Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: D06
Parameters: 2 7 7 80 10 50 1000
Length:  68668488

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   

This is table  204  of  230  ( 27491 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60970912--60970960
18
2.8
18
79
14
66
34
8
0
57
1.29
60977228--60977272
23
2.0
22
82
4
54
35
2
0
62
1.08
60981238--60981266
14
2.1
14
100
0
58
44
6
20
27
1.77
60985727--60985764
6
6.3
6
100
0
76
15
0
47
36
1.46
60985889--60986109
94
2.4
89
81
11
243
41
4
17
37
1.69
60986142--60986559
126
3.3
126
90
1
640
32
18
20
28
1.96
60999706--60999924
55
4.0
55
84
2
253
50
12
7
29
1.67
60999706--60999933
108
2.1
110
83
1
289
50
12
7
29
1.67
61016865--61016899
12
3.2
11
88
11
54
8
25
2
62
1.38
61031372--61031423
15
3.3
15
81
13
52
61
9
5
23
1.48
61036533--61036574
15
2.8
15
85
7
50
66
2
0
30
1.04
61036529--61036569
18
2.4
18
84
11
52
63
0
0
36
0.95
61036791--61036831
20
2.0
22
85
9
59
70
4
9
14
1.30
61037024--61037099
21
3.7
21
91
7
129
36
13
10
39
1.79
61037303--61037387
44
1.9
44
90
4
136
29
24
17
28
1.97
61037385--61038311
132
7.0
132
93
0
1557
24
24
20
30
1.99
61045376--61045430
19
2.7
21
83
11
87
36
10
10
41
1.75
61045367--61045418
21
2.5
20
79
20
61
34
15
7
42
1.75
61045485--61045528
20
2.1
21
91
4
72
52
0
6
40
1.28
61058212--61058244
13
2.6
13
90
4
50
90
6
0
3
0.52
61061771--61061829
29
2.0
29
83
0
73
44
1
23
30
1.64
61062039--61062070
13
2.5
13
94
0
55
31
0
12
56
1.37
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61062165--61062406
50
4.7
50
86
4
297
26
24
29
19
1.99
61062165--61062414
100
2.4
103
88
6
364
26
24
29
20
1.99
61065048--61065077
15
2.0
15
93
0
51
43
0
0
56
0.99
61065073--61065100
12
2.3
12
100
0
56
42
0
0
57
0.99
61066707--61066752
21
2.2
21
81
14
60
63
4
2
30
1.26
61066739--61066778
17
2.3
18
87
8
57
67
0
7
25
1.16
61071520--61071558
17
2.4
16
83
8
53
64
5
0
30
1.15
61071575--61071624
16
3.2
16
78
16
59
70
0
2
28
0.99
61071807--61071856
26
2.0
25
84
4
64
38
2
2
58
1.21
61075696--61075733
20
2.0
20
89
5
60
52
7
5
34
1.53
61076280--61076383
31
3.3
31
70
12
104
36
12
9
41
1.76
61076313--61076408
31
3.0
32
69
14
90
34
17
12
35
1.88
61076279--61076408
63
2.1
63
94
0
224
34
15
11
38
1.83
61079002--61079069
29
2.4
27
79
15
75
33
2
7
55
1.42
61079353--61079387
15
2.3
15
100
0
70
40
5
11
42
1.65
61082913--61082976
28
2.4
28
86
5
87
43
0
0
56
0.99
61083032--61083065
17
2.0
17
100
0
68
41
0
0
58
0.98
61083212--61083317
44
2.5
41
79
18
135
35
31
3
29
1.75
61083229--61083319
46
2.0
46
93
4
159
38
30
4
26
1.76
61083299--61083335
16
2.3
16
90
0
56
21
29
5
43
1.75
61089528--61089568
17
2.5
16
88
4
55
34
2
0
63
1.08
61090198--61090444
42
5.8
42
84
2
280
27
20
19
32
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61090193--61090457
84
3.1
84
81
4
309
30
20
18
30
1.97
61090828--61090878
21
2.4
21
90
0
75
1
45
19
33
1.62
61102719--61102801
27
3.1
27
94
0
148
32
0
14
53
1.42
61102719--61102792
9
8.2
9
84
0
94
32
0
16
51
1.45
61103009--61103321
16
19.7
15
66
23
85
37
3
12
46
1.59
61102994--61103400
93
4.5
92
88
7
625
37
3
12
46
1.59
61103097--61103152
9
6.8
9
73
19
59
35
0
16
48
1.46
61103097--61103238
40
3.4
40
70
17
128
36
2
14
47
1.56
61103167--61103400
43
5.0
50
70
18
187
38
3
12
45
1.59
61103206--61103331
24
5.4
24
63
28
74
36
3
13
46
1.59
61102994--61103400
178
2.2
184
94
3
718
37
3
12
46
1.59
61103222--61103384
53
3.3
51
68
24
143
37
3
11
47
1.58
61103275--61103330
9
6.8
9
73
19
50
37
0
14
48
1.44
61105294--61105327
15
2.3
15
89
0
50
55
35
0
8
1.31
61106114--61106489
206
1.8
205
86
3
540
