Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_D06
Parameters: 2 7 7 80 10 50 1000
Length:  62964862

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   

This is table  202  of  207  ( 24831 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60771940--60772150
85
2.5
85
83
6
230
31
23
21
22
1.98
60772234--60772488
46
5.8
45
74
12
206
29
20
23
26
1.99
60772112--60772530
44
9.7
44
71
12
205
30
20
22
26
1.98
60772112--60772494
174
2.2
169
90
4
590
30
19
22
26
1.98
60772285--60772523
130
1.9
128
80
8
279
28
20
23
27
1.99
60772520--60772563
21
2.1
21
87
8
63
36
25
34
4
1.76
60774195--60774255
15
4.1
15
73
10
54
24
3
8
63
1.37
60776417--60776447
15
2.1
15
93
0
53
51
19
9
19
1.74
60777314--60777386
29
2.5
30
82
10
82
42
0
2
54
1.14
60777910--60777952
17
2.6
16
79
13
52
27
0
2
69
1.00
60778174--60778288
55
2.1
55
100
0
230
54
1
5
38
1.33
60779092--60779124
16
2.0
16
94
5
57
60
0
0
39
0.97
60780321--60780364
22
1.9
24
86
9
65
40
6
2
50
1.42
60783009--60783067
17
3.5
16
75
11
64
28
10
1
59
1.40
60788631--60788663
17
1.9
17
93
0
57
9
0
39
51
1.34
60808224--60808263
20
2.0
21
95
5
73
65
0
2
32
1.06
60808501--60808525
12
2.1
12
100
0
50
68
0
0
32
0.90
60809011--60809084
9
7.7
9
70
19
51
28
0
5
66
1.14
60809850--60809914
32
2.0
32
100
0
130
66
15
6
12
1.43
60822226--60822281
15
3.9
15
75
6
55
37
1
0
60
1.07
60822220--60822281
21
2.9
21
80
4
70
33
1
0
64
1.03
60828552--60828693
37
3.8
36
78
5
140
22
15
26
35
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60828552--60828693
74
1.9
74
83
8
182
22
15
26
35
1.94
60841260--60841526
130
2.1
129
89
2
419
25
26
20
28
1.99
60841590--60842347
132
5.7
132
93
0
1282
30
25
16
27
1.97
60842721--60842916
108
1.8
108
90
0
320
47
11
17
23
1.80
60853658--60853858
109
1.8
109
86
0
294
31
17
19
30
1.95
60854066--60854095
15
2.0
15
93
0
51
63
0
6
30
1.20
60854179--60854209
15
2.1
15
100
0
62
61
0
6
32
1.21
60854527--60854583
17
3.4
17
76
9
62
63
3
7
26
1.36
60854559--60854625
3
21.3
3
79
8
71
59
2
7
29
1.40
60855530--60855582
26
2.0
26
85
7
72
81
3
5
9
0.98
60855532--60855586
19
2.8
19
76
10
58
81
3
5
9
0.95
60855856--60855906
21
2.4
22
90
3
77
15
3
49
31
1.63
60856393--60856761
44
8.3
44
76
3
258
30
24
15
29
1.96
60856723--60857549
134
6.2
134
98
0
1582
28
23
21
26
1.99
60863226--60863426
109
1.8
109
86
0
294
31
17
19
30
1.95
60863634--60863663
15
2.0
15
93
0
51
63
0
6
30
1.20
60863746--60863776
15
2.1
15
100
0
62
61
0
6
32
1.21
60864093--60864149
17
3.4
17
76
9
62
63
3
7
26
1.36
60864125--60864191
3
21.3
3
79
8
71
59
2
7
29
1.40
60865098--60865150
19
2.7
19
80
8
52
83
3
3
9
0.90
60865097--60865152
26
2.2
24
82
14
69
83
3
3
8
0.87
60865426--60865478
22
2.4
22
93
0
88
13
3
52
30
1.57
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60865810--60865857
16
3.1
15
90
6
69
64
2
2
31
1.16
60865806--60865857
8
6.5
8
82
8
61
65
1
1
30
1.14
60865805--60865861
24
2.4
24
79
5
71
64
1
3
29
1.20
60865986--60866072
25
3.7
24
79
10
83
55
5
6
32
1.50
60866097--60866230
25
5.6
25
70
15
86
58
2
3
35
1.28
60866753--60866914
30
5.4
30
91
1
261
22
4
46
26
1.70
60866756--60866914
61
2.6
60
91
2
255
22
4
46
26
1.70
60875715--60875765
24
2.1
22
77
19
57
49
0
0
50
1.00
60881523--60881551
13
2.1
14
93
6
51
37
0
0
62
0.96
60881521--60881569
23
2.3
20
83
13
62
36
0
0
63
0.95
60881984--60882017
17
2.0
17
94
0
59
35
2
17
44
1.64
60884049--60884079
16
1.9
16
93
0
53
35
6
3
54
1.42
60885801--60885842
19
2.2
19
84
16
52
59
16
4
19
1.54
60885797--60885835
19
2.1
18
86
13
53
58
15
5
20
1.55
60887462--60887593
37
3.4
39
