Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr07 97507971 
Parameters: 2 7 7 80 10 50 1000
Length:  97507971

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   

This is table  138  of  328  ( 39316 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40166972--40167019
20
2.4
20
92
0
87
29
14
25
31
1.95
40195327--40195390
32
2.0
32
96
0
119
45
6
17
31
1.73
40199535--40199596
27
2.3
27
82
0
79
35
9
25
29
1.88
40200863--40200968
3
35.0
3
87
7
126
62
0
4
32
1.22
40200888--40201002
24
4.7
23
74
11
81
58
1
3
36
1.26
40203615--40203652
20
1.9
20
94
0
67
47
5
0
47
1.24
40204896--40204950
19
2.8
19
75
5
56
49
3
1
45
1.30
40207058--40207175
51
2.3
51
86
2
157
31
15
24
28
1.95
40207146--40207198
14
3.6
14
80
14
54
35
9
28
26
1.87
40207151--40207183
7
4.7
7
85
14
50
39
12
30
18
1.87
40208604--40208648
23
2.0
23
86
8
65
40
0
15
44
1.47
40210868--40210925
28
2.1
28
100
0
116
31
10
10
48
1.71
40220231--40220260
2
15.0
2
92
0
51
46
0
0
53
1.00
40224001--40224088
44
2.0
44
88
0
131
48
9
12
29
1.71
40224567--40224626
30
2.0
31
83
9
79
35
3
6
55
1.43
40225201--40225288
19
4.7
18
73
19
65
59
2
2
36
1.23
40225201--40225288
16
5.8
16
67
15
53
59
2
2
36
1.23
40227400--40227445
23
2.0
23
83
4
58
43
2
0
54
1.12
40228245--40228292
22
2.1
23
88
7
71
52
0
4
43
1.20
40229630--40229669
21
2.0
20
85
5
53
22
25
37
15
1.93
40230837--40231161
96
3.4
95
81
2
346
22
29
20
27
1.98
40230838--40231170
144
2.3
144
84
4
431
22
29
20
27
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40230838--40231170
48
6.9
48
79
4
314
22
29
20
27
1.98
40241657--40241818
7
22.3
7
84
5
189
49
36
0
14
1.43
40241657--40241818
37
4.5
35
83
6
207
49
36
0
14
1.43
40243599--40243874
137
2.0
137
97
0
516
31
24
19
25
1.98
40245661--40245744
26
3.2
25
91
6
132
36
23
4
34
1.76
40247141--40247311
43
4.0
43
78
8
186
32
25
16
25
1.96
40247141--40247303
86
1.9
85
83
8
215
32
24
17
25
1.97
40253710--40253752
23
1.9
22
85
4
59
48
27
4
18
1.68
40255351--40255520
43
4.0
43
79
9
186
33
24
17
24
1.96
40255356--40255512
86
1.8
85
85
6
219
32
23
18
25
1.97
40255850--40255920
34
2.1
34
100
0
142
36
21
11
30
1.88
40257900--40257936
18
2.1
18
94
0
65
51
5
10
32
1.60
40265274--40265307
17
1.9
18
94
5
61
14
47
26
11
1.79
40268229--40268268
21
1.9
21
90
10
64
20
25
45
10
1.81
40269410--40269524
46
2.5
44
87
6
160
24
28
18
28
1.98
40272707--40272930
40
5.6
40
84
3
270
24
23
26
25
2.00
40272711--40272930
83
2.7
79
85
6
264
24
24
27
24
2.00
40280822--40281044
40
5.5
40
82
5
252
25
22
25
26
2.00
40295815--40295871
22
2.6
22
83
2
62
35
28
22
14
1.93
40296188--40296214
12
2.2
12
100
0
54
37
25
18
18
1.94
40300442--40300475
17
2.0
17
100
0
68
23
0
5
70
1.09
40301640--40301713
21
3.5
21
73
0
67
17
17
17
47
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40301637--40301757
42
2.9
42
81
2
109
19
22
16
42
1.89
40301705--40301762
21
2.8
21
76
5
55
20
29
12
37
1.89
40303945--40304300
177
2.0
177
97
0
676
39
16
14
29
1.88
40306708--40306943
96
2.5
95
83
6
280
25
27
19
27
1.99
40306708--40306930
48
4.7
47
80
7
218
25
27
19
27
1.99
40307305--40307361
25
2.3
25
93
0
96
24
22
15
36
1.94
40311118--40311190
37
2.0
37
100
0
146
10
8
13
67
1.42
40313095--40313281
39
4.7
40
80
6
211
26
28
20
24
1.99
40313095--40313277
79
2.3
78
83
5
217
26
28
21
23
1.99
40314604--40314775
93
1.8
93
93
0
299
27
29
22
21
1.99
40314597--40314772
46
3.8
46
78
12
198
28
28
21
21
1.98
40314648--40314791
46
3.1
44
76
15
141
29
28
20
22
1.98
40322593--40322697
39
2.7
40
86
10
153
21
28
22
26
1.99
40325164--40325379
43
5.0
43
88
3
265
28
26
17
27
1.97
40326950--40327030