25
21
20
32
1.97
61106300--61106937
230
2.8
226
82
5
703
25
21
22
31
1.98
61112861--61113292
164
2.6
164
82
7
482
31
29
12
26
1.93
61114495--61114551
18
3.0
20
75
17
59
57
1
5
35
1.31
61117153--61117186
13
2.7
13
86
4
52
38
5
14
41
1.70
61118035--61118090
27
2.1
26
83
9
69
42
0
5
51
1.24
61122683--61122964
47
5.7
47
72
12
231
39
17
7
36
1.78
61122634--61123019
157
2.5
155
94
1
666
39
16
7
37
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61139856--61139960
43
2.5
43
79
3
124
31
20
20
26
1.98
61146087--61146124
20
1.9
20
84
10
51
42
5
13
39
1.66
61148536--61148593
31
1.9
31
92
3
100
34
12
10
43
1.76
61154808--61154838
16
1.9
16
93
0
53
51
0
22
25
1.48
61157931--61157998
19
3.4
19
78
13
75
51
0
1
47
1.09
61168477--61168525
21
2.4
22
86
10
68
55
0
0
44
0.99
61168443--61168540
37
2.6
37
79
10
94
57
3
1
38
1.21
61174406--61174455
21
2.5
20
86
3
64
54
2
2
42
1.23
61175241--61175272
16
2.0
16
93
0
55
84
0
15
0
0.63
61177960--61177993
16
2.2
16
89
5
52
64
2
0
32
1.08
61178413--61178450
20
1.9
20
84
10
51
42
0
0
57
0.98
61183574--61184105
266
2.0
266
98
0
1028
33
18
25
22
1.97
61189065--61189990
44
21.2
44
76
7
827
27
16
25
30
1.97
61189063--61189990
132
7.1
132
93
2
1552
28
16
25
29
1.96
61189067--61189990
387
2.4
389
93
3
1552
27
16
25
30
1.97
61190148--61190420
50
5.5
50
70
5
187
30
22
21
25
1.99
61190146--61190438
100
3.0
97
80
8
376
30
22
21
25
1.99
61190447--61190762
40
7.8
40
80
9
361
31
25
20
22
1.98
61190430--61190763
82
4.1
82
93
1
555
32
25
20
21
1.97
61198744--61198787
24
1.9
24
90
9
74
36
0
2
61
1.09
61198854--61199023
59
2.9
59
98
0
322
44
9
5
40
1.59
61199034--61199075
16
2.6
16
92
0
66
42
7
2
47
1.43
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61199113--61199142
15
1.9
16
93
6
53
0
33
60
6
1.23
61200184--61200218
15
2.3
15
90
5
52
40
0
8
51
1.33
61200191--61200222
15
2.1
15
100
0
64
31
0
6
62
1.20
61201676--61201871
106
1.8
106
84
2
268
30
5
25
38
1.79
61202687--61202743
29
1.9
30
86
10
82
40
7
15
36
1.75
61204247--61204506
24
11.3
22
69
19
122
44
21
8
25
1.81
61204218--61204506
69
4.2
69
92
0
481
44
20
9
25
1.81
61204351--61204449
22
4.4
22
74
5
90
43
20
13
23
1.86
61204218--61204506
137
2.1
138
92
0
481
44
20
9
25
1.81
61205275--61205427
41
3.7
41
85
0
198
33
26
21
18
1.96
61207917--61207989
32
2.5
27
76
19
83
26
2
17
53
1.57
61207930--61207990
32
1.9
32
93
0
104
27
3
16
52
1.59
61209222--61209259
20
1.9
20
94
0
67
44
0
2
52
1.14
61209342--61209379
19
2.0
19
100
0
76
47
15
10
26
1.78
61210821--61210866
19
2.5
18
82
3
56
36
8
8
45
1.66
61212927--61212963
11
3.2
12
85
14
51
70
0
0
29
0.88
61213011--61213259
133
1.8
135
83
5
333
50
8
13
27
1.70
61215687--61215736
12
4.2
12
87
5
50
14
48
6
32
1.67
61215697--61215736
6
6.7
6
94
0
71
15
50
2
32
1.57
61217421--61217467
4
11.8
4
82
8
60
48
25
2
23
1.62
61219425--61219578
45
3.5
44
78
3
150
36
22
14
27
1.92
61220611--61220644
14
2.3
15
90
5
52
5
11
0
82
0.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61220609--61220651
12
3.2
13
78
15
52
6
16
0
76
0.99
61229356--61229430
27
2.8
28
78
15
79
60
1
5
33
1.28
61229389--61229550
9
16.7
9
68
17
67
58
4
2
34
1.31
61229389--61229550
29
5.5
29
70
17
84
58
4
2
34
1.31
61229496--61229553
19
3.1
19
80
7
73
60
3
1
34
1.24
61238899--61238991
46
2.0
46
91
0
150
13
34
11
39
1.82
61242566--61242612
19
2.5
19
80
13
53
74
8
4
12
1.19
61243062--61243095
14
2.4
14
90
9
52
64
0
2
32
1.08
61245588--61245622
17
1.9
19
88
11
56
62
0
0
37
0.95
61247067--61247102
18
2.0
18
88
0
54
36
8
27
27
1.86

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230