Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_D08
Parameters: 2 7 7 80 10 50 1000
Length:  65987480

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   

This is table  85  of  211  ( 25274 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26394010--26394110
51
2.0
50
84
5
132
63
2
25
7
1.36
26394100--26394212
54
2.1
54
85
3
147
58
2
24
14
1.49
26397169--26397226
10
6.0
10
82
8
75
41
10
15
32
1.81
26397176--26397226
18
2.7
20
90
6
79
43
11
13
31
1.80
26398464--26398497
14
2.4
14
80
0
50
11
5
0
82
0.83
26398461--26398516
23
2.4
23
74
8
60
10
14
1
73
1.18
26399950--26399987
19
2.0
20
94
5
69
36
10
34
18
1.85
26400936--26400973
20
1.9
19
89
5
58
23
26
15
34
1.95
26404366--26404409
10
4.3
10
85
5
61
65
2
9
22
1.32
26404371--26404407
11
3.5
11
92
3
58
75
2
8
13
1.13
26405298--26405363
20
3.2
20
79
12
71
66
0
25
7
1.18
26405307--26405366
26
2.3
25
81
13
68
71
0
23
5
1.05
26407047--26407084
20
2.0
20
94
5
69
23
28
15
31
1.96
26410124--26410170
25
1.9
24
82
4
58
53
10
17
19
1.72
26411265--26411339
33
2.2
34
90
2
116
42
12
6
38
1.68
26413109--26413146
18
2.1
18
90
9
60
5
21
2
71
1.19
26415094--26415140
25
1.9
24
82
4
58
53
10
17
19
1.72
26420569--26420792
40
5.7
40
82
9
255
24
21
27
25
1.99
26420573--26420792
79
2.8
79
82
7
259
25
21
27
25
1.99
26420576--26420825
79
3.2
79
81
7
224
26
20
27
25
1.99
26428455--26428677
78
2.8
80
83
6
276
24
21
28
25
1.99
26428455--26428677
40
5.7
40
84
7
278
24
21
28
25
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26428508--26428710
79
2.6
79
85
5
225
26
20
28
25
1.99
26445956--26446277
47
6.8
47
90
2
482
33
8
30
28
1.86
26445957--26446277
96
3.4
96
93
0
520
33
8
30
28
1.86
26445956--26446277
143
2.3
144
91
3
519
33
8
30
28
1.86
26447325--26447398
36
2.1
36
100
0
148
22
2
35
39
1.69
26456942--26457165
40
5.7
40
85
6
287
24
22
27
25
2.00
26456942--26457165
79
2.8
79
85
6
283
24
22
27
25
2.00
26456942--26457198
79
3.2
80
82
7
233
25
21
27
24
1.99
26467729--26467773
18
2.5
18
96
0
81
8
17
2
71
1.23
26470031--26470126
33
3.2
33
65
27
93
43
15
9
31
1.78
26476047--26476090
18
2.3
19
84
7
54
36
2
0
61
1.09
26478121--26478342
77
2.8
79
80
13
269
26
22
27
24
2.00
26478121--26478342
40
5.7
40
85
8
262
26
22
27
24
2.00
26488897--26488941
18
2.5
18
96
0
81
8
17
2
71
1.23
26488901--26488958
30
1.9
30
82
6
73
6
20
3
68
1.27
26491200--26491295
33
3.2
33
65
27
93
43
15
9
31
1.78
26498889--26498913
13
1.9
13
100
0
50
24
16
28
32
1.96
26499543--26499567
12
2.1
12
100
0
50
16
16
16
52
1.76
26508295--26508346
27
1.9
27
96
0
95
21
23
15
40
1.91
26511698--26511732
18
1.9
18
88
11
54
22
20
0
57
1.41
26511720--26511831
6
18.0
6
67
5
62
8
19
0
70
1.19
26511778--26511831
24
2.2
25
86
3
74
7
20
0
72
1.08
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26511814--26511844
16
1.9
16
93
0
53
0
12
3
83
0.75
26511965--26512011
20
2.3
20
85
0
67
29
36
12
21
1.91
26513537--26513588
9
6.0
9
80
15
65
86
0
13
0
0.57
26513539--26513588
16
3.0
16
85
5
64
86
0
14
0
0.58
26513537--26513587
19
2.5
20
87
6
68
88
0
11
0
0.52
26513537--26513594
20
2.6
22
81
15
75
84
0
13
1
0.70
26514614--26514717
48
2.2
47
84
10
131
59
1
24
14
1.45
26516388--26516434
20
2.3
20
85
0
67
29
36
12
21
1.91
26522454--26522506
27
2.0
27
85
7
72
49
15
9
26
1.74
26528352--26528376
10
2.5
10
100
0
50
48
16
12
24
1.79
26532036--26532086
25
2.1
24
85
7
68
68
3
19
7
1.30
26532073--26532110
15
2.4
17
86
8
53
60
10
15
13
1.59
26538640--26538903
40
6.7
40
88
5
349
25
28
21
24
1.99
26538640--26538903
118
2.2
121
85
5
360
25
28
21
24
1.99
26546530--26546698
40
4.2
40
90
