Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr07 97507971 
Parameters: 2 7 7 80 10 50 1000
Length:  97507971

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   

This is table  308  of  328  ( 39316 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91528077--91528106
2
15.0
2
92
0
51
53
0
46
0
1.00
91532195--91532220
3
8.7
3
100
0
52
0
30
0
69
0.89
91535816--91535852
17
2.2
17
90
0
56
18
27
27
27
1.98
91537312--91537342
16
1.9
16
93
0
53
16
6
12
64
1.47
91540531--91540632
20
5.1
20
73
9
91
40
21
24
13
1.90
91541099--91541125
12
2.2
12
100
0
54
25
22
7
44
1.79
91542551--91542627
39
2.0
39
100
0
154
45
20
12
20
1.84
91544034--91544082
19
2.7
19
78
12
50
61
8
0
30
1.25
91546229--91546302
30
2.5
30
84
0
94
47
4
4
44
1.41
91546335--91546382
23
2.1
23
84
7
62
50
2
0
47
1.12
91547590--91547623
16
2.0
18
88
11
54
23
0
20
55
1.43
91555769--91555877
57
1.9
57
84
3
148
35
15
10
38
1.81
91556041--91556073
9
3.6
9
95
4
57
63
0
0
36
0.95
91556469--91556519
15
3.5
15
70
5
50
58
13
3
23
1.52
91559199--91559423
59
3.8
59
85
4
294
33
5
9
51
1.58
91561981--91562044
7
9.1
7
98
0
119
43
40
0
15
1.47
91564557--91564591
4
8.8
4
93
0
61
28
0
22
48
1.51
91565953--91565996
22
2.0
22
100
0
88
54
4
13
27
1.58
91566180--91566209
14
2.1
14
93
0
51
83
0
16
0
0.65
91569210--91569234
13
1.9
13
100
0
50
40
0
12
48
1.40
91573353--91573395
13
3.3
13
83
9
61
53
0
0
46
1.00
91577801--91577862
24
2.5
25
76
5
63
50
8
4
37
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91577927--91577977
23
2.2
23
79
6
59
54
3
1
39
1.30
91578027--91578068
20
2.0
21
86
4
59
57
9
0
33
1.31
91578104--91578168
3
21.7
3
96
0
121
64
1
0
33
1.03
91581250--91581520
18
14.6
18
70
11
145
36
15
12
35
1.86
91581237--91581532
36
8.0
36
71
11
179
37
14
12
35
1.84
91581335--91581393
17
3.3
19
81
11
70
42
15
11
30
1.83
91581330--91581520
54
3.5
53
75
7
179
37
15
12
35
1.85
91581649--91581765
47
2.5
47
90
2
182
39
23
22
15
1.92
91583415--91583466
18
2.9
18
79
0
50
32
19
9
38
1.84
91583434--91583488
18
3.1
18
83
0
65
32
16
12
38
1.86
91588551--91588595
19
2.4
18
86
13
65
0
33
0
66
0.92
91590287--91590337
27
1.9
26
88
11
77
47
3
5
43
1.46
91593386--91593422
3
12.3
3
100
0
74
67
0
0
32
0.91
91593717--91593835
58
2.1
58
100
0
238
16
37
15
29
1.90
91606064--91606098
17
2.1
17
89
5
54
37
0
11
51
1.38
91608069--91608139
31
2.2
32
79
13
76
60
0
1
38
1.06
91608084--91608143
21
2.9
20
75
20
52
61
0
1
36
1.06
91619817--91619905
30
3.0
29
75
11
90
42
10
8
38
1.70
91621786--91621835
24
2.1
24
84
0
64
30
6
10
54
1.58
91622725--91622771
7
6.9
7
82
2
60
46
36
2
14
1.57
91633804--91633881
39
2.0
37
83
11
95
30
2
2
64
1.21
91633837--91633876
19
2.2
19
91
8
66
30
0
2
67
1.04
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91633836--91633877
18
2.2
20
84
16
63
28
0
2
69
1.01
91638703--91638742
20
2.0
20
85
5
53
60
0
5
35
1.19
91639530--91639569
21
1.9
21
100
0
80
55
0
0
45
0.99
91639550--91639614
10
6.4
10
75
18
55
60
0
3
36
1.13
91639551--91639597
9
5.2
9
82
7
51
63
0
2
34
1.06
91645426--91645487
21
3.0
21
75
0
79
40
20
27
11
1.87
91645400--91645511
42
2.7
42
87
0
152
41
20
25
12
1.87
91645503--91645552
21
2.4
21
83
6
57
44
8
18
30
1.78
91647676--91647722
21
2.2
21
85
11
60
59
8
0
31
1.27
91647682--91647722
21
2.0
21
90
9
66
60
9
0
29
1.28
91648156--91648188
17
1.9
17
88
11
50
57
6
0
36
1.23
91648941--91648973
17
1.9
17
93
0
57
72
0
6
21
1.05
91652796--91652930
28
5.0
28
84
8
174
17
3
31
46
1.66
91652796--91652970
28
7.0
24
77
17
112
16
4
33
46
1.65
91653146--91653218
