Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr07 97507971 
Parameters: 2 7 7 80 10 50 1000
Length:  97507971

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   

This is table  316  of  328  ( 39316 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93753979--93754025
8
5.9
8
78
9
51
80
0
17
2
0.80
93753966--93754032
6
10.5
6
74
25
50
77
2
17
1
0.97
93753979--93754032
17
3.1
17
81
7
56
79
0
18
1
0.82
93761148--93761459
46
7.0
46
88
6
417
21
23
15
39
1.91
93761372--93761447
38
2.0
38
100
0
152
21
26
18
34
1.96
93763593--93763644
11
4.7
11
76
9
52
63
3
0
32
1.12
93770310--93770337
2
14.0
2
100
0
56
50
0
0
50
1.00
93770525--93770558
17
2.0
17
100
0
68
64
0
17
17
1.29
93771261--93771332
14
4.9
14
77
12
74
45
1
1
51
1.18
93771698--93771724
3
9.0
3
100
0
54
0
33
0
66
0.92
93779250--93779286
16
2.2
17
90
4
58
45
0
2
51
1.15
93779310--93779335
11
2.4
11
100
0
52
15
15
0
69
1.20
93780028--93780069
22
1.9
22
90
0
66
54
0
2
42
1.13
93784882--93784911
14
2.1
14
93
0
51
70
0
3
26
1.03
93785062--93785093
2
16.0
2
100
0
64
50
0
0
50
1.00
93785230--93785291
32
1.9
32
83
9
81
69
0
6
24
1.12
93786458--93787060
133
4.6
133
88
5
917
25
24
21
28
1.99
93786472--93787060
255
2.3
257
90
4
909
26
23
21
28
1.99
93797175--93797207
14
2.4
14
89
0
57
69
0
3
27
1.03
93797168--93797217
23
2.2
23
82
7
57
70
0
4
26
1.05
93797361--93797387
2
13.5
2
100
0
54
51
0
0
48
1.00
93798801--93799369
43
12.9
45
63
14
182
25
24
22
27
2.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93798756--93799369
133
4.6
133
95
0
1077
25
24
22
27
2.00
93800210--93800269
17
3.5
17
74
21
63
65
0
1
33
1.03
93800745--93800843
18
5.5
18
92
3
164
37
14
11
37
1.81
93800745--93800852
35
3.0
36
90
8
166
37
14
10
37
1.80
93801020--93801044
2
12.5
2
100
0
50
52
0
0
48
1.00
93802415--93803017
133
4.6
133
87
5
899
26
23
21
28
1.99
93802429--93803017
255
2.3
257
90
4
900
26
23
21
28
1.99
93813128--93813160
14
2.4
14
89
0
57
69
0
3
27
1.03
93813121--93813170
23
2.2
23
82
7
57
70
0
4
26
1.05
93813314--93813340
2
13.5
2
100
0
54
51
0
0
48
1.00
93814754--93815322
43
12.9
45
63
14
182
25
24
22
27
2.00
93814709--93815322
133
4.6
133
95
0
1077
25
24
22
27
2.00
93816163--93816222
17
3.5
17
74
21
63
65
0
1
33
1.03
93816698--93816796
18
5.5
18
92
3
164
37
14
11
37
1.81
93816698--93816805
35
3.0
36
90
8
166
37
14
10
37
1.80
93817802--93817855
16
3.4
16
78
0
72
38
3
25
31
1.74
93817837--93817928
44
2.1
45
87
6
134
30
4
28
36
1.76
93818457--93818556
29
3.5
28
71
12
87
23
31
2
44
1.65
93818717--93818993
144
1.9
143
88
2
414
32
5
17
44
1.70
93820400--93820520
9
12.8
9
67
14
57
41
1
4
52
1.30
93820425--93820496
20
3.7
19
75
18
67
41
0
2
55
1.14
93828507--93828586
37
2.2
37
95
2
144
25
27
5
42
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93830299--93830347
3
16.3
3
100
0
98
34
0
0
65
0.93
93832056--93832112
4
14.8
4
87
7
82
21
1
26
50
1.58
93833583--93833643
19
3.2
19
79
9
63
55
1
8
34
1.39
93834778--93834829
24
2.2
24
89
0
77
34
3
7
53
1.48
93839645--93839831
95
2.0
95
98
0
365
40
11
14
33
1.82
93843760--93843797
2
19.0
2
100
0
76
50
0
0
50
1.00
93844583--93844631
20
2.4
20
83
13
64
51
10
0
38
1.36
93847876--93848003
63
2.0
63
98
0
247
46
1
29
21
1.61
93848649--93848712
22
2.7
23
76
9
67
10
17
25
46
1.80
93848671--93848736
22
3.0
22
75
4
69
12
22
25
39
1.89
93848649--93848736
45
1.9
46
86
4
124
11
19
25
44
1.84
93850864--93850888
6
4.2
6
100
0
50
52
0
0
48
1.00
93851047--93851111
29
2.2
29
83
5
78
58
1
3
36
1.23
93854380--93854404
2
12.5
2
100
0
50
48
0
0
52
1.00
93859248--93859537
144
2.1
