Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: D06
Parameters: 2 7 7 80 10 50 1000
Length:  68668488

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   

This is table  218  of  230  ( 27491 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64750421--64750445
12
2.1
12
100
0
50
60
16
8
16
1.58
64752358--64752386
14
2.0
15
93
6
51
0
44
0
55
0.99
64753350--64753378
14
2.0
15
93
6
51
55
0
44
0
0.99
64758152--64758189
20
1.9
20
89
10
60
63
0
13
23
1.30
64758273--64758299
12
2.2
12
100
0
54
48
11
14
25
1.77
64763126--64763176
15
3.3
15
74
17
50
33
1
0
64
1.05
64763489--64763535
15
2.9
16
81
9
60
74
4
0
21
0.99
64766528--64766564
19
2.0
18
89
5
56
0
16
2
81
0.81
64772614--64772923
129
2.4
129
87
5
423
30
14
16
37
1.89
64775156--64775206
25
2.0
25
85
7
68
60
0
1
37
1.08
64777001--64777040
21
1.9
21
94
0
71
57
15
7
20
1.61
64785178--64785247
9
7.8
9
96
0
113
38
28
10
22
1.87
64785768--64785799
5
6.2
5
96
3
55
18
3
0
78
0.89
64785990--64786064
30
2.6
29
77
6
82
36
2
8
53
1.45
64791944--64791982
16
2.4
17
83
16
55
58
5
0
35
1.20
64792103--64792148
17
3.0
16
79
14
53
30
0
2
67
1.03
64794940--64795031
33
2.7
33
77
9
87
28
22
15
33
1.94
64798082--64798112
16
1.9
16
93
0
53
25
16
25
32
1.96
64800314--64800504
104
1.8
103
83
3
249
41
14
13
30
1.84
64803401--64803500
40
2.6
38
82
7
112
59
7
0
34
1.25
64803429--64803518
38
2.2
41
90
7
141
52
5
0
42
1.25
64803617--64803658
6
7.0
6
100
0
84
66
0
0
33
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64821104--64821233
42
3.1
42
100
0
260
11
11
53
23
1.70
64821620--64822685
132
8.1
132
94
0
1817
29
26
16
27
1.97
64823586--64823610
1
25.0
1
100
0
50
0
0
0
100
0.00
64835993--64836106
42
2.7
42
89
6
142
10
12
54
22
1.68
64836019--64836106
42
2.1
42
100
0
176
11
11
53
23
1.69
64837297--64837330
3
11.3
3
100
0
68
67
0
0
32
0.91
64838898--64839539
44
14.8
43
71
11
357
28
21
19
30
1.98
64838863--64839583
175
4.1
175
93
0
1200
28
21
20
30
1.98
64839126--64839367
131
1.9
129
79
6
274
29
20
21
28
1.98
64840601--64840647
21
2.2
21
84
0
58
25
36
10
27
1.89
64840730--64840771
15
3.0
14
83
10
50
11
16
0
71
1.14
64841629--64841656
11
2.5
11
100
0
56
0
0
7
92
0.37
64845456--64845557
3
34.0
3
91
0
168
62
2
0
33
1.17
64847228--64847550
175
1.8
175
88
2
497
29
21
18
30
1.97
64847469--64848200
44
16.8
43
69
12
293
29
21
18
30
1.97
64847299--64847802
85
5.8
86
70
12
280
28
22
18
30
1.97
64847390--64847679
129
2.2
129
88
2
422
29
21
17
31
1.96
64847524--64848029
175
2.9
175
94
0
859
30
21
18
30
1.97
64847127--64848158
304
3.4
303
84
5
1144
29
21
17
30
1.97
64847642--64847935
87
3.4
86
73
9
299
29
21
19
29
1.97
64847227--64848245
479
2.1
479
91
1
1612
29
21
18
30
1.97
64847874--64848158
129
2.2
129
90
0
435
29
21
18
30
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64848246--64848477
87
2.7
87
84
2
277
26
25
18
29
1.98
64849636--64849682
21
2.2
21
88
0
67
25
38
10
25
1.88
64849774--64849816
9
4.6
9
83
11
59
13
9
0
76
1.01
64849777--64849815
20
2.0
20
94
0
69
15
10
0
74
1.07
64851518--64851566
18
2.7
18
81
9
64
81
4
2
12
0.91
64851581--64851614
7
5.1
7
92
7
54
85
0
14
0
0.60
64851578--64851614
19
2.0
18
94
5
65
86
0
13
0
0.57
64852412--64852455
9
4.4
10
81
18
56
79
0
9
11
0.93
64852413--64852452
21
1.9
21
94
0
71
77
0
10
12
0.99
64853752--64853983
87
2.7
87
86
2
304
29
19
25
25
1.99
64854079--64854275
44
4.5
44
73
11
138
29
18
22
28
1.97
64854071--64854355
129
2.2
129
92
0
471
29
18
21
29
1.97
64853975--64854896
304
3.0
302
84
5
1085
30
18
21
28
1.97
64854200--64854705
175
2.9
175
94
0
868
30
18
21
29
1.97