80
7
151
31
24
18
25
1.97
60887462--60887594
41
3.4
41
76
11
134
32
24
18
25
1.97
60888510--60888600
35
2.6
36
77
10
98
43
4
2
49
1.34
60895132--60895188
28
2.0
28
82
0
69
26
22
10
40
1.86
60896105--60896132
4
7.0
4
100
0
56
50
0
0
50
1.00
60896958--60897005
20
2.3
22
75
14
55
45
0
0
54
0.99
60896966--60897003
20
1.9
20
88
0
58
44
0
0
55
0.99
60902192--60902271
31
2.6
30
84
5
90
32
5
13
48
1.64
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60902192--60902280
29
3.0
29
79
11
74
32
5
13
48
1.66
60902405--60902494
31
3.0
30
77
6
92
44
5
8
41
1.59
60903477--60903516
20
2.0
20
90
0
62
37
2
2
57
1.26
60906209--60906247
16
2.4
16
91
0
60
61
0
0
38
0.96
60910338--60910393
27
2.1
27
82
0
67
48
0
35
16
1.46
60918848--60918893
23
2.0
24
95
4
85
36
2
0
60
1.09
60933053--60933433
69
5.5
69
91
1
595
37
13
24
24
1.92
60947459--60947521
29
2.2
29
85
0
81
52
3
1
42
1.27
60947755--60947794
20
2.0
21
85
5
55
57
0
0
42
0.98
60956866--60957039
69
2.5
68
92
1
276
36
13
24
25
1.92
60959067--60959139
28
2.6
29
86
4
112
38
4
13
43
1.63
60959747--60959779
15
2.2
15
100
0
66
45
36
0
18
1.49
60963561--60963593
16
2.0
17
88
5
50
51
12
6
30
1.63
60963800--60963824
13
1.9
13
100
0
50
56
0
12
32
1.36
60965163--60965206
22
2.0
22
100
0
88
31
0
22
45
1.53
60965355--60965381
5
5.4
5
100
0
54
59
0
0
40
0.98
60965404--60965446
5
8.8
5
97
2
79
41
0
0
58
0.98
60966443--60966499
22
2.6
23
80
8
73
12
24
19
43
1.85
60968135--60968178
22
2.0
22
82
8
54
63
0
6
29
1.20
60972702--60972742
21
2.0
21
81
18
50
21
26
19
31
1.97
60988573--60988665
18
5.2
18
84
0
123
33
15
22
29
1.94
60988573--60988665
36
2.6
36
91
0
141
33
15
22
29
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60995975--60996107
27
4.9
27
94
1
205
18
20
37
24
1.94
60996170--60996216
18
2.5
20
79
10
62
63
2
34
0
1.06
60996166--60996219
22
2.4
23
84
12
76
64
1
33
0
1.04
60999541--60999584
6
7.3
6
81
0
52
2
34
29
34
1.70
60999541--60999587
24
2.0
24
86
0
67
2
34
31
31
1.70
61001290--61001372
39
2.2
38
95
2
148
38
2
3
55
1.30
61001568--61001907
27
14.1
26
74
21
266
53
12
1
32
1.48
61001657--61001907
49
5.2
49
87
3
366
53
12
1
31
1.48
61001663--61001907
97
2.5
97
93
1
420
53
12
1
32
1.48
61001883--61002041
21
7.7
21
71
15
100
55
12
0
31
1.37
61001856--61002112
122
2.1
123
81
11
296
54
11
0
33
1.40
61002210--61002246
14
2.5
14
91
8
56
0
40
0
59
0.97
61002208--61002249
14
3.2
13
83
12
50
0
38
0
61
0.96
61002433--61002458
13
2.0
13
100
0
52
15
23
15
46
1.83
61002480--61002514
16
2.1
17
89
5
54
42
0
0
57
0.99
61007369--61007461
18
5.2
18
81
0
114
33
13
22
30
1.93
61007381--61007461
36
2.2
36
88
0
135
33
13
22
30
1.93
61010549--61010590
15
2.9
15
80
16
52
40
0
2
57
1.12
61011142--61011184
21
2.1
21
86
4
61
60
4
4
30
1.37
61012593--61012636
23
1.9
23
81
9
54
54
0
2
43
1.12
61013204--61013255
24
2.2
24
89
0
77
55
9
1
32
1.43
61015175--61015226
24
2.2
24
85
0
68
53
11
1
32
1.48
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61017651--61017693
16
2.6
16
85
10
52
37
0
4
58
1.19
61017647--61017693
17
2.8
17
78
15
53
36
0
4
59
1.17
61018785--61018862
40
2.0
40
82
7
97
32
5
19
43
1.73
61025930--61025976
21
2.2
21
81
7
51
61
10
0
27
1.29
61034612--61034667
12
4.5
12
72
14
51
26
19
8
44
1.80
61039773--61039833
6
9.8
6
84
7
68
26
0
0
73
0.83
61039773--61039833
32
2.0
30
93
6
104
26
0
0
73
0.83
61043067--61043091
12
2.1
12
100
0
50
44
0
8
48
1.32
61043708--61043815
41
2.6
41
98
0
207
23
21
29
25
1.99
61053871--61053935
28
2.4
28
89
2
96
49
1
12
36
1.50

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207