Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_D06
Parameters: 2 7 7 80 10 50 1000
Length:  62964862

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   

This is table  192  of  207  ( 24831 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57954527--57954572
19
2.4
19
82
7
58
58
0
6
34
1.24
57954542--57954599
19
3.1
18
75
18
55
60
1
1
36
1.17
57959762--57959811
25
2.0
25
100
0
100
16
8
20
56
1.65
57960800--57960824
9
2.8
9
100
0
50
40
0
0
60
0.97
57965322--57965346
13
1.9
13
100
0
50
40
0
36
24
1.55
57972358--57972387
12
2.4
12
94
5
51
43
6
0
50
1.28
57974571--57974632
19
3.2
19
71
8
52
59
0
3
37
1.13
57974861--57974888
2
14.0
2
100
0
56
50
0
0
50
1.00
57976719--57976766
20
2.4
19
75
6
51
37
0
10
52
1.36
57977649--57977727
6
13.2
6
100
0
158
34
0
16
49
1.46
57979515--57979699
92
2.0
92
100
0
370
35
12
15
36
1.86
57981354--57981416
21
3.0
20
77
8
63
36
17
28
17
1.93
57982912--57982961
9
5.6
9
75
15
50
38
4
0
58
1.17
57982913--57982995
28
3.0
28
75
5
71
33
4
2
59
1.32
57983042--57983092
22
2.4
22
80
9
61
25
3
3
66
1.26
57983044--57983091
23
2.1
23
84
3
62
27
4
2
66
1.21
57983276--57983312
3
12.3
3
100
0
74
32
0
0
67
0.91
57991482--57991521
20
2.0
20
85
9
55
70
5
5
20
1.26
57992836--57992863
2
14.0
2
100
0
56
50
0
0
50
1.00
58004710--58004745
18
2.0
18
88
0
54
11
25
2
61
1.43
58004735--58004764
6
4.8
6
95
4
51
13
3
0
83
0.77
58005309--58005343
16
2.2
16
89
0
52
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58007059--58007149
41
2.2
43
78
7
98
49
14
14
21
1.78
58009153--58009242
3
30.0
3
87
0
72
33
11
1
54
1.43
58013125--58013224
43
2.3
43
84
0
128
26
29
19
26
1.98
58016800--58016884
39
2.2
39
85
4
109
21
22
18
37
1.94
58016887--58016933
23
2.0
23
92
8
78
29
0
4
65
1.11
58017160--58017200
21
1.9
22
90
5
66
39
36
0
24
1.56
58017160--58017206
21
2.2
22
84
3
60
44
31
0
23
1.54
58017393--58017434
16
2.5
17
92
7
68
45
0
0
54
0.99
58017683--58017733
22
2.3
23
77
16
63
45
25
1
27
1.64
58018022--58018067
20
2.4
20
82
7
51
63
4
4
28
1.33
58018074--58018225
41
3.7
41
90
0
241
30
28
21
19
1.97
58018880--58018925
17
2.8
18
84
15
64
28
41
30
0
1.56
58020486--58020521
18
2.0
18
88
0
54
36
13
33
16
1.89
58020489--58020532
18
2.3
20
75
25
51
38
13
34
13
1.84
58021492--58021525
15
2.3
15
94
0
59
44
11
29
14
1.81
58027795--58027824
6
4.8
6
95
4
51
16
30
0
53
1.44
58035764--58035811
4
12.0
4
100
0
96
50
25
0
25
1.50
58036067--58036370
110
2.8
109
88
2
425
29
17
20
32
1.96
58048008--58048360
46
8.2
43
72
11
197
31
20
20
26
1.98
58048008--58048360
87
4.1
88
74
11
239
31
20
20
26
1.98
58048220--58048337
44
2.7
44
83
6
141
27
23
23
24
2.00
58048975--58049064
46
2.0
46
93
0
153
43
37
11
7
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58050162--58050226
28
2.7
23
75
17
60
36
10
3
49
1.53
58050411--58050474
27
2.4
25
78
14
67
35
9
3
51
1.50
58050635--58050665
5
6.4
5
96
3
55
19
0
0
80
0.71
58061340--58061382
15
2.9
15
78
0
50
25
2
30
41
1.68
58065029--58065071
13
3.3
13
80
0
50
44
0
0
55
0.99
58066548--58066611
23
2.8
22
85
7
74
64
3
3
29
1.24
58066552--58066605
15
3.4
16
82
10
67
61
3
3
31
1.31
58068152--58068420
131
2.0
132
89
0
414
27
24
20
27
1.99
58068440--58068627
100
1.9
99
91
4
306
25
24
20
29
1.99
58068448--58068622
50
3.5
50
70
6
149
24
25
20
29
1.99
58080546--58080608
3
21.7
3
74
18
53
63
3
3
30
1.25
58080561--58080612
15
3.5
15
80
15
63
63
1
1
32
1.16
58090389--58090444
24
2.5
22
80
11
60
17
8
5
67
1.36
58094960--58095016
23
2.5
23
91
0
87
40
17
19
22
1.91
58096264--58096318
3
18.3
3
75
14
51
61
1
1
