Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr07 97507971 
Parameters: 2 7 7 80 10 50 1000
Length:  97507971

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   

This is table  109  of  328  ( 39316 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30635519--30635566
23
2.0
25
84
8
64
25
16
0
58
1.38
30636770--30636800
15
2.1
15
94
5
55
41
0
0
58
0.98
30636768--30636861
49
1.9
49
82
4
118
34
3
2
60
1.24
30637624--30637658
17
2.1
17
100
0
70
28
54
0
17
1.43
30637676--30637701
13
2.0
13
100
0
52
38
46
0
15
1.46
30638231--30638272
21
2.0
22
86
13
61
35
0
0
64
0.94
30638481--30638516
2
18.0
2
100
0
72
50
0
0
50
1.00
30645063--30645189
64
2.0
64
92
0
209
29
18
16
36
1.92
30645389--30645877
178
2.8
177
88
1
730
30
19
21
28
1.98
30645746--30646145
134
3.0
134
89
0
604
29
18
21
31
1.96
30646010--30646339
177
1.9
178
87
1
493
30
19
20
30
1.97
30646010--30646389
177
2.1
178
85
4
491
30
18
21
30
1.97
30647113--30647170
14
3.9
14
73
10
53
15
5
6
72
1.24
30647182--30647224
22
2.0
22
86
9
61
34
0
0
65
0.93
30647949--30648385
129
3.4
127
83
6
510
27
16
18
37
1.92
30647949--30648385
125
3.4
125
84
5
502
27
16
18
37
1.92
30649624--30649648
12
2.1
12
100
0
50
52
8
0
40
1.31
30655952--30655999
21
2.3
21
85
0
60
66
10
0
22
1.22
30657458--30657488
13
2.5
13
94
5
55
41
0
0
58
0.98
30667151--30667183
14
2.4
14
95
5
59
42
0
0
57
0.98
30668175--30668214
20
2.0
20
100
0
80
35
5
30
30
1.79
30675281--30675323
19
2.3
19
87
0
59
34
0
2
62
1.08
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30678341--30678467
40
3.2
39
76
8
121
22
29
24
23
1.99
30678357--30678507
40
3.8
40
77
6
137
23
26
23
26
2.00
30678357--30678506
80
1.9
80
83
8
198
22
26
24
26
2.00
30686355--30686481
40
3.2
39
76
8
130
22
28
24
24
2.00
30693543--30693577
17
2.1
16
89
5
52
25
0
2
71
1.00
30696077--30696116
21
2.0
21
90
5
64
10
35
27
27
1.89
30698066--30698096
16
1.9
16
93
0
53
70
9
9
9
1.33
30700515--30700703
50
3.8
49
85
1
243
25
17
26
29
1.98
30706249--30706309
29
2.1
29
90
3
97
26
14
31
27
1.95
30706261--30706395
29
4.7
29
73
13
93
27
13
33
25
1.93
30710690--30710808
50
2.5
47
82
14
131
30
16
28
24
1.97
30711865--30711899
13
2.7
13
95
0
61
25
31
37
5
1.80
30719671--30719934
93
2.8
93
94
0
465
29
28
20
21
1.98
30719717--30719879
47
3.5
47
73
14
183
30
29
19
20
1.97
30719663--30719931
46
5.8
47
73
14
263
30
28
19
21
1.98
30722337--30722372
16
2.2
16
90
0
54
86
0
11
2
0.68
30730594--30730626
3
11.0
3
93
0
57
66
3
0
30
1.06
30731225--30731275
22
2.3
22
87
12
70
54
0
5
39
1.24
30743148--30743182
16
2.1
17
89
5
54
45
0
11
42
1.40
30757721--30757951
120
1.9
120
81
5
279
22
28
16
32
1.96
30757721--30757951
40
5.8
40
84
3
234
22
28
16
32
1.96
30757757--30757980
80
2.8
81
81
7
226
22
27
16
33
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30757721--30757979
40
6.5
39
81
7
159
23
27
16
32
1.96
30759801--30759976
46
3.8
46
79
12
216
20
21
29
28
1.98
30759798--30759969
93
1.8
93
96
0
317
20
21
29
27
1.98
30767361--30767536
46
3.8
46
79
12
216
20
21
29
28
1.98
30767358--30767529
93
1.8
93
96
0
317
20
21
29
27
1.98
30768591--30768986
199
2.0
197
97
1
756
38
12
18
30
1.88
30771374--30771549
46
3.8
46
79
12
216
20
21
29
28
1.98
30771371--30771542
93
1.8
93
96
0
317
20
21
29
27
1.98
30778897--30779072
46
3.8
46
79
12
216
20
21
29
28
1.98
30778894--30779065
93
1.8
93
96
0
317
20
21
29
27
1.98
30783129--30783198
27
2.5
28
93
2
115
27
14
28
30
1.95
30783129--30783210
27
3.0
27
84
8
69
28
15
25
30
1.96
30787786--30787825
17
2.4
17
91
0
62
27
30
20
22
1.98
30800708--30800742
18
1.9
18
88
0
52
74
2
5
17
1.14
30802243--30802520
133
2.1
133
