Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_D06
Parameters: 2 7 7 80 10 50 1000
Length:  62964862

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   

This is table  15  of  207  ( 24831 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4814971--4815107
44
3.2
43
63
16
102
27
21
24
26
2.00
4814921--4815650
86
8.5
86
90
2
1092
30
22
23
24
1.99
4814921--4815646
257
2.8
257
90
2
1134
29
22
23
24
1.99
4815078--4815469
44
9.1
44
62
17
142
29
21
24
24
1.99
4815703--4815907
44
4.7
44
90
1
277
29
20
26
23
1.98
4815622--4815909
44
6.6
45
82
5
259
30
19
25
23
1.98
4815898--4816037
44
3.3
43
81
10
153
27
22
24
25
1.99
4817458--4817486
3
9.7
3
100
0
58
34
0
0
65
0.93
4818030--4818060
16
1.9
16
93
0
53
35
6
3
54
1.42
4820348--4820382
18
1.9
18
94
0
61
54
11
25
8
1.64
4833733--4833760
3
9.3
3
100
0
56
67
0
0
32
0.91
4838893--4838917
11
2.3
11
100
0
50
68
0
0
32
0.90
4842028--4842093
20
3.3
20
72
4
71
54
9
16
19
1.68
4842017--4842098
39
2.1
39
95
0
146
53
7
18
20
1.68
4842980--4843028
20
2.5
20
79
0
62
40
8
0
51
1.32
4842919--4843125
98
2.1
99
88
1
308
33
8
4
52
1.53
4845378--4845423
24
1.9
24
82
8
58
41
15
28
15
1.87
4850862--4851537
132
5.1
132
89
0
1003
29
18
22
30
1.97
4851489--4851648
44
3.6
44
91
0
257
25
16
28
29
1.97
4850869--4851672
396
2.0
394
82
4
911
29
18
22
29
1.97
4852240--4852305
20
3.3
20
72
4
71
54
9
16
19
1.68
4852229--4852310
39
2.1
39
97
0
155
52
7
19
20
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4852228--4852286
19
3.1
19
70
4
64
54
6
20
18
1.66
4853197--4853245
20
2.5
20
79
0
62
40
8
0
51
1.32
4853134--4853342
100
2.1
99
87
3
294
33
8
4
52
1.53
4869932--4869975
7
6.4
7
84
10
56
86
2
11
0
0.66
4869920--4869961
10
4.2
10
76
11
50
85
2
11
0
0.68
4869920--4869975
16
3.5
15
81
11
67
83
3
12
0
0.76
4869920--4869975
21
2.6
20
86
11
67
83
3
12
0
0.76
4871233--4871402
50
3.4
50
75
0
178
31
24
18
25
1.98
4870946--4871397
99
4.5
98
80
5
496
30
22
21
25
1.99
4871420--4872176
127
6.0
127
91
0
1226
31
22
21
24
1.98
4872574--4872614
19
2.2
19
91
8
66
58
36
0
4
1.20
4876003--4876117
56
2.1
56
98
0
221
38
11
13
36
1.81
4876605--4876816
45
4.5
49
72
12
183
27
25
17
28
1.98
4876607--4876816
94
2.2
94
99
0
411
27
25
17
29
1.98
4876988--4877012
7
3.6
7
100
0
50
44
16
0
40
1.47
4879641--4879679
20
2.0
20
89
0
60
43
23
15
17
1.87
4883716--4883745
2
15.0
2
92
0
51
50
46
3
0
1.18
4883865--4883907
21
2.0
21
95
0
77
20
18
20
39
1.93
4887010--4887050
21
2.0
21
90
0
64
19
29
21
29
1.98
4889821--4889890
36
1.9
36
85
0
95
31
18
10
40
1.84
4890454--4890495
19
2.2
19
83
8
50
61
0
11
26
1.30
4891321--4891351
16
1.9
16
100
0
62
32
19
6
41
1.77
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4896944--4897023
20
3.3
24
68
23
60
21
11
0
67
1.21
4896953--4897002
20
2.2
24
86
13
72
24
10
0
66
1.22
4897257--4897298
15
2.8
15
88
0
57
30
4
4
59
1.39
4900088--4900131
21
2.1
21
91
0
70
29
25
13
31
1.94
4903516--4903580
15
4.4
14
73
19
53
73
1
1
23
1.00
4903545--4903588
23
2.0
22
90
4
70
75
2
0
22
0.92
4903507--4903588
19
4.6
16
72
19
65
73
1
2
23
1.03
4908532--4908622
28
3.1
28
77
12
94
63
2
5
28
1.28
4908835--4908885
26
1.9
27
88
4
77
35
0
0
64
0.94
4908862--4908906
20
2.2
20
96
4
81
35
0
0
64
0.94
4908835--4908918
26
3.5
26
70
26
76
36
0
0
63
0.95
4908925--4909137
87
2.5
87
79
6
222
32
8
20
38
1.83
4912196--4912500
98
3.1
97
74
8
276
31
11
11
45
1.76
4912098--4912429
97
3.4
95
73
8
283
30
13
11
44
1.79
4911997--4912530
195
