Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_D02
Parameters: 2 7 7 80 10 50 1000
Length:  67659327

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   

This is table  87  of  216  ( 25871 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26811577--26811624
6
7.7
6
88
9
60
20
0
10
68
1.18
26811562--26811624
20
3.2
19
82
11
65
22
3
11
63
1.41
26813485--26813536
26
2.0
26
100
0
104
46
3
26
23
1.69
26814953--26815004
26
2.0
26
100
0
104
46
3
26
23
1.69
26816364--26816463
27
3.7
27
76
5
103
31
24
13
32
1.93
26821269--26821451
85
2.2
85
91
4
289
39
7
17
35
1.78
26823827--26824067
50
4.8
50
84
1
268
21
28
21
27
1.99
26837444--26837475
6
5.5
6
96
3
57
46
0
0
53
1.00
26837522--26837560
16
2.4
16
82
0
51
41
0
20
38
1.53
26837801--26837848
15
3.0
17
77
20
50
41
0
0
58
0.98
26837810--26837894
31
2.7
31
79
16
86
42
0
1
56
1.07
26837811--26837894
15
5.3
17
68
22
58
41
0
1
57
1.06
26838217--26838301
44
1.9
44
88
4
127
36
9
5
48
1.60
26845519--26845571
14
3.9
13
75
7
52
18
9
1
69
1.25
26852169--26852206
15
2.6
15
84
15
53
5
0
39
55
1.23
26860442--26860578
71
1.9
70
91
1
220
29
8
13
48
1.72
26865109--26865150
22
2.0
21
90
4
66
33
0
11
54
1.37
26876229--26876273
18
2.5
18
82
10
56
48
0
2
48
1.13
26881528--26881596
29
2.4
29
87
4
104
28
20
15
34
1.94
26889320--26889403
43
2.0
43
100
0
168
44
11
16
27
1.83
26889623--26889780
43
3.8
40
74
9
113
28
25
16
29
1.97
26889894--26890218
30
10.7
30
83
5
361
42
14
7
36
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26892108--26892147
21
2.0
20
85
5
53
50
25
2
22
1.62
26893861--26893986
33
3.8
33
77
4
130
19
19
15
46
1.84
26896628--26896735
55
2.0
55
92
0
180
29
12
25
32
1.92
26906955--26907007
25
2.2
24
86
10
72
39
24
20
15
1.91
26912955--26913002
19
2.4
21
76
16
57
22
31
8
37
1.84
26928163--26928198
3
12.0
3
100
0
72
66
0
0
33
0.92
26928531--26928597
16
4.4
16
75
21
54
67
2
7
22
1.30
26929081--26929115
6
5.8
6
100
0
70
0
14
0
85
0.59
26929752--26929808
3
18.7
3
81
3
51
54
1
7
36
1.38
26933797--26933856
21
2.9
21
79
0
57
16
28
28
26
1.97
26933820--26933861
21
2.0
21
95
0
75
14
16
35
33
1.89
26936620--26936656
2
18.5
2
100
0
74
51
48
0
0
1.00
26937018--26937053
18
2.0
18
88
0
54
11
2
8
77
1.08
26940753--26940789
6
6.2
6
100
0
74
67
0
0
32
0.91
26942773--26942804
15
2.1
15
100
0
64
56
6
6
31
1.49
26944817--26944844
13
2.2
13
100
0
56
64
0
14
21
1.29
26945846--26945897
26
2.0
26
88
7
79
19
23
19
38
1.93
26945938--26945991
24
2.2
24
83
6
65
14
27
25
31
1.95
26947825--26947854
16
1.9
15
93
6
51
40
33
0
26
1.57
26950523--26950592
27
2.6
27
95
2
113
31
28
12
27
1.93
26950523--26950620
28
3.5
28
90
2
135
31
28
13
26
1.94
26953395--26953442
19
2.5
20
86
3
62
43
22
25
8
1.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26954336--26954381
11
4.4
10
81
10
56
36
8
0
54
1.32
26958755--26958815
14
4.4
14
73
8
52
18
18
8
55
1.66
26958876--26958912
14
2.4
16
78
17
51
43
0
2
54
1.14
26958871--26959021
51
2.9
51
94
1
248
42
0
8
49
1.33
26972539--26972608
20
3.5
20
77
11
54
50
1
5
42
1.35
26972834--26972915
21
4.1
20
70
22
55
26
7
0
65
1.18
26972837--26972958
61
2.0
63
80
9
144
28
8
0
62
1.29
26972926--26972966
19
2.2
19
86
4
57
29
7
2
60
1.36
26972834--26973070
10
23.4
10
64
22
52
28
5
1
64
1.25
26972934--26973062
30
4.2
30
69
19
79
30
3
1
64
1.21
26972912--26973010
21
4.6
21
74
13
78
28
5
2
64
1.25
26972955--26973000
12
4.1
12
75
16
53
21
2
2
73
1.04
26972812--26972988
9
18.0
9
66
23
65
28
5
1
63
1.26
26973154--26973345
97
2.0
92
83
8
235
42
7
18
32
1.77
26973951--26974074
34
3.7
33
81
5
142
39
0
16