20
3.5
20
85
7
92
13
21
27
36
1.92
91654300--91654486
46
3.9
48
75
15
163
25
15
28
29
1.96
91657481--91657506
6
4.3
6
100
0
52
53
0
0
46
1.00
91657499--91657541
22
1.9
21
86
13
59
62
0
2
34
1.08
91666166--91666209
21
2.1
21
87
4
63
13
15
9
61
1.56
91669099--91669131
17
1.9
17
100
0
66
54
0
18
27
1.44
91677738--91677782
21
2.0
23
83
8
58
35
2
6
55
1.38
91680697--91680756
30
2.0
30
90
0
93
28
25
8
38
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91685222--91685252
5
6.2
5
100
0
62
41
0
0
58
0.98
91686158--91686213
21
2.5
23
80
13
73
51
0
8
39
1.33
91686335--91686359
12
2.1
12
100
0
50
16
24
20
40
1.91
91686663--91686733
18
3.9
18
79
0
88
36
9
15
38
1.81
91686660--91686733
36
2.1
36
86
0
103
37
9
14
37
1.79
91688380--91688412
2
16.5
2
93
0
57
45
0
0
54
0.99
91697260--91697319
31
1.9
31
83
6
77
45
11
6
36
1.67
91700963--91701005
22
2.0
22
81
9
52
48
0
4
46
1.22
91708263--91708331
3
23.0
3
100
0
138
66
0
0
33
0.92
91709898--91709970
26
3.2
24
76
17
66
69
5
0
24
1.09
91709898--91709954
26
2.4
25
85
11
75
70
5
0
24
1.08
91709930--91709972
22
2.0
22
86
9
61
72
6
0
20
1.08
91709923--91709986
21
3.1
21
74
12
53
68
10
0
20
1.19
91718044--91718100
30
1.9
30
85
7
80
64
7
1
26
1.28
91721201--91721271
19
3.7
20
85
9
94
57
8
0
33
1.29
91723568--91723593
12
2.2
12
100
0
52
15
7
19
57
1.62
91724226--91724250
13
1.9
13
100
0
50
56
0
0
44
0.99
91725636--91725675
20
2.0
21
85
5
55
27
0
27
45
1.54
91728839--91728873
15
2.4
15
90
4
54
25
0
5
68
1.11
91731733--91731762
15
2.1
15
93
6
53
33
6
3
56
1.42
91738107--91738137
15
2.0
16
93
6
55
61
0
0
38
0.96
91741411--91741455
18
2.6
18
78
3
56
35
0
0
64
0.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91743355--91743380
12
2.2
12
100
0
52
38
26
0
34
1.57
91746504--91746557
15
3.3
15
74
18
54
44
0
1
53
1.11
91746634--91746693
22
2.8
22
82
5
61
51
3
0
45
1.17
91752630--91752688
28
2.1
29
90
9
95
37
15
6
40
1.74
91758183--91758218
7
5.1
7
93
0
54
55
5
0
38
1.23
91758604--91758699
48
2.0
48
100
0
192
37
10
10
41
1.74
91762677--91762705
5
5.8
5
100
0
58
62
0
0
37
0.96
91764592--91764617
3
8.7
3
100
0
52
0
30
0
69
0.89
91769312--91769337
2
13.0
2
100
0
52
50
0
0
50
1.00
91770042--91770120
25
3.0
24
78
14
77
39
10
0
50
1.36
91770048--91770128
28
3.0
28
82
12
82
38
8
0
53
1.32
91771067--91771091
9
2.8
9
100
0
50
56
0
0
44
0.99
91771352--91771394
22
2.0
22
85
0
59
44
0
0
55
0.99
91771343--91771406
31
2.0
32
85
8
87
48
0
0
51
1.00
91772883--91772939
21
2.7
21
70
20
55
56
5
1
36
1.32
91781472--91781599
29
4.3
29
84
6
168
26
15
28
28
1.96
91783494--91783531
14
2.7
14
95
0
67
42
0
26
31
1.56
91787395--91787428
13
2.6
13
90
0
59
20
11
14
52
1.73
91789953--91789996
2
22.0
2
100
0
88
50
0
0
50
1.00
91790073--91790114
19
2.2
20
91
4
68
50
0
0
50
1.00
91794450--91794489
18
2.2
18
86
8
55
30
0
20
50
1.49
91795385--91795474
44
2.0
44
95
0
162
24
13
11
51
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91796219--91796271
21
2.5
21
87
6
72
13
32
33
20
1.91
91798101--91798133
9
3.7
9
91
0
57
24
12
24
39
1.89
91798099--91798133
18
1.9
18
100
0
70
28
11
22
37
1.89
91798185--91798221
9
4.1
9
92
0
65
45
13
10
29
1.77
91799246--91799271
5
5.2
5
100
0
52
19
19
19
42
1.90
91803810--91803848
15
2.6
14
84
11
51
38
0
15
46
1.46
91806252--91806292
19
2.2
19
100
0
82
36
17
9
36
1.82
91810373--91810424
27
1.9
27
88
0
77
42
9
17
30
1.81
91812117--91812155
12
3.2
12
85
0
51
51
5
0
43
1.24
91814194--91814237
23
1.9
23
90
0
70
61
4
2
31
1.28

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328