Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr07 97507971 
Parameters: 2 7 7 80 10 50 1000
Length:  97507971

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   

This is table  156  of  328  ( 39316 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45587447--45587489
6
6.8
6
84
10
59
67
2
0
30
1.03
45590149--45590271
44
2.7
47
88
6
182
32
15
16
35
1.90
45590887--45590929
22
2.0
22
90
0
68
51
34
0
13
1.42
45590888--45590972
37
2.3
36
78
8
89
54
31
0
14
1.40
45590923--45590989
22
2.9
24
72
14
70
53
28
0
17
1.44
45590903--45590980
37
2.1
37
85
0
102
52
32
0
15
1.43
45591275--45591775
132
3.8
132
92
0
815
33
25
15
25
1.95
45591675--45591845
91
1.9
91
87
2
254
34
22
15
26
1.95
45591675--45591866
91
2.1
91
85
3
253
33
24
14
27
1.94
45593856--45593931
35
2.2
35
86
9
102
39
0
5
55
1.23
45594128--45594180
21
2.5
21
90
0
79
30
35
9
24
1.87
45594330--45594580
70
3.6
70
89
2
335
28
25
18
26
1.98
45594826--45594992
83
2.0
83
98
0
325
34
7
13
44
1.71
45595890--45596015
42
3.0
41
77
11
119
23
15
26
34
1.95
45595935--45596036
42
2.4
44
77
12
113
26
15
23
34
1.95
45597647--45598701
209
5.0
210
74
4
555
29
26
17
26
1.97
45597712--45598701
279
3.5
278
76
3
860
29
26
17
26
1.97
45598411--45598662
139
1.8
139
83
0
333
31
26
16
25
1.96
45597647--45598701
70
15.1
70
76
1
743
29
26
17
26
1.97
45600534--45600571
18
2.1
18
90
0
58
10
36
36
15
1.82
45604637--45604699
19
3.3
19
72
12
58
57
1
3
38
1.24
45605387--45605446
28
2.1
28
84
0
75
31
30
5
33
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45606484--45606516
12
2.8
12
90
0
57
0
27
54
18
1.44
45610784--45610846
28
2.2
28
91
0
99
31
30
6
31
1.83
45613833--45613864
15
2.1
15
100
0
64
34
12
21
31
1.91
45615172--45615222
22
2.3
23
80
10
61
54
0
0
45
0.99
45616970--45617023
20
2.6
21
82
11
67
35
0
7
57
1.27
45619131--45619446
46
6.9
46
92
0
490
39
14
23
22
1.91
45620739--45620775
4
9.2
4
100
0
74
75
0
0
24
0.80
45620849--45620894
15
2.9
15
90
6
65
67
0
6
26
1.15
45620843--45620929
44
2.0
44
82
13
108
65
0
8
26
1.20
45620859--45620927
15
4.7
14
77
12
59
63
0
8
27
1.23
45632390--45632499
26
4.2
26
94
2
177
34
4
24
36
1.76
45633939--45634013
26
2.8
26
83
4
78
34
20
12
33
1.89
45634117--45634283
27
6.2
27
89
2
228
18
25
22
34
1.96
45657348--45657388
15
2.8
15
75
17
50
70
0
0
29
0.87
45660258--45660303
22
2.1
22
88
8
67
39
15
13
32
1.85
45661468--45661533
3
22.0
3
88
0
96
60
0
4
34
1.17
45663104--45663134
2
15.5
2
100
0
62
48
0
0
51
1.00
45663648--45663689
2
21.0
2
100
0
84
50
0
0
50
1.00
45673069--45673108
20
2.0
20
90
0
62
65
2
0
32
1.06
45673077--45673297
119
1.8
121
87
1
329
52
13
2
32
1.54
45673309--45673336
3
9.3
3
100
0
56
64
0
0
35
0.94
45676311--45676340
15
2.0
15
93
0
51
66
3
0
30
1.07
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45682029--45682061
6
5.7
6
92
7
59
84
0
0
15
0.61
45684081--45684291
28
7.5
28
86
0
251
24
20
15
40
1.90
45684081--45684291
56
3.8
56
88
0
278
24
20
15
40
1.90
45686886--45686990
54
1.9
54
94
0
183
26
23
29
20
1.99
45688918--45689003
43
2.0
43
97
0
163
22
20
8
48
1.75
45689697--45690162
48
9.7
48
87
2
600
24
17
30
27
1.97
45698151--45698194
20
2.2
20
84
4
54
25
2
11
61
1.41
45703570--45703607
16
2.4
16
100
0
76
26
34
15
23
1.95
45707705--45707731
13
2.1
13
100
0
54
14
0
0
85
0.61
45710883--45710917
12
2.9
12
91
0
52
31
40
0
28
1.57
45719243--45719279
11
3.4
11
92
7
58
54
0
0
45
1.00
45720174--45720200
2
13.5
2
100
0
54
0
48
0
51
1.00
45721594--45721837
124
2.0
124
90
3
384
22
18
21
38
1.94
45725688--45725760
29
2.6
29
77
12
80
31
1
23
43
1.62
45725812--45725890
34
2.5
32
84
12
92