44
1.47
26973951--26974075
33
3.8
33
81
5
144
39
0
16
44
1.47
26974186--26974686
126
4.0
126
87
2
639
38
15
17
28
1.90
26979754--26979807
24
2.1
24
83
10
63
66
1
1
29
1.12
26982317--26982379
19
3.4
18
91
4
74
38
7
19
34
1.81
26982319--26982372
19
2.8
19
97
0
99
37
9
16
37
1.81
26982332--26982395
19
3.0
22
86
8
80
37
6
17
39
1.75
26982361--26982405
23
2.0
23
86
4
65
33
4
15
46
1.66
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26982566--26982604
19
2.0
21
85
10
55
15
10
5
69
1.34
26989772--26990092
44
7.3
44
63
10
129
27
29
23
19
1.98
26989377--26990204
88
9.4
88
88
0
1125
28
27
23
20
1.99
26990218--26990549
44
7.7
44
82
8
405
28
18
25
27
1.98
26990218--26990549
126
2.6
131
88
5
498
28
18
25
27
1.98
26991391--26991434
21
2.1
21
100
0
88
38
9
13
38
1.77
26991390--26991445
21
2.8
19
87
10
85
37
8
16
37
1.80
26991403--26991468
23
3.0
23
82
12
77
37
6
16
39
1.74
26991434--26991478
23
2.0
23
86
4
65
33
4
15
46
1.66
26991877--26991914
15
2.6
15
83
4
51
26
0
2
71
1.00
26991879--26991929
12
4.0
12
82
12
50
29
0
1
68
1.00
26991893--26991930
12
2.8
13
88
11
51
34
0
0
65
0.93
26996519--26996557
14
2.8
14
84
0
51
41
7
17
33
1.79
26997128--26997166
18
2.2
18
86
9
53
56
2
2
38
1.27
26997261--26997293
13
2.4
14
85
10
50
45
0
0
54
0.99
26999775--26999866
27
3.5
27
88
8
154
47
3
4
44
1.39
27000850--27000988
40
3.5
40
75
6
131
27
15
24
32
1.96
27003186--27003246
29
2.0
31
87
6
90
19
45
0
34
1.51
27011561--27011619
26
2.3
26
96
0
109
57
8
15
18
1.63
27011561--27011632
26
2.7
26
91
4
99
58
9
15
16
1.63
27026364--27026457
4
22.0
4
74
21
68
21
2
3
73
1.08
27026364--27026428
13
5.2
13
80
14
66
21
1
0
76
0.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27026392--27026424
5
7.0
5
86
13
52
18
0
0
81
0.68
27026379--27026424
18
2.6
18
89
3
67
19
2
0
78
0.86
27026371--27026455
31
2.8
30
78
18
86
20
2
3
74
1.08
27026368--27026456
13
6.8
13
72
20
60
20
2
3
74
1.07
27026568--27026592
8
3.1
8
100
0
50
24
0
0
76
0.80
27026681--27026765
36
2.4
36
89
0
134
24
10
9
55
1.63
27028360--27028440
25
3.1
25
75
18
76
14
1
7
76
1.06
27030865--27030972
36
3.0
36
89
2
182
30
12
13
42
1.82
27042075--27042269
23
8.5
23
73
7
119
32
3
23
41
1.71
27042199--27042288
23
4.0
23
71
11
78
28
3
24
43
1.70
27042778--27042873
45
2.3
43
82
10
110
39
22
4
33
1.74
27042852--27042891
16
2.5
16
91
0
62
30
25
7
37
1.83
27044934--27044993
18
3.1
19
71
15
59
38
3
0
58
1.15
27044936--27044995
20
3.0
20
69
16
61
36
3
0
60
1.14
27045927--27045965
20
2.0
20
94
0
69
43
15
12
28
1.83
27047415--27047462
18
2.7
18
80
0
51
29
10
12
47
1.74
27047687--27047717
14
2.2
14
94
0
53
35
6
16
41
1.74
27047709--27047746
19
2.0
19
100
0
76
26
10
15
47
1.78
27049255--27049476
43
5.2
43
87
1
311
23
27
18
30
1.98
27049825--27050001
87
2.0
87
86
0
246
14
30
15
39
1.87
27055486--27055887
9
47.4
9
69
18
211
30
1
17
50
1.56
27055486--27055822
25
13.4
25
76
12
300
31
1
18
48
1.57
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27055486--27055722
16
15.0
16
75
17
153
33
1
18
46
1.59
27055776--27055916
12
11.8
12
68
15
78
27
1
17
53
1.53
27055705--27055908
96
2.1
96
99
0
399
26
0
17
54
1.49
27055865--27055923
24
2.5
24
89
5
86
27
1
18
52
1.55
27055875--27055929
24
2.5
22
85
8
67
27
1
21
49
1.60
27055705--27055964
96
2.7
95
88
5
294
27
1
18
52
1.54
27056049--27056087
19
2.0
20
95
5
62
56
0
0
43
0.99
27056111--27056191
9
9.0
9
70
15
60
39
1
14
44
1.54
27056115--27056193
29
2.5
33
86
10
103
40
1
13
44
1.52
27056141--27056196
16
3.3
17
82
9
78
42
1
14
41
1.56

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216