Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: Gbar_D02 Parameters: 2 7 7 80 10 50 1000 Length: 67659327

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   

This is table  130  of  216  ( 25871 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41406332--41406527
51
3.9
50
82
4
241
31
27
17
23
1.97
41406338--41406523
101
1.8
99
88
5
275
32
26
17
23
1.97
41420260--41420335
20
3.8
20
87
6
118
48
0
28
22
1.51
41431571--41431613
22
2.0
21
86
13
61
41
18
0
39
1.51
41439081--41439108
6
4.7
6
100
0
56
50
32
0
17
1.47
41442467--41443487
4
255.8
4
88
0
1281
24
4
25
45
1.73
41455416--41455462
20
2.3
20
81
0
58
40
6
14
38
1.72
41460802--41460836
16
2.2
16
89
0
52
20
14
20
45
1.85
41464984--41465033
26
1.9
26
87
0
73
16
12
12
60
1.60
41465930--41466094
88
1.9
88
90
0
267
28
20
23
27
1.99
41466150--41466733
45
13.1
45
85
4
761
30
17
22
29
1.97
41466065--41466733
90
7.5
90
83
4
779
30
17
22
28
1.97
41466181--41466733
223
2.5
222
84
3
729
30
17
22
28
1.97
41466148--41466642
268
1.9
265
90
1
783
29
17
23
29
1.97
41466421--41466733
132
2.3
133
86
3
466
30
17
21
30
1.96
41467371--41467406
16
2.3
16
95
4
65
19
5
0
75
1.00
41468150--41468190
3
13.7
3
86
0
55
36
2
0
60
1.10
41468544--41468592
21
2.2
21
82
7
62
40
10
4
44
1.57
41470822--41470852
15
2.1
15
93
0
53
25
3
19
51
1.62
41471396--41471523
23
5.6
22
75
11
80
31
2
26
39
1.69
41471578--41471680
23
4.5
22
75
16
84
28
0
27
43
1.61
41471361--41471711
182
1.9
182
92
2
598
29
3
25
41
1.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41471397--41471708
46
6.8
46
73
7
226
30
3
25
40
1.73
41475174--41475321
55
2.6
54
84
7
163
41
0
2
54
1.19
41476485--41476532
22
2.2
22
85
7
62
29
4
10
56
1.52
41478158--41478184
5
5.4
5
100
0
54
62
0
0
37
0.95
41479131--41479192
21
3.0
21
92
0
106
12
20
19
46
1.83
41479684--41479846
79
2.1
79
98
0
317
36
6
20
36
1.78
41485572--41485622
18
2.8
18
80
11
50
25
5
3
64
1.33
41485875--41485940
29
2.3
29
82
12
75
21
16
18
43
1.87
41497181--41497225
21
2.1
21
83
0
54
53
6
2
37
1.40
41500216--41500276
30
2.0
31
87
9
90
50
0
0
49
1.00
41505118--41505176
27
2.2
27
93
0
100
28
16
6
47
1.72
41505799--41505863
25
2.6
25
69
13
62
35
23
13
27
1.93
41506097--41506164
24
2.8
24
76
8
68
25
25
17
32
1.97
41519915--41519978
25
2.6
25
82
5
76
35
12
17
34
1.87
41525451--41526852
469
3.0
467
92
1
2290
23
11
26
37
1.90
41528006--41528058
28
1.9
27
88
3
79
33
9
15
41
1.79
41530674--41530702
12
2.4
12
100
0
58
72
20
6
0
1.07
41536846--41536888
19
2.2
20
84
12
54
39
4
30
25
1.76
41537274--41537298
10
2.5
10
100
0
50
36
0
12
52
1.39
41545948--41546186
50
4.7
50
81
4
221
23
28
20
27
1.99
41556954--41557151
50
3.8
50
83
4
225
22
29
21
26
1.99
41558427--41558468
12
3.5
12
75
12
50
23
42
0
33
1.55
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41569138--41569322
101
1.8
102
91
3
311
24
17
27
30
1.97
41569135--41569320
51
3.7
49
82
5
212
24
17
27
30
1.97
41571546--41571653
44
2.5
44
89
3
146
45
10
25
18
1.81
41571671--41571776
33
3.2
34
84
5
103
42
16
23
17
1.88
41576988--41577180
51
3.8
49
81
3
206
31
25
15
26
1.96
41593856--41593994
42
3.3
42
82
4
172
15
18
19
46
1.85
41593856--41593994
21
6.6
21
72
6
84
15
18
19
46
1.85
41596160--41596402
50
4.7
50
81
7
247
27
19
28
24
1.98
41599441--41599503
19
3.5
20
66
29
61
26
19
12
41
1.87
41599430--41599506
33
2.3
33
95
0
145
28
18
11
41
1.85
41599430--41599516
33
2.6
32
87
7
129
27
17
13
41
1.87
41599568--41599602
18
2.1
18
89
10
56
31
5
20
42
1.75
41613022--41613056
5
7.0
5
93
0
61
17
20
2
60
1.49
41615268--41615333
25
2.6
25
77
18
73
56
6
6
31
1.48
41615438--41615474
