Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: Gbar_D02 Parameters: 2 7 7 80 10 50 1000 Length: 67659327

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   

This is table  174  of  216  ( 25871 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54413639--54413689
22
2.4
22
86
3
68
64
3
0
31
1.11
54413964--54414104
70
2.0
70
98
0
273
46
5
26
21
1.74
54415705--54415739
10
3.4
10
92
4
52
57
0
5
37
1.23
54417717--54417768
21
2.5
21
87
0
68
40
11
30
17
1.85
54422468--54422575
53
2.0
53
98
0
207
31
12
5
50
1.62
54424390--54424486
49
2.0
49
85
0
131
22
16
29
30
1.96
54426125--54426179
19
2.9
18
75
17
58
72
10
3
12
1.24
54426125--54426179
20
2.8
19
76
15
60
72
10
3
12
1.24
54431608--54431726
60
2.0
60
100
0
238
34
20
13
31
1.91
54448311--54448371
28
2.1
29
85
11
81
57
16
11
14
1.65
54449385--54449589
39
5.3
39
86
0
259
26
13
25
34
1.93
54457756--54458124
184
2.0
184
89
1
569
31
13
16
38
1.87
54459019--54459067
23
2.1
25
85
11
68
30
2
20
46
1.62
54471383--54471423
20
2.0
20
100
0
82
31
19
4
43
1.72
54471385--54471429
20
2.5
17
86
13
56
26
20
4
48
1.68
54478643--54478738
40
2.4
41
77
11
101
14
31
19
34
1.92
54478674--54478732
19
3.1
19
70
18
50
11
35
22
30
1.90
54478981--54479084
52
2.0
52
100
0
208
40
11
17
30
1.85
54480155--54480209
25
2.2
25
96
0
101
23
29
27
20
1.99
54482150--54482206
30
1.9
30
92
0
96
21
40
0
38
1.53
54482315--54482374
30
2.0
31
83
3
77
20
38
0
41
1.52
54485540--54485677
41
3.4
41
84
10
183
20
21
25
33
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54486110--54486251
75
1.9
75
85
7
200
28
0
26
43
1.60
54486241--54486293
7
7.6
7
78
0
52
15
0
47
37
1.45
54486241--54486299
21
2.8
21
71
0
55
18
0
44
37
1.50
54488286--54488460
30
5.8
30
93
0
296
25
49
3
22
1.65
54488286--54488460
60
2.9
60
98
0
332
25
49
3
22
1.65
54488546--54488619
26
2.8
26
89
2
112
18
1
35
44
1.59
54488548--54488628
26
3.1
26
83
3
108
20
1
35
41
1.61
54489127--54489209
30
2.7
30
83
7
87
33
4
3
57
1.37
54489198--54489260
23
2.7
23
85
11
76
34
7
4
52
1.52
54489417--54489464
16
3.1
15
87
6
60
29
2
4
64
1.23
54489417--54489468
8
6.5
8
78
8
52
28
1
3
65
1.21
54497774--54497948
71
2.5
70
85
2
219
28
14
22
34
1.94
54497952--54498296
147
2.3
146
86
5
478
31
15
20
33
1.93
54497966--54498301
75
4.5
74
88
4
464
31
15
20
32
1.94
54498456--54498596
72
2.0
72
92
0
237
21
15
24
38
1.92
54498448--54499381
160
5.9
157
78
14
844
27
16
20
34
1.94
54498524--54499375
88
10.7
84
75
17
527
28
16
20
34
1.95
54498684--54499050
72
5.1
72
85
6
467
28
16
20
34
1.95
54499035--54499064
13
2.3
13
94
0
51
10
13
6
70
1.34
54499049--54499210
73
2.2
74
89
2
245
23
18
22
35
1.95
54498905--54499380
161
2.9
163
86
5
615
28
17
20
34
1.95
54499212--54499419
77
2.7
76
86
5
278
33
14
18
33
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54500131--54500305
30
5.8
30
93
0
296
25
49
3
22
1.65
54500131--54500305
60
2.9
60
98
0
332
25
49
3
22
1.65
54500387--54500464
26
3.0
26
96
1
138
15
2
39
42
1.61
54500393--54500473
26
3.1
25
86
10
108
18
1
38
41
1.58
54500858--54501057
23
8.2
25
69
16
82
34
6
5
55
1.46
54501208--54501255
16
3.1
15
87
6
60
29
2
4
64
1.23
54501208--54501259
8
6.5
8
78
8
52
28
1
3
65
1.21
54503892--54503982
43
2.1
43
86
6
123
34
12
8
45
1.72
54504250--54504562
43
7.3
43
82
3
380
23
17
30
28
1.97
54504250--54504564
86
3.7
86
87
2
420
23
17
30
28
1.97
54504648--54504694
13
4.0
13
71
25
50
40
27
23
8
1.83
54504655--54504698
21
2.1
21
95
0
79
38
29
20
11
1.87
54517863--54517887
13
1.9
13
100
0
50
40
16
0
44
1.47
54519733--54519758
13
2.0
13
100
0
52
38
0
7
53
1.30
54521563--54521714
23