86
1
396
26
21
21
29
1.99
30802451--30802571
44
2.7
43
73
7
118
27
23
19
29
1.98
30802243--30802569
133
2.5
133
81
3
309
27
21
21
29
1.98
30802396--30803192
177
4.5
177
86
0
995
27
21
19
31
1.97
30802693--30802967
88
3.1
88
69
13
256
30
21
20
28
1.98
30803272--30803320
23
2.1
23
81
11
55
44
14
14
26
1.83
30805849--30805903
19
2.9
18
78
7
65
63
5
12
18
1.47
30806956--30806980
9
2.8
9
100
0
50
88
0
0
12
0.53
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30807646--30807760
44
2.6
44
85
2
149
35
13
22
27
1.92
30807646--30807779
46
3.0
45
82
4
153
35
14
23
26
1.93
30812428--30812458
2
15.5
2
100
0
62
51
0
0
48
1.00
30814824--30814871
23
2.1
22
88
3
69
18
2
6
72
1.15
30818708--30818789
35
2.4
34
85
6
103
10
18
32
37
1.86
30828720--30828789
27
2.5
28
86
2
97
32
25
14
27
1.94
30831363--30831402
11
3.9
11
75
18
50
60
2
0
37
1.11
30838754--30838802
24
2.1
24
85
7
66
44
6
4
44
1.47
30842975--30843016
18
2.3
19
87
4
59
73
0
21
4
1.01
30850396--30850429
17
1.9
18
94
5
61
44
17
5
32
1.73
30854144--30854182
21
2.0
20
90
10
62
46
25
10
17
1.80
30859757--30859841
30
2.8
30
89
3
118
42
25
20
11
1.86
30864644--30864703
29
2.1
29
100
0
120
38
15
23
23
1.92
30865103--30865140
4
9.5
4
88
0
58
26
0
71
2
1.00
30874473--30874644
93
1.8
93
96
0
317
27
29
21
20
1.98
30874466--30874641
46
3.8
46
79
12
216
28
29
21
20
1.98
30882046--30882217
93
1.8
93
96
0
317
27
29
21
20
1.98
30882039--30882214
46
3.8
46
79
12
216
28
29
21
20
1.98
30883576--30883601
2
13.0
2
100
0
52
50
0
0
50
1.00
30886271--30886380
40
2.8
40
84
0
139
23
25
23
27
2.00
30894332--30894441
40
2.8
40
84
0
139
23
25
23
27
2.00
30901795--30901953
43
3.7
43
79
6
169
27
16
24
31
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30901794--30901912
44
2.8
41
82
8
157
24
16
26
31
1.96
30906407--30906509
27
3.8
27
94
0
170
32
21
7
38
1.82
30906387--30906509
54
2.3
54
87
2
176
31
20
8
39
1.83
30906407--30906620
27
7.9
27
81
6
148
35
21
8
35
1.83
30906488--30906620
28
4.9
27
79
5
133
38
21
8
31
1.83
30906488--30906621
55
2.4
54
78
6
144
38
21
8
31
1.84
30906605--30906681
27
2.9
27
90
0
109
31
14
9
45
1.76
30906721--30906864
27
5.3
27
78
6
139
41
20
7
29
1.80
30906688--30906820
54
2.5
53
77
8
126
40
21
9
28
1.85
30906658--30906853
81
2.4
81
74
10
195
39
19
9
31
1.83
30907676--30907722
20
2.3
20
100
0
94
40
10
19
29
1.85
30907772--30907907
52
2.7
51
93
5
224
27
21
23
27
1.99
30907772--30907907
26
5.3
26
88
3
190
27
21
23
27
1.99
30908040--30908133
42
2.2
42
92
0
152
30
13
19
36
1.91
30908155--30908264
31
3.5
31
94
0
193
30
18
24
26
1.98
30910527--30910781
27
9.4
27
79
5
174
32
22
8
37
1.84
30910530--30910781
54
4.7
53
76
6
218
32
22
8
37
1.84
30910581--30910791
109
2.0
107
83
1
269
33
21
8
36
1.84
30910813--30910963
27
5.6
27
74
10
121
41
21
7
29
1.82
30910833--30910963
54
2.4
54
83
2
147
40
19
8
31
1.82
30910813--30910964
81
1.9
81
80
10
177
40
21
7
29
1.82
30911750--30911836
20
4.3
20
89
2
131
40
10
19
29
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30911886--30912020
26
5.3
26
83
5
163
28
21
22
27
1.99
30911886--30912015
52
2.6
50
90
6
194
29
21
21
27
1.99
30912153--30912244
42
2.2
42
88
0
130
30
13
20
35
1.91
30912268--30912377
31
3.5
31
93
0
193
30
17
25
27
1.97
30913935--30914025
23
4.0
24
75
17
86
21
18
23
36
1.95
30916013--30916046
18
1.9
17
88
5
50
26
5
23
44
1.76
30922401--30922455
27
2.0
27
85
0
74
29
14
34
21
1.93
30933132--30933286
39
3.9
40
91
0
224
25
32
20
21
1.98
30933132--30933286
79
2.0
79
87
2
222
25
32
20
21
1.98
30951031--30951068
16
2.6
14
88
12
58
42
0
0
57
0.98

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328