15
2.3
17
86
9
51
72
0
2
24
0.97
41617189--41617682
44
11.0
44
73
9
307
30
20
17
32
1.95
41617234--41617405
91
1.9
89
84
7
229
31
21
18
28
1.96
41624262--41624301
6
6.7
6
86
8
55
65
2
0
32
1.06
41624254--41624300
25
2.0
23
87
8
67
63
4
0
31
1.13
41628149--41628212
27
2.4
28
76
10
71
20
6
3
70
1.23
41633738--41633909
83
2.1
83
96
1
317
40
14
10
34
1.80
41637646--41638096
114
4.0
114
89
0
679
23
22
26
27
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41638706--41638748
14
3.2
14
83
9
54
20
0
41
37
1.53
41638725--41638749
12
2.1
12
100
0
50
16
0
52
32
1.44
41638718--41638765
19
2.4
20
82
6
53
22
0
45
31
1.53
41638768--41639113
83
3.9
89
79
10
361
28
2
26
43
1.66
41638938--41639113
96
1.9
91
86
9
248
26
2
28
42
1.68
41639162--41639215
21
2.6
21
72
21
51
50
1
5
42
1.36
41639205--41639248
8
5.2
8
82
17
54
56
0
9
34
1.31
41639210--41639258
9
5.4
9
88
9
73
61
0
8
30
1.25
41639210--41639266
27
2.1
27
86
0
78
64
0
7
28
1.19
41639252--41639296
20
2.4
19
82
10
56
80
0
2
17
0.82
41639443--41640189
199
3.8
199
93
0
1298
31
17
24
26
1.97
41642410--41642456
21
2.2
21
84
0
58
40
12
0
46
1.42
41642717--41642771
28
2.0
28
85
0
74
27
21
10
40
1.87
41643071--41643228
46
3.3
46
70
17
149
46
18
0
34
1.54
41643169--41643252
8
10.5
8
71
16
59
47
16
0
35
1.47
41643169--41643410
17
13.6
17
66
24
65
46
16
0
36
1.53
41643196--41643252
8
6.8
8
76
11
60
47
17
0
35
1.48
41643169--41643252
34
2.3
36
86
8
109
47
16
0
35
1.47
41643347--41643410
25
2.5
26
87
2
94
43
14
1
40
1.54
41643916--41644141
43
5.3
43
90
2
330
26
20
30
22
1.98
41647359--41647407
16
3.1
16
84
0
71
36
4
34
24
1.75
41647387--41647476
45
2.0
44
89
6
137
32
3
28
35
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41647387--41647493
45
2.5
43
84
11
134
33
2
29
33
1.72
41647621--41647662
15
2.7
16
82
14
52
52
2
0
45
1.13
41647630--41647671
15
2.9
15
82
10
52
52
0
0
47
1.00
41647761--41647795
18
2.0
17
88
5
52
54
0
0
45
0.99
41647669--41647855
60
3.1
60
67
13
159
48
7
3
40
1.49
41647619--41647915
119
2.5
121
93
2
501
49
5
3
42
1.40
41647717--41647904
59
3.2
58
69
10
173
50
4
3
42
1.38
41656895--41656923
12
2.3
13
94
5
51
75
0
0
24
0.80
41669629--41669683
26
2.1
27
82
3
67
52
7
3
36
1.47
41669683--41669721
14
2.6
15
88
8
53
76
2
12
7
1.09
41670241--41670456
96
2.2
96
86
5
294
40
4
17
37
1.69
41670495--41670911
126
3.3
126
91
2
658
33
17
21
27
1.96
41675002--41675094
11
8.5
11
86
3
107
44
0
32
23
1.54
41675520--41675557
6
6.3
6
88
11
60
0
18
0
81
0.69
41675520--41675569
14
3.7
14
84
12
61
0
22
0
78
0.76
41675522--41675565
12
3.5
13
87
9
65
0
20
0
79
0.73
41680421--41680481
29
2.1
29
81
6
70
40
6
0
52
1.27
41681303--41681338
14
2.6
14
86
0
54
33
19
2
44
1.65
41689730--41689786
29
2.0
29
82
6
71
47
8
5
38
1.57
41694846--41695030
101
1.8
102
83
3
248
24
17
27
30
1.97
41694899--41695030
51
2.6
51
85
2
167
23
18
27
31
1.97
41694952--41695032
26
3.2
26
64
22
71
23
14
28
33
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41695039--41695127
45
2.0
45
93
0
151
25
17
23
32
1.97
41700684--41700815
51
2.6
51
80
7
151
24
18
27
30
1.98
41700737--41700817
26
3.2
26
64
22
71
23
16
28
32
1.96
41700824--41700913
45
2.0
46
88
2
137
24
17
25
32
1.97
41703036--41703083
13
3.5
13
75
13
51
70
8
0
20
1.12
41703036--41703084
14
3.4
14
73
15
55
71
8
0
20
1.11
41704682--41704788
36
3.0
36
80
5
128
28
20
20
29
1.98
41704845--41704888
21
2.1
21
91
0
70
40
6
31
20
1.79
41704754--41704979
123
1.8
123
88
3
348
28
16
26
27
1.97
41704794--41704935
72
2.0
72
84
2
187
31
14
27
26
1.95

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216