2.7
194
78
3
563
32
11
11
44
1.77
4913024--4913073
26
1.9
26
91
0
82
44
12
10
34
1.75
4913544--4913596
26
2.0
26
92
0
88
41
15
9
33
1.79
4913887--4913916
12
2.5
12
94
0
51
63
0
0
36
0.95
4913948--4913980
15
2.1
16
88
5
50
48
0
0
51
1.00
4917848--4917898
27
1.9
26
96
4
93
41
0
5
52
1.25
4921923--4921957
12
3.0
12
87
8
54
65
8
11
14
1.46
4924695--4924719
11
2.3
11
100
0
50
72
0
8
20
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4926322--4926375
27
2.0
28
88
3
83
24
5
12
57
1.57
4929134--4929163
6
5.2
6
96
4
53
86
0
13
0
0.57
4939097--4939146
25
2.0
25
100
0
100
32
16
8
44
1.76
4940612--4940665
14
3.9
14
79
13
58
27
20
7
44
1.78
4944033--4944329
99
3.0
99
80
2
319
28
19
18
34
1.95
4944398--4944430
16
2.1
16
100
0
66
39
6
6
48
1.53
4950624--4950667
10
4.2
10
77
11
52
63
2
2
31
1.19
4960601--4961470
304
2.9
302
84
5
1078
41
18
7
32
1.79
4968646--4968756
56
2.0
56
80
7
127
45
3
5
45
1.43
4970892--4970933
20
2.1
20
100
0
84
47
4
9
38
1.57
4970927--4970965
18
2.1
19
86
13
55
46
10
10
33
1.72
4970917--4971640
312
2.3
309
87
4
1044
41
18
7
31
1.79
4974634--4974659
12
2.2
12
100
0
52
15
0
7
76
0.99
4974899--4975000
26
4.0
25
75
13
91
31
2
4
60
1.32
4975754--4975790
6
6.5
6
84
12
51
83
0
16
0
0.64
4975751--4975792
16
2.6
16
92
0
66
83
0
16
0
0.65
4976682--4976795
44
2.6
44
77
1
120
26
23
24
25
2.00
4976684--4977127
143
3.1
141
85
6
589
29
20
22
28
1.98
4977145--4977410
44
5.9
44
75
7
205
33
19
19
27
1.96
4977196--4977404
87
2.3
88
79
8
208
29
19
22
28
1.98
4978977--4979045
26
2.6
26
81
2
66
28
5
5
59
1.44
4979062--4979095
17
2.0
17
88
0
50
38
5
0
55
1.24
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4979060--4979095
19
2.0
17
89
10
54
38
5
0
55
1.23
4979097--4979160
25
2.7
24
76
11
69
17
1
6
75
1.09
4979115--4979205
25
3.8
25
71
9
73
21
1
7
69
1.20
4982610--4982899
99
2.9
99
75
4
289
30
21
14
34
1.93
4991956--4991999
21
2.1
21
82
0
52
34
13
34
18
1.90
4995395--4995421
3
9.0
3
100
0
54
0
0
66
33
0.92
4996333--4996366
17
2.0
17
94
0
59
44
50
0
5
1.26
5000962--5000995
17
2.0
17
94
0
59
44
50
0
5
1.26
5002722--5002965
121
2.0
121
98
0
472
44
9
9
36
1.68
5003683--5003708
12
2.2
12
100
0
52
0
7
15
76
0.99
5006083--5006325
90
2.7
89
75
9
228
57
13
4
24
1.55
5006959--5007163
107
1.9
106
82
7
252
33
21
17
27
1.95
5007549--5007596
15
3.3
15
82
5
71
20
2
8
68
1.26
5010013--5010051
12
2.9
14
88
11
55
25
5
0
69
1.09
5010014--5010076
15
3.9
15
76
17
56
25
4
0
69
1.07
5010013--5010078
25
2.6
27
81
13
70
25
4
0
69
1.07
5017193--5017242
6
8.0
6
84
8
64
82
0
14
4
0.82
5017193--5017242
13
4.0
12
82
10
64
82
0
14
4
0.82
5018175--5018199
11
2.3
11
100
0
50
92
0
0
8
0.40
5020751--5021305
143
3.9
143
89
0
806
28
19
23
28
1.98
5021250--5021383
45
3.0
45
69
8
121
30
23
23
23
1.99
5021063--5021487
232
1.8
232
83
3
568
30
20
22
26
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5021195--5021345
44
3.4
44
76
5
160
25
23
23
26
2.00
5021206--5021383
89
2.0
89
88
2
268
29
23
23
24
1.99
5022847--5022885
12
2.9
14
88
11
55
25
5
0
69
1.09
5022848--5022886
15
2.6
15
80
12
53
25
5
0
69
1.09
5031677--5031719
21
2.0
21
82
8
52
20
6
11
60
1.54
5032673--5032716
3
14.7
3
100
0
88
31
0
0
68
0.90
5036508--5036536
2
14.5
2
100
0
58
0
51
0
48
1.00
5064106--5064302
104
1.9
103
98
1
360
38
25
12
23
1.90
5068554--5068802
50
4.8
50
85
4
284
20
29
24
26
1.99
5068553--5068802
100
2.4
104
88
6
357
20
29
24
26
1.99

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207