Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_D08
Parameters: 2 7 7 80 10 50 1000
Length:  65987480

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   

This is table  202  of  211  ( 25274 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62474745--62474776
13
2.5
13
94
0
55
31
0
12
56
1.37
62474871--62475111
50
4.7
50
86
5
297
26
24
29
19
1.99
62474871--62475119
100
2.4
103
87
7
355
26
23
29
20
1.99
62476562--62476636
29
2.5
30
82
2
89
49
5
17
28
1.68
62484632--62484667
18
2.1
17
89
5
54
5
52
41
0
1.24
62484774--62484838
28
2.2
29
81
5
69
32
1
0
66
1.01
62489063--62489087
5
5.0
5
100
0
50
60
0
0
40
0.97
62490428--62490524
41
2.5
40
81
6
119
30
25
19
23
1.98
62490389--62490524
40
3.4
41
76
9
129
31
24
18
25
1.97
62496701--62496725
11
2.3
11
100
0
50
56
8
0
36
1.29
62496703--62496752
15
3.2
16
76
20
52
52
14
0
34
1.42
62497681--62497733
25
2.0
27
82
13
67
45
3
3
47
1.39
62505077--62505305
85
2.7
81
80
8
244
29
16
14
38
1.89
62506236--62506297
29
2.2
29
85
8
83
30
1
1
66
1.11
62513891--62513930
14
3.0
13
82
17
55
60
0
2
37
1.11
62522789--62522836
26
1.9
25
84
16
64
45
0
2
52
1.12
62522670--62522861
92
2.1
92
86
4
264
45
3
3
47
1.36
62522864--62522936
28
2.7
27
67
21
62
43
1
0
54
1.08
62522866--62523059
54
3.4
54
71
19
158
42
2
3
51
1.31
62522950--62523134
38
4.8
38
64
17
94
43
2
6
47
1.41
62523002--62523053
15
3.6
15
80
12
56
44
0
1
53
1.11
62522877--62523144
119
2.2
119
93
3
450
42
2
4
49
1.37
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62523212--62523246
18
2.0
17
88
5
52
45
0
0
54
0.99
62523392--62523501
45
2.6
43
80
11
120
34
29
4
31
1.78
62523482--62523517
16
2.2
16
95
0
63
38
33
0
27
1.57
62523857--62523905
25
1.9
25
87
4
71
44
8
4
42
1.53
62524610--62524767
46
3.5
46
75
13
182
44
4
4
46
1.43
62524584--62524770
91
2.0
92
96
1
349
45
4
4
45
1.42
62528913--62528944
6
5.2
6
96
3
55
34
0
0
65
0.93
62539409--62539442
14
2.5
14
95
4
61
20
5
8
64
1.43
62541521--62541628
15
7.2
15
67
12
78
44
7
22
25
1.79
62541514--62541628
30
3.8
30
96
0
194
45
6
22
25
1.77
62546203--62546310
15
7.2
15
69
12
87
43
7
23
25
1.79
62546196--62546310
30
3.8
30
97
0
203
44
6
23
25
1.78
62553047--62553085
15
2.5
16
84
16
55
38
2
0
58
1.12
62554940--62555008
15
4.5
15
68
20
52
49
1
2
46
1.25
62555957--62556070
37
2.9
41
73
11
121
24
14
24
35
1.94
62558088--62558145
26
2.2
26
87
0
80
39
15
17
27
1.90
62560681--62560725
22
2.0
22
82
4
54
15
4
17
62
1.49
62563117--62563141
6
4.2
6
100
0
50
32
36
0
32
1.58
62563602--62563630
2
15.0
2
92
7
51
0
51
0
48
1.00
62568046--62568078
6
5.5
6
100
0
66
48
51
0
0
1.00
62570011--62570039
6
5.0
6
95
4
51
48
0
0
51
1.00
62571524--62571582
27
2.1
28
84
9
77
61
5
3
30
1.34
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62571697--62571776
38
2.1
38
90
6
126
61
7
0
31
1.24
62572580--62572630
5
9.8
5
85
6
66
43
0
1
54
1.11
62573950--62573988
18
2.1
19
90
4
62
41
0
10
48
1.37
62574228--62574362
39
3.4
39
74
6
112
23
20
28
28
1.99
62574485--62574525
19
2.2
19
87
12
59
46
0
24
29
1.53
62579021--62579077
5
10.8
5
83
9
69
43
0
1
54
1.10
62579022--62579078
26
2.2
25
85
11
80
43
0
1
54
1.10
62580393--62580431
18
2.1
19
90
4
62
41
0
10
48
1.37
62580671--62580805
39
3.4
39
74
6
112
23
20
28
28
1.99
62580928--62580968
19
2.2
19
87
12
59
46
0
24
29
1.53
62582554--62582585
15
2.1
15
94
0
55
21
9
31
37
1.85
62582561--62582594
15
2.3
15
89
0
50
26
5
29
38
1.80
62583266--62583356
44
2.1
44
87
4
130
46
6
10
36
1.65
62590473--62590514
20
2.1
21
86
8
61
52
2
0
45
1.13
62593406--62593475