2
243
27
27
20
24
1.99
26546530--26546747
80
2.7
80
81
5
255
26
26
21
25
1.99
26546532--26546747
119
1.8
120
83
7
287
26
26
21
25
1.99
26546530--26546753
79
2.8
78
78
8
220
26
26
21
25
2.00
26547879--26547999
56
2.2
56
100
0
242
22
23
9
43
1.83
26548704--26548756
23
2.3
23
87
9
72
32
13
9
45
1.75
26557288--26557356
20
3.5
20
76
7
68
26
28
13
31
1.93
26567215--26567307
19
5.1
19
72
12
86
30
10
12
46
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26567196--26567310
54
2.1
54
95
0
203
30
10
14
44
1.79
26571322--26571382
21
3.0
22
81
15
60
70
0
21
8
1.13
26571349--26571394
21
2.1
22
84
4
58
67
2
23
6
1.25
26583093--26583154
23
2.7
23
80
9
72
29
3
27
40
1.72
26586281--26586448
62
2.7
62
84
0
228
25
25
23
25
2.00
26586280--26586473
62
3.1
63
73
11
186
25
26
23
24
2.00
26588144--26588323
39
4.6
39
84
0
198
44
21
4
30
1.71
26588144--26588323
78
2.3
78
85
1
236
44
21
4
30
1.71
26590328--26590402
33
2.2
34
88
2
107
44
14
5
36
1.68
26592150--26592193
18
2.4
18
88
11
63
4
20
2
72
1.13
26592150--26592204
18
3.0
17
84
12
56
5
21
3
69
1.25
26594454--26594480
9
3.0
9
100
0
54
33
22
11
33
1.89
26595151--26595189
19
2.1
19
100
0
78
30
10
30
28
1.90
26597180--26597217
19
2.0
20
89
5
60
21
34
7
36
1.82
26598536--26599516
328
3.0
329
96
0
1842
36
18
12
33
1.88
26602132--26602165
17
2.1
16
88
5
50
38
0
14
47
1.45
26605684--26605731
17
3.1
14
82
14
51
75
0
20
4
0.97
26608258--26608291
17
2.1
16
88
5
50
38
0
14
47
1.45
26610101--26610138
19
2.0
20
94
5
69
18
34
10
36
1.85
26610330--26610371
16
2.6
16
77
7
50
26
4
4
64
1.33
26610612--26610653
17
2.4
18
80
4
50
73
2
11
11
1.18
26611754--26611805
13
4.0
12
76
16
50
63
0
23
13
1.29
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26612671--26612724
16
3.4
15
77
10
54
70
3
11
14
1.29
26617014--26617051
19
2.0
20
94
5
69
36
10
34
18
1.85
26621853--26621884
16
2.0
16
100
0
64
31
12
0
56
1.37
26623298--26623342
21
2.1
21
84
8
56
66
0
22
11
1.22
26625235--26625271
18
2.1
18
90
5
58
40
0
10
48
1.38
26626051--26626126
34
2.2
34
92
0
125
35
6
13
44
1.69
26644718--26644756
20
2.0
20
89
0
60
35
15
23
25
1.94
26644761--26644799
19
2.0
20
95
5
71
41
15
30
12
1.85
26647803--26647844
15
2.8
15
88
0
57
11
16
0
71
1.14
26648732--26648770
21
1.9
21
89
5
62
17
15
0
66
1.25
26650231--26650411
40
4.6
40
81
6
208
25
28
21
24
1.99
26650233--26650411
79
2.2
80
81
7
204
25
27
21
25
1.99
26658240--26658423
40
4.6
39
78
7
167
26
27
21
24
1.99
26666598--26666660
32
2.0
33
84
9
87
38
15
19
26
1.92
26667540--26667589
24
2.0
24
84
3
64
40
8
26
26
1.83
26671596--26671642
24
1.9
25
82
4
60
42
4
25
27
1.73
26673556--26673581
9
2.9
9
100
0
52
69
11
0
19
1.18
26675970--26676103
50
2.6
50
77
6
128
40
14
12
32
1.84
26680015--26680143
49
2.6
49
79
6
136
24
24
20
31
1.98
26708179--26708225
23
2.1
23
84
7
62
51
12
4
31
1.59
26717880--26717911
4
8.0
4
92
0
55
21
0
0
78
0.76
26719722--26719882
62
2.6
60
83
8
166
26
24
22
26
2.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26726814--26726858
14
3.3
14
84
6
65
48
13
0
37
1.42
26734742--26734796
1
55.0
1
92
0
92
0
1
1
96
0.26
26747822--26747874
18
2.9
18
88
2
70
66
7
5
20
1.38
26751884--26751914
13
2.4
13
100
0
62
74
0
6
19
1.03
26754559--26754610
23
2.3
22
75
21
54
9
23
1
65
1.32
26754568--26754623
12
4.7
12
74
14
53
12
23
0
64
1.27
26759613--26759643
12
2.6
12
100
0
62
80
6
0
12
0.89
26759687--26759740
16
3.5
15
92
7
90
64
5
11
18
1.44
26759687--26759740
17
3.3
17
92
5
85
64
5
11
18
1.44
26762321--26762545
40
5.7
40
82
5
233
25
27
21
25
1.99

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211