Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_D06
Parameters: 2 7 7 80 10 50 1000
Length:  62964862

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   

This is table  9  of  207  ( 24831 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3064567--3064629
31
2.0
32
84
3
83
36
41
3
19
1.67
3064846--3065393
112
4.9
113
81
5
664
28
26
20
24
1.99
3064856--3065393
225
2.4
224
88
3
814
28
26
21
24
1.99
3069445--3069728
140
2.0
139
92
0
469
34
23
10
31
1.88
3077727--3077796
31
2.3
31
84
0
86
37
11
11
40
1.77
3081440--3081564
62
2.0
62
95
0
223
38
16
11
33
1.85
3081575--3081620
23
2.0
23
83
8
58
36
0
0
63
0.95
3097256--3097318
26
2.3
28
86
8
94
39
12
25
22
1.89
3097271--3097318
13
3.7
13
75
10
53
39
12
27
20
1.89
3098132--3098174
22
2.0
22
81
9
52
62
4
9
23
1.44
3098838--3098894
29
2.0
28
82
3
69
50
1
8
38
1.44
3098952--3098982
3
10.7
3
93
6
55
70
0
0
29
0.87
3100350--3100703
129
2.7
129
84
3
426
27
19
20
32
1.97
3100505--3100688
44
4.2
44
70
12
137
27
19
19
33
1.96
3100724--3100890
44
3.8
44
73
7
124
31
22
13
32
1.93
3100829--3101294
44
10.6
44
70
12
253
28
22
19
29
1.98
3100723--3101283
218
2.6
219
87
3
799
29
22
18
30
1.97
3102518--3102557
7
6.0
7
82
11
57
15
17
0
67
1.23
3102518--3102557
13
3.0
14
89
7
57
15
17
0
67
1.23
3102518--3102557
20
2.0
20
95
0
71
15
17
0
67
1.23
3103457--3103518
22
2.9
21
72
15
56
9
11
4
74
1.21
3103418--3103547
40
3.3
39
76
16
135
10
12
6
70
1.35
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3104666--3104698
9
3.7
9
88
12
50
18
0
3
78
0.87
3105326--3105350
13
1.9
13
100
0
50
36
0
8
56
1.29
3105369--3105423
28
1.9
29
85
10
78
10
9
3
76
1.13
3105584--3105640
22
2.6
22
77
0
60
38
8
1
50
1.44
3105742--3105772
5
6.2
5
100
0
62
19
0
0
80
0.71
3110452--3110506
29
2.0
27
82
10
67
50
1
9
38
1.45
3110564--3110594
3
10.7
3
93
6
55
70
0
0
29
0.87
3113639--3113828
62
3.0
62
89
1
290
31
23
13
32
1.93
3125489--3125546
10
5.5
10
82
11
62
44
1
0
53
1.10
3125479--3125538
5
11.2
5
81
12
66
45
0
0
55
0.99
3125479--3125541
32
1.9
34
87
6
94
44
0
0
55
0.99
3126454--3126502
22
2.3
20
86
6
62
46
12
10
30
1.74
3127880--3127907
7
4.0
7
100
0
56
14
0
0
85
0.59
3137765--3137862
31
3.0
34
72
10
96
38
5
11
44
1.62
3138943--3138993
22
2.3
22
80
6
59
68
1
0
29
1.00
3139776--3140301
125
4.2
125
83
3
682
27
17
24
30
1.97
3139773--3140301
251
2.1
250
92
0
869
27
17
24
30
1.97
3142855--3142939
22
3.9
23
76
6
79
20
1
35
43
1.59
3143506--3143545
18
2.2
18
86
0
53
40
7
32
20
1.80
3146209--3146248
18
2.2
18
86
8
55
67
12
0
20
1.22
3146331--3146393
30
2.1
30
96
0
117
55
14
3
26
1.54
3146423--3146465
22
2.0
22
86
9
61
60
13
9
16
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3147004--3147061
27
2.1
27
81
12
66
50
31
1
17
1.56
3148179--3148296
23
5.0
22
71
19
76
29
6
4
59
1.42
3152786--3152819
4
8.2
4
93
6
59
50
0
0
50
1.00
3168932--3168988
30
1.9
30
88
0
87
17
38
24
19
1.93
3170703--3170751
25
2.0
25
84
8
64
51
10
2
36
1.48
3170734--3170761
13
2.2
13
100
0
56
57
0
0
42
0.99
3172408--3172453
21
2.1
21
84
11
58
52
10
6
30
1.62
3179573--3179634
21
3.0
20
84
13
65
37
3
14
45
1.61
3179734--3179777
19
2.3
19
84
11
54
54
6
18
20
1.66
3186961--3186996
18
2.1
18
94
5
65
16
33
38
11
1.84
3190222--3190265
18
2.5
17
79
20
54
43
0
13
43
1.44
3195153--3195291
72
2.0
71
95
2
253
25
5
11
58
1.53
3195818--3196607
228
3.5
228
81
6
897
32
19
21
25
1.97
3195835--3196605
115
6.8
113
81
6
805
32
19
21
25
1.98
3196858--3196965
