Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_D06
Parameters: 2 7 7 80 10 50 1000
Length:  62964862

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   

This is table  163  of  207  ( 24831 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50163681--50163735
25
2.2
25
93
0
92
34
20
29
16
1.94
50169439--50169497
30
2.0
29
90
3
91
32
20
5
42
1.74
50172267--50172319
23
2.3
23
100
0
106
32
3
39
24
1.73
50179003--50179083
25
3.2
25
79
6
92
25
20
27
25
1.99
50179003--50179109
50
2.2
49
84
1
142
29
20
24
25
1.99
50180922--50180951
12
2.5
12
94
0
51
80
0
0
20
0.72
50182251--50182284
16
2.1
16
94
0
59
38
0
5
55
1.24
50194570--50194671
50
2.1
49
92
1
168
46
12
9
31
1.75
50196674--50196716
18
2.6
16
85
7
59
62
0
2
34
1.08
50196674--50196716
17
2.6
15
82
17
50
62
0
2
34
1.08
50198298--50198328
9
3.4
9
90
0
53
25
12
22
38
1.90
50198382--50198418
9
4.1
9
92
0
65
45
13
10
29
1.77
50215303--50215358
25
2.2
25
90
6
87
42
10
26
19
1.84
50217632--50217681
22
2.2
24
80
20
63
52
4
0
44
1.20
50217668--50217717
18
2.7
19
81
6
57
60
2
2
36
1.20
50218123--50218227
11
9.4
11
69
21
67
58
0
2
39
1.13
50218113--50218244
40
3.4
39
87
7
187
61
0
2
36
1.09
50218190--50218256
16
4.2
17
75
11
61
61
0
0
38
0.96
50220522--50220565
23
1.9
23
85
0
61
27
6
11
54
1.61
50224143--50224743
297
2.0
297
87
3
852
35
12
16
35
1.87
50226912--50226961
20
2.5
19
80
6
55
38
2
8
52
1.43
50226912--50226963
19
2.7
19
82
8
52
38
1
7
51
1.42
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50246058--50246098
18
2.3
18
86
0
55
26
7
46
19
1.76
50246664--50246728
32
2.1
31
94
2
112
58
20
3
18
1.52
50248615--50248648
18
1.9
17
88
5
50
61
2
0
35
1.11
50251945--50251995
21
2.7
19
76
11
52
39
15
11
33
1.84
50252236--50252324
34
2.6
34
77
7
90
26
16
24
31
1.97
50254240--50254277
16
2.4
16
86
4
51
15
2
2
78
0.97
50260650--50260694
24
1.9
23
86
13
65
37
0
2
60
1.09
50260791--50260818
9
3.1
9
100
0
56
57
10
0
32
1.33
50260761--50260902
68
2.1
66
94
2
248
45
9
4
40
1.58
50260891--50260932
16
2.6
16
92
0
66
42
7
2
47
1.43
50260906--50260961
23
2.5
23
82
2
69
44
1
1
51
1.22
50260761--50260924
68
2.5
66
86
10
216
45
9
4
40
1.55
50266421--50266517
23
4.2
23
90
0
158
22
20
26
29
1.99
50266422--50266510
46
1.9
46
100
0
178
22
20
26
30
1.98
50270049--50270099
24
2.2
24
77
22
56
33
0
5
60
1.21
50270236--50270275
20
2.0
20
90
0
62
50
12
10
27
1.72
50270414--50270442
3
9.7
3
100
0
58
68
0
0
31
0.89
50270778--50270816
14
2.6
14
88
8
51
38
17
10
33
1.84
50276514--50276575
31
2.0
31
100
0
124
22
6
22
48
1.73
50278445--50278606
77
2.1
77
100
0
324
41
7
9
41
1.66
50278927--50279011
27
3.0
27
72
14
73
44
0
1
54
1.07
50279127--50279223
39
2.5
39
93
0
176
35
27
5
31
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50279142--50279270
39
3.0
44
85
8
153
37
27
5
30
1.79
50279250--50279302
16
3.3
15
81
5
52
22
26
7
43
1.80
50280677--50280730
16
3.4
16
97
0
99
35
7
31
25
1.84
50280662--50280730
32
2.2
32
86
5
95
36
7
31
24
1.83
50280710--50280799
45
2.0
44
82
6
110
28
5
28
36
1.80
50280962--50280996
18
2.0
17
88
5
52
54
0
0
45
0.99
50280942--50281414
120
4.0
120
92
2
751
50
4
1
43
1.30
50281196--50281349
16
9.1
16
67
19
64
55
2
0
41
1.18
50281290--50281351
26
2.4
26
81
5
72
56
0
0
43
0.99
50294107--50294153
5
8.6
5
90
9
58
17
2
0
80
0.80
50294107--50294154
6
8.5
6
88
11
59
16
2
0
81
0.79
50294145--50294198
21
2.5
22
77
14
60
18
11
0
70
1.16
50295948--50295993
16
2.7
18
80
10
60
17
0
8
73
1.07
50295925--50295996
6
12.5
6
73
8
51
12
4
6
76
1.13
50295978--50296045
26
2.6
26
77
13
77
19
8
4
67
