Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: D10
Parameters: 2 7 7 80 10 50 1000
Length:  67973905

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   

This is table  228  of  228  ( 27298 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67799259--67799323
26
2.6
25
73
22
64
49
3
10
36
1.53
67801823--67801858
18
1.9
20
88
11
58
47
2
16
33
1.61
67801821--67801864
20
2.3
19
81
18
56
50
2
13
34
1.55
67802207--67802244
18
2.1
19
85
5
51
57
7
7
26
1.54
67803904--67803953
23
2.2
23
100
0
100
46
4
4
46
1.40
67804224--67804273
21
2.4
20
83
9
64
32
32
10
26
1.89
67807894--67807929
3
12.0
3
100
0
72
33
0
0
66
0.92
67815749--67815804
27
2.1
27
89
0
85
46
1
14
37
1.55
67826887--67826944
27
2.1
27
84
6
73
36
5
5
53
1.46
67827613--67827948
173
1.9
174
84
4
446
36
21
11
30
1.88
67830408--67830653
46
5.4
46
94
0
424
32
15
23
28
1.95
67831380--67831430
18
2.8
17
77
13
57
64
1
1
31
1.15
67833313--67833404
3
31.7
3
68
18
52
58
3
4
33
1.34
67833538--67833572
16
2.2
16
90
5
54
77
2
0
20
0.90
67843646--67843684
20
2.0
19
85
5
51
53
5
7
33
1.51
67844263--67844327
32
2.0
32
100
0
130
21
9
24
44
1.81
67847482--67847509
14
2.0
14
100
0
56
35
7
21
35
1.81
67847542--67847599
29
2.0
29
100
0
116
31
3
20
44
1.68
67848747--67848793
21
2.2
21
81
7
60
36
0
2
61
1.08
67849925--67849965
14
2.7
15
85
14
57
70
0
0
29
0.87
67858610--67858653
24
1.9
23
90
9
72
47
0
0
52
1.00
67858606--67858659
24
2.4
22
81
12
65
48
1
0
50
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67858672--67858714
23
2.0
23
86
9
63
48
0
4
46
1.22
67861560--67861640
31
2.5
31
84
4
99
28
18
12
40
1.87
67864935--67864975
16
2.4
16
84
8
55
39
4
0
56
1.21
67867773--67867817
21
2.1
21
95
0
81
28
17
28
24
1.97
67871986--67872129
69
2.1
69
85
2
191
47
12
9
30
1.72
67878127--67878540
108
3.9
108
78
9
422
36
14
17
31
1.90
67878130--67878540
111
3.8
106
79
10
419
36
14
17
31
1.90
67878631--67878656
13
2.0
13
100
0
52
0
15
0
84
0.62
67879113--67879170
20
3.3
18
74
23
52
32
3
0
63
1.11
67879275--67879344
31
2.3
31
85
2
88
54
5
8
31
1.54
67880983--67881038
22
2.5
21
82
11
58
25
8
3
62
1.41
67886643--67886685
23
2.0
23
86
9
63
48
4
9
37
1.56
67887591--67887630
21
2.0
20
85
5
53
62
2
0
35
1.09
67892454--67892518
30
2.2
30
91
0
103
50
10
9
29
1.68
67901072--67901143
19
3.8
20
72
17
64
65
2
0
31
1.07
67901782--67901904
9
13.0
9
69
18
63
34
2
5
57
1.35
67901845--67901895
22
2.5
22
84
9
72
35
0
7
56
1.28
67901829--67901908
40
2.1
38
83
9
99
30
0
8
61
1.26
67909169--67909234
33
2.0
33
82
11
82
46
1
1
50
1.20
67912998--67913055
10
6.0
10
73
13
50
63
1
0
34
1.04
67913001--67913061
28
2.1
29
90
3
97
68
1
1
27
1.08
67913404--67913444
22
1.9
22
85
14
59
19
4
4
70
1.24
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67913398--67913484
33
2.6
34
82
10
92
20
3
3
72
1.14
67913414--67913466
18
3.2
16
75
12
54
20
3
3
71
1.17
67916397--67916494
42
2.3
42
94
0
169
46
15
13
24
1.81
67918711--67918967
128
2.0
128
98
0
496
33
15
17
33
1.92
67927319--67927423
50
2.1
51
98
1
203
19
9
27
43
1.81
67936147--67936175
14
2.0
15
93
6
51
79
6
13
0
0.93
67954668--67954800
67
2.0
67
100
0
266
35
3
6
55
1.40
67964065--67964095
2
15.5
2
100
0
62
48
51
0
0
1.00
67970331--67970377
15
3.1
15
90
0
58
55
0
10
34
1.35
67970345--67970403
12
4.8
12
81
4
64
61
0
8
30
1.26
67971709--67971949
87
2.7
87
85
3
304
24
20
23
31
1.98
67971735--67972289
44
12.8
45
70
14
332
25
21
20
32
1.98
67971872--67972293
170
2.5
170
99
0
826
26
20
20
32
1.97
67971969--67972245
83
3.3
83
71
14
278
27
20
19
32
1.97

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228

The End!