49
2.2
47
75
12
110
23
1
25
50
1.60
3197108--3197176
21
3.2
20
73
18
59
11
1
40
46
1.49
3197141--3197172
14
2.3
14
94
0
55
9
0
43
46
1.35
3197270--3197309
21
1.9
21
94
0
71
17
0
37
45
1.49
3197271--3197318
21
2.3
21
85
7
62
18
2
35
43
1.62
3198117--3198182
23
2.9
22
76
14
62
16
40
3
39
1.64
3198142--3198221
40
2.0
40
87
0
115
17
45
1
36
1.57
3198165--3198206
15
2.7
16
81
7
50
14
47
2
35
1.57
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3199676--3199736
17
3.9
17
68
24
62
36
4
6
52
1.49
3199672--3199753
28
2.8
30
81
7
114
35
6
7
51
1.55
3199804--3199894
27
3.4
27
90
0
155
45
27
1
26
1.61
3199804--3199897
9
10.4
9
88
0
125
45
26
1
26
1.60
3206350--3206456
41
2.6
41
91
4
173
31
2
0
65
1.07
3206412--3206468
29
2.0
29
93
3
98
33
1
0
64
1.04
3206352--3206475
41
3.1
39
80
13
128
32
2
0
65
1.06
3207629--3207670
18
2.3
18
80
8
50
64
4
7
23
1.38
3221234--3221282
6
8.3
6
81
4
55
77
16
4
2
1.01
3229040--3229109
29
2.3
29
80
4
77
32
14
12
40
1.84
3230888--3230976
30
3.0
29
79
14
83
33
11
12
42
1.78
3232374--3232435
14
4.4
14
76
8
63
40
0
0
59
0.97
3232368--3232426
15
4.2
14
74
20
52
42
0
0
57
0.98
3233392--3233417
3
8.7
3
100
0
52
65
0
0
34
0.93
3235895--3235929
18
1.9
18
88
0
52
40
0
0
60
0.97
3235878--3235932
24
2.3
24
80
0
74
47
0
0
52
1.00
3241917--3242078
78
2.1
78
100
0
324
32
26
12
29
1.92
3243959--3244001
17
2.5
17
96
0
77
39
4
6
48
1.51
3250680--3250711
12
2.5
13
90
10
57
43
9
6
40
1.62
3250705--3250834
66
1.9
67
85
3
181
26
24
16
31
1.97
3256591--3257663
216
5.0
216
87
2
1496
32
18
18
30
1.95
3257644--3257807
83
2.0
83
97
0
310
30
14
15
39
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3265355--3265399
11
4.2
11
80
5
56
73
8
0
17
1.08
3265628--3266096
144
3.1
149
82
10
568
51
7
8
31
1.60
3265743--3266129
153
2.5
149
84
7
499
53
6
8
31
1.57
3266457--3266499
18
2.4
18
81
11
54
32
2
0
65
1.06
3266831--3266860
15
1.9
15
93
6
51
60
6
0
33
1.23
3267769--3267825
25
2.3
25
93
3
98
21
7
28
43
1.78
3270704--3270745
19
2.2
20
83
8
52
57
2
2
38
1.25
3271706--3271760
24
2.3
24
87
3
76
58
0
10
30
1.33
3272984--3273039
28
2.0
29
89
3
87
42
10
3
42
1.56
3272984--3273039
29
2.0
28
89
3
85
42
10
3
42
1.56
3273035--3273072
18
2.0
20
90
10
62
63
2
13
21
1.42
3273896--3273946
16
3.2
16
73
13
52
49
1
0
49
1.12
3274306--3274456
61
2.5
61
82
2
169
39
9
5
45
1.62
3283176--3283201
9
2.9
9
100
0
52
46
7
0
46
1.31
3285569--3285782
88
2.4
87
76
11
220
40
16
8
34
1.79
3285884--3286008
9
13.6
9
72
14
85
66
1
2
29
1.14
3285921--3286008
19
4.6
19
81
1
95
64
1
1
32
1.08
3285885--3285978
8
10.6
8
73
22
55
67
2
2
28
1.14
3286193--3286259
19
3.4
20
82
10
84
29
7
1
61
1.32
3286234--3286305
28
2.5
30
78
15
80
29
6
1
62
1.30
3286251--3286301
9
5.6
9
79
9
50
31
3
0
64
1.11
3286192--3286313
19
6.3
19
68
11
70
27
6
0
64
1.23
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3286331--3286384
19
2.8
20
86
8
76
37
1
0
61
1.07
3286326--3286397
9
7.8
10
74
13
66
34
1
0
63
1.03
3304882--3304930
21
2.2
22
82
13
57
48
0
6
44
1.27
3318198--3318232
15
2.2
16
90
5
54
45
0
0
54
0.99
3343316--3343361
24
1.9
24
100
0
92
39
8
21
30
1.84
3347521--3348084
152
3.7
151
89
4
825
30
8
7
53
1.60
3348080--3348991
155
6.0
151
89
4
1269
52
7
8
30
1.60
3350269--3350349
32
2.5
33
82
11
105
30
16
7
45
1.74
3350955--3351082
63
2.0
63
96
0
238
45
12
11
30
1.78
3363470--3363545
24
3.1
24
77
9
75
31
21
28
18
1.97

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207