27
2.4
27
86
9
86
20
8
14
57
1.63
62593433--62593494
31
2.0
32
84
9
83
19
12
14
53
1.73
62594954--62594983
2
15.0
2
100
0
60
0
50
0
50
1.00
62609875--62609900
6
4.3
6
100
0
52
15
0
53
30
1.42
62610124--62610157
3
11.3
3
87
0
50
38
0
61
0
0.96
62610567--62610596
3
9.7
3
92
7
51
33
0
0
66
0.92
62610773--62610805
17
1.9
17
93
0
57
27
0
0
72
0.85
62611165--62611219
21
2.8
21
81
10
62
54
0
1
43
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62611165--62611222
20
3.1
18
80
11
62
56
0
1
41
1.09
62611190--62611234
10
4.5
11
83
13
53
66
0
0
33
0.92
62611182--62611234
21
2.7
21
82
8
58
62
0
1
35
1.06
62611421--62611486
10
6.6
10
72
11
55
36
0
4
59
1.18
62611449--62611486
11
3.5
11
89
10
60
42
0
2
55
1.14
62611486--62611528
22
2.0
21
86
8
61
51
4
0
44
1.22
62613031--62613073
18
2.4
18
88
3
61
30
6
0
62
1.21
62613395--62613445
21
2.3
22
77
16
61
60
15
3
19
1.50
62613495--62613543
23
2.2
21
85
7
62
63
0
8
28
1.23
62613538--62613596
25
2.4
25
85
2
84
64
6
10
18
1.46
62616255--62616317
12
5.0
12
83
11
72
49
9
12
28
1.72
62616266--62616317
27
2.0
26
88
3
77
51
9
11
26
1.68
62621774--62621845
31
2.4
31
86
6
94
36
9
13
40
1.78
62622439--62622497
16
3.8
16
70
17
52
66
1
0
32
1.02
62632659--62632825
83
2.0
83
90
0
262
23
11
17
47
1.81
62633070--62633100
7
4.6
7
92
8
55
83
0
0
16
0.64
62633070--62633097
13
2.2
13
100
0
56
85
0
0
14
0.59
62633070--62633108
20
2.0
20
94
0
69
82
0
0
17
0.68
62633507--62633547
15
2.7
16
77
11
50
48
2
0
48
1.14
62639963--62640003
21
2.0
21
90
0
64
29
21
29
19
1.98
62644647--62644719
21
3.5
20
77
18
69
61
1
6
30
1.30
62644662--62644704
15
2.9
15
78
21
54
65
0
4
30
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62645173--62645218
20
2.3
20
82
10
51
52
2
45
0
1.13
62645174--62645223
18
3.0
17
73
21
52
48
2
50
0
1.12
62645317--62645364
22
2.1
23
84
3
62
20
4
2
72
1.11
62645883--62645914
16
2.0
16
93
0
55
12
6
40
40
1.68
62651881--62651918
21
1.9
21
89
10
62
50
0
0
50
1.00
62652240--62652277
20
2.0
20
89
5
60
34
0
2
63
1.09
62653784--62653826
16
2.7
17
82
13
56
51
0
0
48
1.00
62653786--62653828
14
2.8
15
80
13
52
48
0
0
51
1.00
62656757--62656803
24
2.0
24
86
0
67
29
25
25
19
1.98
62660273--62660338
22
3.1
21
76
12
64
39
0
3
57
1.14
62662209--62662329
11
11.9
11
70
22
70
61
0
3
35
1.13
62662213--62662340
39
3.3
38
87
6
202
62
0
3
34
1.11
62662213--62662347
40
3.4
39
85
4
200
62
0
2
34
1.10
62662314--62662358
17
2.6
17
85
0
63
60
0
0
40
0.97
62666479--62666531
26
2.0
26
92
0
88
30
13
11
45
1.78
62674957--62675008
12
4.1
12
77
18
52
67
1
3
26
1.18
62675158--62675207
3
16.7
3
80
15
59
64
0
6
30
1.18
62675160--62675204
15
2.9
15
87
12
65
64
0
6
28
1.19
62675158--62675207
21
2.4
22
90
6
77
64
0
6
30
1.18
62689623--62689736
44
2.6
43
93
6
192
44
30
3
21
1.69
62689722--62689751
13
2.3
13
94
0
51
60
13
6
20
1.55
62690369--62690408
21
1.9
21
94
0
71
55
10
5
30
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62690407--62690461
9
6.2
9
76
4
58
41
9
14
34
1.77
62690407--62690452
17
2.6
17
89
3
65
43
8
13
34
1.74
62690407--62690461
18
3.1
18
86
5
76
41
9
14
34
1.77
62691827--62691865
10
3.8
10
80
6
51
0
25
0
74
0.82
62691955--62692043
27
3.3
26
77
12
99
22
34
21
21
1.97
62768749--62768793
12
4.2
11
78
21
51
44
0
0
55
0.99
62774741--62774774
17
1.9
18
94
5
61
35
5
0
58
1.22
62775149--62775197
21
2.3
22
82
13
66
46
0
0
53
1.00
62777212--62777247
16
2.2
16
100
0
72
25
0
36
38
1.56
62777484--62777518
18
2.0
17
88
5
52
54
0
0
45
0.99

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211