34
1.17
58096266--58096321
16
3.5
16
75
4
51
62
1
1
33
1.16
58097707--58097764
29
2.0
29
83
6
73
56
0
6
36
1.26
58098855--58098879
13
1.9
13
100
0
50
44
32
0
24
1.54
58098982--58099020
13
2.9
14
80
7
53
33
7
20
38
1.81
58099589--58099622
16
2.1
17
88
5
52
61
5
32
0
1.20
58101207--58101250
21
2.1
21
83
8
54
13
13
9
63
1.51
58109291--58109366
38
2.0
38
94
0
134
50
32
10
6
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58128278--58128304
3
9.0
3
100
0
54
66
33
0
0
0.92
58130026--58130064
14
2.8
14
84
0
51
56
7
2
33
1.41
58131801--58131857
11
5.3
11
77
10
64
1
8
15
73
1.16
58131819--58131866
22
2.2
22
88
0
69
6
12
12
68
1.37
58135347--58135460
44
2.6
44
83
5
140
26
27
14
31
1.95
58135570--58135832
50
5.3
50
69
1
177
26
23
20
30
1.98
58135596--58135881
100
2.9
101
86
5
402
25
23
21
29
1.99
58135704--58135878
50
3.5
50
72
6
156
25
25
20
28
1.99
58137123--58137167
22
2.1
21
88
12
65
15
15
0
68
1.21
58138022--58138067
23
2.0
23
86
0
65
65
8
15
10
1.47
58144646--58144676
14
2.1
15
94
5
55
41
6
0
51
1.27
58147158--58147191
2
18.0
2
88
11
54
52
0
0
47
1.00
58151768--58151809
22
1.9
22
85
0
57
40
9
11
38
1.75
58152616--58152655
21
1.9
21
89
0
62
32
7
15
45
1.74
58162056--58162237
90
2.0
90
97
0
346
32
17
15
33
1.92
58166586--58166702
61
2.0
58
93
5
198
47
16
10
26
1.78
58172874--58172933
29
2.1
29
87
0
84
41
15
11
31
1.82
58174464--58174513
2
25.0
2
100
0
100
0
0
50
50
1.00
58178827--58178866
20
2.0
20
90
0
62
50
12
10
27
1.72
58182170--58182217
22
2.1
23
84
3
62
25
2
10
62
1.38
58182096--58182213
54
2.2
54
81
3
148
29
2
12
55
1.51
58189059--58189191
40
3.3
39
80
6
144
36
19
21
23
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58189076--58189210
40
3.4
38
80
6
146
39
21
19
20
1.93
58189247--58189487
82
3.0
80
77
8
227
23
23
24
28
2.00
58189252--58189487
123
1.9
123
86
3
332
23
22
24
28
1.99
58189252--58189488
41
5.8
41
74
7
203
24
22
24
28
1.99
58189775--58189808
15
2.2
16
94
5
61
17
2
32
47
1.63
58190254--58190299
23
2.0
23
91
0
74
19
2
50
28
1.60
58190615--58190767
83
1.9
80
91
4
252
58
4
10
26
1.51
58197017--58197386
87
4.3
87
74
11
242
27
21
20
31
1.98
58197057--58197386
44
7.6
43
73
11
234
26
21
21
30
1.98
58198602--58198626
1
25.0
1
100
0
50
0
0
0
100
0.00
58212018--58212051
12
2.8
12
86
0
50
47
14
8
29
1.75
58212091--58212168
16
5.2
16
66
17
60
46
23
2
28
1.65
58212094--58212173
29
2.8
29
98
0
151
45
25
2
27
1.66
58217436--58217606
66
2.6
65
84
4
209
39
18
28
12
1.88
58217577--58217649
21
3.5
21
79
3
76
34
17
41
6
1.76
58217594--58217668
21
3.6
21
81
0
78
36
16
42
5
1.70
58217990--58218268
86
3.2
86
84
4
312
22
17
30
30
1.97
58218009--58218255
129
1.9
129
81
8
297
22
17
29
30
1.96
58218009--58218281
43
6.3
43
74
7
232
21
17
30
31
1.96
58218470--58218512
22
2.0
22
95
0
77
41
27
20
9
1.83
58218815--58218848
18
1.9
18
88
5
52
61
0
2
35
1.11
58218815--58218848
17
1.9
17
88
5
50
61
0
2
35
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58218794--58218844
25
2.0
25
92
7
86
62
0
1
35
1.06
58219148--58219187
16
2.5
16
95
0
71
37
15
17
30
1.90
58220697--58220732
17
2.1
17
100
0
72
5
5
22
66
1.34
58221261--58221299
20
2.0
20
89
0
60
28
10
12
48
1.74
58224774--58224814
21
1.9
22
85
5
57
53
2
4
39
1.35
58225617--58225659
18
2.4
19
80
11
54
53
0
4
41
1.21
58225992--58226041
26
1.9
26
83
0
64
62
4
0
34
1.14
58225985--58226095
10
11.8
10
68
18
53
63
3
1
30
1.21
58226157--58226208
19
2.7
19
79
5
52
57
0
5
36
1.23
58229425--58229464
9
4.4
9
93
6
64
65
10
0
25
1.24

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207