6.6
23
75
0
133
43
20
20
15
1.88
54521555--54521713
46
3.5
46
90
0
255
44
19
20
16
1.87
54523233--54523523
50
5.8
50
87
0
359
21
29
22
26
1.99
54530186--54530604
50
8.6
50
81
7
493
21
30
22
26
1.99
54534013--54534086
37
2.0
37
100
0
148
35
27
5
32
1.79
54534449--54534498
26
2.0
26
84
4
66
50
14
8
28
1.70
54542035--54542142
41
2.6
41
89
0
153
19
28
16
35
1.94
54543642--54543680
13
2.9
13
82
17
53
76
0
12
10
1.01
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54552211--54552237
3
9.0
3
100
0
54
66
0
0
33
0.92
54555352--54555419
30
2.3
30
85
12
95
41
19
22
17
1.91
54566304--54566706
202
2.0
201
97
0
761
38
13
6
40
1.72
54569646--54570494
426
2.0
426
96
0
1565
36
14
12
36
1.84
54579268--54579329
22
2.8
22
87
7
81
30
1
6
61
1.31
54582522--54582660
41
3.4
41
83
4
163
18
22
30
28
1.97
54596380--54596479
41
2.5
41
88
1
139
38
13
25
24
1.91
54604245--54604344
41
2.5
41
88
1
139
38
13
25
24
1.91
54614438--54614507
34
1.9
38
86
11
103
7
17
2
72
1.19
54619341--54619386
18
2.5
19
82
10
60
67
8
0
23
1.18
54619461--54619553
30
3.1
30
96
0
168
56
12
3
26
1.51
54620097--54620131
18
1.9
18
88
0
52
60
0
11
28
1.32
54626282--54626362
28
2.9
28
83
0
99
44
13
22
19
1.86
54630741--54630784
23
1.9
23
85
0
61
43
4
13
38
1.65
54642605--54642647
15
2.9
14
86
6
50
13
13
0
72
1.13
54642589--54642648
19
3.1
19
75
15
52
15
11
1
71
1.22
54656705--54656774
36
2.1
35
86
10
101
41
0
1
57
1.08
54659221--54659281
30
2.1
29
84
3
77
32
11
18
37
1.86
54665862--54665903
23
1.9
22
85
9
59
64
7
7
21
1.43
54665904--54665935
17
1.9
16
93
6
55
56
6
3
34
1.40
54667226--54667260
3
11.7
3
100
0
70
31
0
0
68
0.90
54667654--54667942
45
6.6
45
78
10
208
25
21
21
30
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54667739--54667943
44
4.8
42
80
8
189
25
22
22
29
1.99
54668361--54668498
45
3.1
45
73
4
145
26
28
19
24
1.99
54668386--54668519
43
3.1
43
72
4
133
25
26
20
27
1.99
54668358--54668519
88
1.8
88
89
0
252
25
27
21
25
1.99
54680606--54680654
23
2.1
23
88
0
71
69
4
4
22
1.23
54680646--54680677
17
1.9
16
93
6
55
56
6
3
34
1.40
54682013--54682044
9
3.4
10
87
12
50
68
12
0
18
1.20
54682072--54682157
28
3.1
26
75
14
73
58
4
3
33
1.36
54684127--54684167
20
2.0
20
85
0
55
31
0
21
46
1.52
54693346--54693402
21
2.7
22
86
8
82
28
5
35
31
1.79
54699963--54699987
2
12.5
2
100
0
50
0
0
48
52
1.00
54702123--54702159
17
2.1
18
90
5
58
10
5
8
75
1.17
54702555--54702590
19
1.9
18
94
5
63
19
2
0
77
0.88
54705246--54705300
28
2.0
28
85
7
76
29
5
23
41
1.76
54708534--54708568
13
2.6
13
90
4
52
31
0
0
68
0.90
54708820--54708965
50
2.9
51
71
7
136
23
17
23
35
1.95
54709008--54709429
87
4.9
87
71
9
308
29
20
18
32
1.96
54708982--54709437
175
2.6
175
90
0
700
28
19
18
32
1.96
54709144--54709386
46
5.5
45
70
11
171
29
18
19
32
1.96
54729867--54729910
22
2.2
19
84
12
52
59
6
0
34
1.24
54735073--54735106
16
2.1
16
88
0
50
35
20
2
41
1.68
54735153--54735193
20
2.1
19
86
13
57
36
21
0
41
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54740199--54740228
15
2.0
15
93
0
51
16
0
6
76
0.99
54747016--54747078
30
2.1
30
93
0
108
47
6
22
23
1.74
54751219--54751296
39
2.0
39
97
0
147
34
25
8
30
1.87
54753144--54753295
35
4.3
35
82
0
160
39
29
12
18
1.87
54753134--54753295
70
2.3
70
80
1
180
40
29
11
18
1.86
54758530--54758578
19
2.4
20
75
25
57
67
0
2
30
1.02
54758511--54758577
18
3.6
18
75
13
64
71
0
2
25
1.00
54761148--54761208
29
2.1
29
81
0
68
29
3
3
63
1.26
54764274--54764306
15
2.1
16
88
5
50
51
3
0
45
1.16
54769175--54769269
42
2.3
42
88
0
145
25
27
17
29
1.98

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216