40
0
16
43
1.48
45725863--45725910
22
2.2
22
88
0
69
43
4
12
39
1.62
45725811--45725974
86
1.9
86
86
2
231
41
1
15
40
1.58
45725880--45725980
30
3.3
29
77
17
96
38
2
18
39
1.66
45725881--45726000
28
3.9
30
76
13
111
40
2
18
38
1.64
45726063--45726437
126
3.0
126
87
1
556
36
16
16
30
1.91
45730532--45730701
43
4.0
42
77
11
150
31
25
19
23
1.98
45730532--45730699
86
2.0
85
84
5
223
31
25
19
23
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45734031--45734122
24
3.8
24
88
0
121
33
31
14
20
1.92
45743477--45743519
17
2.4
18
80
3
52
44
9
25
20
1.81
45743572--45743667
30
3.2
30
83
4
113
13
13
40
32
1.84
45745117--45745205
41
2.2
41
88
8
128
65
3
1
30
1.16
45746293--45746345
3
17.3
3
81
11
54
62
0
5
32
1.19
45747805--45747858
21
2.6
21
81
0
63
37
1
24
37
1.66
45749969--45750185
40
5.5
40
86
6
275
24
29
23
22
1.99
45758164--45758380
40
5.5
40
86
6
275
24
29
23
22
1.99
45761018--45761045
12
2.3
12
100
0
56
7
0
14
78
0.95
45761127--45761189
30
2.1
30
90
0
99
22
1
15
60
1.44
45769652--45769774
50
2.4
51
89
2
185
35
14
22
26
1.93
45769756--45769866
31
3.6
31
90
0
177
27
16
28
27
1.97
45772597--45772820
42
5.0
42
84
9
220
29
28
15
27
1.96
45772632--45772851
97
2.4
92
83
8
277
29
28
15
26
1.96
45772667--45772820
48
3.2
48
91
1
245
29
29
14
25
1.95
45774790--45774819
10
2.8
11
90
10
53
53
26
0
20
1.46
45775635--45775765
40
3.3
40
78
9
144
31
23
18
26
1.97
45775659--45775772
41
2.9
40
75
16
112
34
23
15
26
1.95
45776286--45776389
5
20.8
5
97
0
199
59
0
0
39
1.04
45776371--45776455
42
1.9
45
83
11
113
41
3
1
54
1.25
45778404--45778488
5
16.8
5
72
24
63
40
0
2
57
1.11
45778420--45778482
8
7.2
8
86
13
81
39
0
1
58
1.07
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45778407--45778490
42
2.0
41
84
11
109
41
0
2
55
1.12
45778602--45778643
2
22.0
2
90
9
70
47
0
0
52
1.00
45779358--45779400
18
2.3
19
88
11
63
37
0
25
37
1.56
45783257--45783293
18
2.1
18
94
0
65
48
24
5
21
1.71
45783282--45783311
10
2.8
11
90
10
53
53
26
0
20
1.46
45783286--45783318
10
3.3
10
91
8
50
57
24
0
18
1.40
45785517--45785566
25
2.0
25
100
0
100
36
20
8
36
1.82
45785736--45785995
72
3.6
72
83
3
292
31
27
16
24
1.97
45786282--45786324
19
2.3
19
96
4
79
48
16
4
30
1.66
45788256--45788330
36
2.1
36
90
9
118
13
26
2
57
1.50
45788308--45788343
19
1.9
18
88
5
54
0
25
2
72
0.98
45793197--45793726
250
2.1
250
84
1
686
42
12
12
32
1.80
45794885--45794937
26
2.0
27
85
7
74
24
15
22
37
1.92
45796424--45796583
26
6.2
26
90
0
257
36
23
6
33
1.81
45796424--45796583
52
3.1
52
96
0
284
36
23
6
33
1.81
45797435--45797675
117
2.1
118
96
1
450
43
6
14
36
1.71
45803760--45803812
26
2.0
26
88
0
79
43
24
7
24
1.80
45805535--45805600
28
2.4
26
73
14
60
30
3
9
57
1.45
45807057--45807121
28
2.5
26
78
11
73
40
1
3
55
1.25
45808598--45808720
37
3.3
37
97
0
228
24
33
18
23
1.97
45808765--45809388
48
13.0
48
92
0
1041
31
26
6
35
1.82
45808765--45809388
96
6.5
96
96
0
1149
31
26
6
35
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45810589--45810614
2
13.0
2
100
0
52
50
0
0
50
1.00
45814076--45814118
22
2.0
22
86
9
61
62
6
0
30
1.21
45814459--45814535
25
3.1
25
92
3
102
10
25
0
63
1.26
45819920--45819999
40
2.0
40
97
0
151
31
7
26
35
1.84
45820810--45821033
46
4.8
48
78
10
219
30
18
26
24
1.98
45820810--45821033
94
2.4
94
87
1
297
30
18
26
24
1.98
45820819--45821176
46
7.6
46
72
13
214
28
19
27
23
1.99
45820916--45821177
141
1.9
140
85
8
372
27
19
29
24
1.98
45823975--45824146
93
1.8
93
87
2
256
29
28
20
21
1.98
45823967--45824142
46
3.8
46
75
5
176
30
27
20
21
1.98

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328