1.35
50296962--50296999
15
2.6
15
83
4
51
71
5
2
21
1.19
50305812--50305941
7
18.8
6
81
13
64
29
0
6
63
1.20
50305816--50305878
20
2.9
21
75
20
67
23
0
4
71
1.05
50305812--50305928
14
8.3
14
87
8
100
27
0
7
64
1.20
50305867--50305927
21
2.9
20
95
4
95
29
0
11
59
1.33
50307093--50307121
8
3.6
8
100
0
58
65
0
0
34
0.93
50311875--50311974
48
2.1
48
100
0
200
32
2
44
22
1.64
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50313006--50313524
27
19.2
27
82
4
516
43
17
16
22
1.88
50313006--50313524
81
6.4
81
82
3
571
43
17
16
22
1.88
50313718--50313824
52
2.1
52
87
3
153
20
24
22
32
1.98
50313726--50313821
26
3.7
26
80
2
122
18
25
23
32
1.97
50313943--50314043
30
3.5
28
79
10
103
22
25
25
25
2.00
50317717--50317763
17
2.6
18
83
6
60
27
4
4
63
1.31
50320040--50320178
71
2.0
71
100
0
278
36
12
29
21
1.90
50321609--50321669
27
2.3
27
82
0
68
19
16
26
37
1.93
50321622--50321992
27
13.9
27
85
2
428
18
16
20
44
1.87
50321622--50322005
160
2.4
160
87
5
544
18
17
19
44
1.87
50328498--50328552
21
2.6
21
97
0
101
30
25
27
16
1.96
50335053--50335101
8
5.9
8
79
9
53
18
4
0
77
0.92
50336619--50336663
18
2.4
19
78
14
58
24
6
6
62
1.44
50341643--50341676
17
2.0
17
94
0
59
44
2
0
52
1.16
50344879--50344923
22
2.0
22
100
0
90
35
13
17
33
1.89
50346975--50347002
6
4.7
6
100
0
56
17
28
0
53
1.44
50377942--50377980
19
2.2
18
86
9
53
10
12
2
74
1.17
50383038--50383076
19
2.2
18
86
9
53
10
12
2
74
1.17
50395747--50395797
14
3.7
14
79
10
52
0
25
0
74
0.82
50395757--50395841
11
7.3
11
70
20
57
2
22
3
71
1.12
50395760--50395822
25
2.5
26
82
7
67
1
25
4
68
1.18
50396133--50396167
17
2.1
17
100
0
70
34
5
5
54
1.48
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50397987--50398013
12
2.2
12
100
0
54
74
0
0
25
0.83
50401768--50402322
277
2.0
277
98
0
1074
22
16
25
35
1.95
50403715--50403890
95
1.9
95
98
0
343
31
15
21
31
1.94
50405054--50405213
83
1.9
83
97
0
302
44
11
9
34
1.73
50405191--50405219
15
1.9
15
100
0
58
44
6
6
41
1.58
50408475--50408578
45
2.3
45
83
4
122
36
26
15
21
1.93
50415444--50415830
44
8.3
44
69
16
219
27
22
17
32
1.96
50415394--50415820
142
3.0
142
92
1
721
28
21
17
33
1.96
50426239--50426293
21
2.5
22
82
11
69
12
14
9
63
1.51
50433654--50433725
29
2.6
28
89
8
96
51
9
16
22
1.73
50433669--50433725
29
2.0
29
100
0
114
52
10
15
21
1.72
50448148--50448178
16
1.9
16
100
0
62
19
12
16
51
1.76
50457470--50457513
17
2.6
17
88
0
61
54
13
15
15
1.71
50457515--50457562
16
2.8
17
74
20
55
66
0
0
33
0.92
50457508--50457562
22
2.7
20
77
5
56
67
0
0
32
0.91
50457519--50457558
20
1.9
20
85
10
53
65
0
0
35
0.93
50458002--50458070
20
3.5
20
91
0
93
56
7
7
28
1.53
50461941--50461986
24
2.0
23
86
4
65
65
2
0
32
1.05
50462441--50462481
20
2.0
20
90
0
64
53
4
7
34
1.50
50463993--50464024
14
2.4
14
90
10
50
65
0
6
28
1.16
50463986--50464063
34
2.3
35
81
2
86
70
5
3
20
1.22
50464006--50464075
6
11.0
6
76
11
50
72
5
1
20
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50464491--50464517
10
2.7
10
100
0
54
14
40
0
44
1.46
50467274--50467350
14
5.0
15
71
20
52
42
15
9
32
1.78
50467290--50467329
20
2.0
20
90
0
62
50
12
10
27
1.72
50467278--50467344
34
1.9
35
90
3
109
46
13
8
31
1.74
50467313--50467352
14
2.9
14
84
0
53
42
17
7
32
1.77
50468985--50469035
16
3.1
17
83
11
61
41
0
0
58
0.98
50484517--50484603
24
3.6
25
73
14
74
36
18
26
18
1.94
50493194--50493323
66
2.0
66
84
0
170
33
22
20
23
1.97
50494285--50494325
17
2.5
17
88
4
57
46
9
17
26
1.79
50515858--50515901
11
3.9
11
82
5
52
2
25
0
72
0.96

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207