64854550--64854843
129
2.3
129
91
1
464
30
18
21
29
1.97
64854602--64854934
85
3.9
85
71
11
232
30
19
21
28
1.98
64854679--64855011
175
1.9
175
90
2
535
29
19
22
29
1.98
64853984--64855011
479
2.1
478
92
0
1662
30
18
21
29
1.97
64854071--64855071
304
3.3
303
84
4
1121
30
18
21
29
1.97
64856644--64856705
3
20.3
3
80
3
70
32
6
3
58
1.40
64856864--64856892
6
4.8
6
100
0
58
34
13
0
51
1.42
64856864--64856904
18
2.3
18
87
8
57
39
12
0
48
1.41
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64856912--64856952
20
2.0
20
85
0
55
36
0
7
56
1.27
64860271--64860312
22
1.9
22
85
0
57
47
2
2
47
1.28
64876048--64876114
3
22.3
3
74
17
50
62
1
5
29
1.28
64876048--64876103
15
3.5
15
78
7
58
62
0
7
30
1.22
64876046--64876135
12
7.6
11
75
18
60
60
2
5
32
1.32
64876043--64876114
15
4.9
14
74
14
56
61
2
5
30
1.33
64882051--64882106
6
9.8
6
81
11
57
19
3
0
76
0.93
64882053--64882106
12
4.8
11
84
11
65
18
3
0
77
0.91
64882060--64882113
27
1.9
29
85
7
76
20
5
0
74
1.02
64883123--64883158
18
1.9
18
94
5
63
88
2
8
0
0.59
64887365--64887458
42
2.2
42
79
3
109
40
19
25
14
1.90
64887972--64888021
22
2.5
20
84
15
61
42
10
0
48
1.37
64889978--64890005
11
2.5
11
100
0
56
28
0
0
71
0.86
64891764--64891934
10
17.4
10
66
12
77
61
4
2
32
1.27
64891751--64891893
19
7.5
19
71
20
86
60
3
2
33
1.25
64891775--64891828
28
2.0
27
85
10
74
66
3
1
27
1.19
64891800--64891884
31
2.8
31
80
8
86
60
4
2
32
1.30
64891753--64891934
9
18.7
9
68
16
71
61
3
2
31
1.28
64891753--64891934
20
9.3
19
69
15
95
61
3
2
31
1.28
64891840--64891941
19
5.1
20
68
15
59
60
5
2
30
1.35
64892449--64892473
10
2.5
10
100
0
50
40
0
0
60
0.97
64892460--64892528
19
3.9
17
74
20
54
30
0
4
65
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64892488--64892586
9
10.6
9
70
15
51
28
1
4
66
1.16
64892496--64892548
19
2.7
19
85
8
63
33
1
3
60
1.26
64892487--64892540
27
2.0
27
85
7
74
31
0
5
62
1.18
64892471--64892586
19
6.2
19
68
16
55
27
0
5
66
1.19
64896922--64896980
31
1.9
30
82
6
73
45
10
10
33
1.72
64900237--64900271
18
1.9
18
88
0
52
42
0
0
57
0.99
64900236--64900274
19
2.0
19
85
5
51
43
0
0
56
0.99
64900303--64900347
20
2.2
21
88
11
67
28
0
6
64
1.19
64905636--64905693
29
2.0
29
89
0
89
39
20
18
20
1.92
64907268--64907303
15
2.5
14
86
8
54
44
8
0
47
1.33
64908736--64908777
19
2.2
19
83
8
50
38
4
0
57
1.20
64916340--64916456
57
2.0
58
83
4
148
42
5
23
28
1.77
64924761--64924952
41
4.7
41
91
2
314
31
20
25
23
1.98
64924926--64924975
26
1.9
26
92
8
84
20
22
32
26
1.98
64924885--64925015
67
1.9
68
84
7
178
25
18
27
29
1.98
64924955--64925098
42
3.4
41
78
10
139
23
15
25
35
1.94
64924952--64925098
43
3.5
41
78
10
127
23
14
26
34
1.94
64929746--64929794
24
2.1
23
81
7
55
59
0
0
40
0.98
64930578--64930620
18
2.4
18
80
7
52
51
0
2
46
1.13
64935611--64935669
29
2.0
29
100
0
118
23
27
20
28
1.99
64945163--64945209
23
2.0
24
84
12
62
10
14
0
74
1.07
64945917--64945960
5
8.8
5
100
0
88
38
0
0
61
0.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64949073--64949112
16
2.5
16
88
8
55
37
7
2
52
1.43
64949073--64949135
18
3.6
17
78
4
56
36
9
3
50
1.51
64953980--64954057
10
8.1
9
73
16
50
80
2
12
3
0.95
64954008--64954058
11
4.5
11
78
7
57
80
0
13
5
0.89
64953980--64954032
20
2.7
20
80
11
65
83
3
13
0
0.79
64953982--64954051
31
2.3
31
80
12
81
80
2
14
2
0.95
64954384--64954582
108
1.9
106
84
4
265
24
18
10
46
1.81
64955480--64956261
46
16.6
46
82
5
911
26
15
24
33
1.95
64955757--64955789
17
1.9
17
100
0
66
18
27
12
42
1.85
64955709--64955832
63
2.0
63
86
0
176
25
18
20
34
1.96

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230