83
10
69
25
0
14
60
1.35
45799169--45799378
105
2.0
105
100
0
420
36
21
8
33
1.84
45802259--45802424
78
2.1
78
95
0
296
36
14
21
27
1.92
45822687--45822712
8
3.2
8
100
0
52
34
23
11
30
1.90
45827056--45827133
35
2.1
36
81
11
88
34
20
16
28
1.94
45828678--45828714
19
1.9
19
100
0
74
32
24
21
21
1.98
45830036--45830173
68
2.0
71
85
5
192
51
5
3
39
1.43
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45844652--45844712
28
2.2
28
91
2
97
31
22
22
22
1.99
45845078--45845245
54
3.1
54
88
3
257
20
17
22
40
1.91
45845077--45845237
27
6.0
27
89
0
232
19
17
23
39
1.92
45848356--45848411
24
2.2
26
87
12
82
30
16
12
41
1.85
45861863--45861908
5
9.6
5
82
17
62
39
0
0
60
0.97
45862775--45862812
16
2.4
16
86
8
51
47
2
28
21
1.64
45863086--45863156
23
3.0
24
91
6
119
22
21
19
36
1.95
45863086--45863195
23
5.1
21
80
9
116
20
20
22
37
1.95
45865689--45865724
5
7.2
5
100
0
72
58
0
0
41
0.98
45871744--45871796
26
2.0
26
96
0
97
33
1
11
52
1.48

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216