34
2.4
34
83
2
101
32
7
16
44
1.75
40341136--40341168
12
2.9
11
91
8
57
9
12
0
78
0.95
40342182--40342236
3
18.3
3
100
0
110
67
0
0
32
0.91
40342296--40342370
15
5.1
13
79
19
60
76
1
2
20
0.99
40342296--40342370
8
10.1
7
72
18
55
76
1
2
20
0.99
40342295--40342370
14
5.1
14
80
12
80
76
1
2
19
0.98
40342289--40342373
31
2.8
31
79
15
86
75
2
2
20
1.03
40342296--40342373
16
5.1
15
83
9
88
75
1
2
20
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40342396--40342436
15
2.7
15
92
0
64
65
0
2
31
1.05
40345655--40345743
39
2.3
39
96
3
164
66
4
10
19
1.38
40355762--40355981
84
2.6
84
87
4
295
20
19
23
37
1.94
40355762--40355981
41
5.3
41
88
4
282
20
19
23
37
1.94
40361142--40361242
28
3.6
28
83
4
114
29
15
24
29
1.96
40371772--40371814
21
2.0
21
90
0
68
18
34
34
11
1.87
40371774--40371822
21
2.3
21
85
0
62
18
32
32
16
1.93
40373302--40373331
14
2.1
14
93
0
51
46
36
0
16
1.47
40373787--40374005
41
5.4
41
89
0
305
37
25
20
17
1.93
40374066--40374101
17
2.1
17
89
0
54
58
27
0
13
1.36
40374886--40374981
8
12.4
8
94
5
139
75
0
0
25
0.81
40374881--40374985
14
7.0
15
88
11
130
74
0
0
25
0.82
40374886--40374981
34
3.1
33
88
11
141
75
0
0
25
0.81
40374876--40374923
7
7.5
6
90
4
51
72
2
0
25
0.95
40375068--40375155
20
4.6
20
71
16
78
73
1
4
20
1.07
40375063--40375172
55
2.0
55
96
3
204
73
1
4
20
1.10
40378970--40379010
19
2.2
19
86
4
57
21
2
4
70
1.18
40399798--40399836
17
2.3
17
95
0
69
46
35
10
7
1.67
40406718--40406751
17
1.9
18
94
5
61
64
0
5
29
1.17
40407517--40407576
30
2.0
31
83
9
79
50
10
6
33
1.62
40409490--40409649
27
5.9
27
86
5
182
33
21
24
20
1.97
40409496--40409649
81
1.9
82
83
4
204
32
22
24
20
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40411268--40411403
26
5.2
26
90
0
218
36
24
5
33
1.80
40415207--40415245
21
2.0
21
85
10
55
46
20
12
20
1.83
40415216--40415255
21
1.9
21
85
10
55
45
22
15
17
1.85
40416784--40416847
31
2.1
31
90
0
101
25
23
15
35
1.94
40417055--40417205
23
6.4
24
90
4
227
25
21
22
29
1.99
40417055--40417205
47
3.2
48
87
4
227
25
21
22
29
1.99
40417263--40417288
9
2.9
9
100
0
52
42
23
0
34
1.54
40417275--40417330
20
2.8
20
83
0
67
32
19
10
37
1.86
40417310--40417347
17
2.2
18
85
4
51
31
21
7
39
1.82
40417367--40417414
25
1.9
25
86
0
69
25
16
25
33
1.96
40421052--40421083
16
1.9
17
93
6
57
62
0
6
31
1.20
40423320--40423413
42
2.2
42
98
0
179
20
27
28
23
1.99
40425434--40425518
30
3.0
29
82
5
75
29
23
14
32
1.94
40425445--40425518
30
2.5
30
88
2
114
27
27
13
32
1.94
40427918--40428173
40
6.4
40
87
7
260
26
27
21
24
1.99
40427951--40428173
80
2.8
79
89
2
322
26
27
21
23
1.99
40427951--40428173
120
1.9
120
87
3
333
26
27
21
23
1.99
40435944--40436196
39
6.4
40
90
4
347
26
27
22
24
1.99
40447993--40448043
20
2.5
20
96
0
93
17
25
35
21
1.95
40454341--40454595
55
4.8
54
77
12
244
35
18
24
21
1.95
40454351--40454548
108
1.8
109
86
6
294
34
18
24
22
1.96
40454787--40454817
16
1.9
16
93
0
53
41
0
22
35
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40472932--40473180
55
4.7
55
77
11
234
35
17
24
22
1.95
40472942--40473139
108
1.8
110
87
4
303
33
17
25
23
1.96
40473378--40473408
16
1.9
16
93
0
53
41
0
22
35
1.54
40477429--40477465
17
2.2
17
95
0
65
27
32
29
10
1.90
40478080--40478119
20
2.0
20
90
0
62
20
30
17
32
1.95
40478994--40479076
25
3.3
25
84
0
103
37
16
20
25
1.93
40480582--40480684
29
3.6
28
80
5
116
29
33
16
21
1.95
40485083--40485489
45
9.1
45
89
1
552
29
28
18
24
1.98
40495408--40495625
79
2.8
79
92
4
345
22
22
27
27
1.99
40495408--40495625
40
5.6
40
91
4
340
22
22
27
27
1.99

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328