140
86
6
399
41
7
5
45
1.56
93859778--93859821
22
2.0
23
90
4
72
84
0
11
4
0.77
93860020--93860075
29
1.9
29
92
0
94
69
8
19
1
1.24
93860026--93860079
15
3.7
15
72
5
56
75
5
18
0
0.98
93865888--93865942
18
3.0
18
78
7
58
25
5
0
69
1.10
93872898--93872929
2
16.0
2
100
0
64
50
0
0
50
1.00
93884427--93884510
2
41.5
2
97
2
159
48
1
0
50
1.08
93892655--93892850
54
3.7
51
74
8
160
33
16
25
25
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93895756--93895857
25
4.0
25
72
16
77
26
10
27
35
1.90
93895771--93895887
26
4.6
25
69
16
80
27
11
26
35
1.90
93895720--93895887
76
2.2
76
83
6
214
27
12
25
35
1.92
93896942--93897007
34
1.9
34
93
0
114
27
18
6
48
1.71
93899396--93899428
17
2.0
17
88
5
50
60
0
0
39
0.97
93916030--93916079
26
1.9
26
95
0
91
18
12
18
52
1.75
93916174--93916210
6
6.2
6
93
0
56
16
21
0
62
1.33
93920289--93920331
11
3.8
11
78
6
50
79
0
0
20
0.74
93920274--93920331
6
9.7
6
76
14
57
77
0
3
18
0.91
93926283--93926339
30
1.9
30
92
0
96
12
31
33
22
1.91
93929953--93930290
145
2.3
151
83
9
426
55
14
10
19
1.68
93935743--93935767
2
12.5
2
100
0
50
48
0
0
52
1.00
93941271--93941339
30
2.3
30
79
0
84
26
44
5
23
1.75
93941869--93941936
30
2.3
30
92
0
109
19
5
50
25
1.70
93942616--93943041
91
4.7
91
78
9
378
37
18
15
28
1.91
93942607--93943238
87
7.0
87
80
7
472
38
17
15
27
1.91
93942953--93942985
14
2.4
14
94
0
57
63
6
12
18
1.48
93942570--93943954
148
8.3
176
77
12
621
36
18
15
28
1.92
93942731--93943238
92
5.7
87
82
8
450
38
18
15
27
1.91
93943150--93943754
148
4.1
146
86
4
736
34
19
15
30
1.93
93943150--93943734
73
7.9
74
83
5
695
32
20
16
30
1.94
93943669--93943922
90
2.7
90
80
14
298
36
18
16
28
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93943924--93943968
13
3.4
13
84
6
63
68
4
11
15
1.34
93943760--93944041
100
2.8
101
88
2
399
39
18
17
25
1.92
93944312--93944359
16
3.1
15
80
19
62
27
0
2
70
0.98
93945231--93945294
19
3.4
19
82
8
69
15
7
1
75
1.11
93945242--93945294
19
2.8
18
85
8
70
15
9
0
75
1.04
93955942--93955985
21
2.1
21
83
8
54
59
0
6
34
1.24
93956438--93956503
30
2.2
30
81
10
73
36
4
9
50
1.55
93974374--93974402
11
2.6
11
100
0
58
0
13
0
86
0.58
93979959--93980113
52
3.0
52
77
8
152
29
18
23
28
1.98
93989768--93989801
17
1.9
18
88
5
52
11
17
0
70
1.16
93993751--93993805
18
3.2
18
82
5
60
36
9
1
52
1.44
93995205--93995242
19
2.1
19
90
5
60
39
5
0
55
1.23
94001863--94001894
15
2.1
15
100
0
64
56
18
12
12
1.67
94007514--94007609
41
2.3
41
85
3
131
21
17
20
39
1.92
94012756--94012820
18
3.7
18
78
10
64
32
1
1
64
1.12
94012790--94012827
18
2.2
18
85
4
51
39
0
0
60
0.97
94014262--94014433
93
1.8
93
94
0
308
27
29
22
20
1.98
94014255--94014435
46
3.9
46
83
9
233
27
29
21
20
1.98
94016260--94016293
17
2.1
16
88
5
50
23
2
0
73
0.97
94027322--94027355
18
1.9
18
88
5
52
8
8
0
82
0.85
94027316--94027360
21
2.0
24
87
12
69
11
8
0
80
0.92
94028140--94028180
17
2.4
18
84
12
59
29
0
9
60
1.28
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
94028152--94028187
17
2.1
17
100
0
72
30
0
11
58
1.33
94030225--94030287
31
2.0
32
84
9
85
65
7
0
26
1.20
94030192--94030276
31
2.9
29
69
17
68
63
4
0
31
1.15
94030157--94030386
10
23.9
9
66
19
67
60
5
0
33
1.25
94030341--94030386
19
2.3
20
81
3
58
60
10
2
26
1.41
94030931--94031005
20
3.8
19
72
11
62
25
2
2
69
1.15
94031054--94031126
10
8.0
9
70
18
53
35
0
2
61
1.10
94031053--94031133
28
3.0
28
72
23
82
34
0
4
60
1.18
94033534--94033595
30
2.1
30
100
0
124
51
3
9
35
1.51
94033802--94033888
31
2.8
30
78
11
95
36
10
11
41
1.75

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328