Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr07 97507971 
Parameters: 2 7 7 80 10 50 1000
Length:  97507971

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   

This is table  154  of  328  ( 39316 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45043459--45043509
24
2.1
24
85
7
68
35
1
1
60
1.19
45043453--45043524
33
2.2
33
85
2
92
36
2
1
59
1.20
45051407--45051435
2
14.5
2
100
0
58
51
0
0
48
1.00
45051435--45051463
2
14.5
2
100
0
58
51
0
48
0
1.00
45054776--45054819
18
2.4
18
85
11
54
59
0
0
40
0.98
45059752--45059776
13
1.9
13
100
0
50
64
16
4
16
1.44
45061843--45062002
29
5.5
29
82
4
180
26
16
31
25
1.97
45068089--45068318
49
4.7
49
74
9
202
27
19
30
23
1.98
45068086--45068318
98
2.4
96
81
5
245
27
19
30
23
1.98
45068291--45068362
30
2.3
30
92
4
117
26
20
20
31
1.98
45075830--45076003
49
3.6
47
80
9
165
27
22
28
21
1.99
45081250--45081311
30
2.1
30
90
0
97
33
16
14
35
1.89
45082796--45082833
18
2.1
19
90
5
60
60
0
23
15
1.35
45085346--45085392
24
2.0
24
95
0
85
65
8
2
23
1.31
45085348--45085396
13
3.9
13
73
10
57
65
8
2
24
1.31
45086242--45086436
47
3.9
53
79
9
148
25
14
28
32
1.94
45086257--45086417
47
3.3
46
82
7
169
27
14
26
31
1.95
45095252--45095301
17
2.9
17
75
13
50
0
24
2
74
0.93
45097858--45097958
39
2.5
40
85
1
132
30
22
24
21
1.99
45097858--45098040
40
4.6
40
82
3
181
27
22
26
23
1.99
45097899--45098085
80
2.3
80
79
3
189
24
22
29
24
1.99
45105938--45106038
39
2.5
40
85
1
132
30
22
24
21
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45105938--45106120
40
4.6
40
82
3
181
27
22
26
23
1.99
45115856--45115884
15
1.9
15
100
0
58
75
0
20
3
0.94
45121212--45121246
8
4.4
8
89
10
54
0
8
0
91
0.42
45121212--45121247
9
4.2
9
93
6
58
0
8
0
91
0.41
45121212--45121247
17
2.2
16
95
5
63
0
8
0
91
0.41
45130871--45130922
27
2.0
27
92
3
88
21
32
36
9
1.86
45130936--45130977
22
1.9
22
90
0
66
23
38
21
16
1.93
45131065--45131135
3
23.7
3
91
5
117
63
0
36
0
0.95
45131643--45131669
14
1.9
14
100
0
54
51
0
3
44
1.19
45131665--45132834
146
8.1
143
89
5
1695
58
8
6
26
1.51
45132192--45132250
30
2.1
27
82
14
68
66
5
5
23
1.32
45132810--45132844
17
2.1
17
89
10
54
68
11
2
17
1.31
45140375--45140421
24
2.0
24
91
0
76
34
4
21
40
1.73
45146010--45146193
67
2.9
63
75
8
174
29
16
30
23
1.96
45147276--45147304
2
14.5
2
100
0
58
48
0
0
51
1.00
45153978--45154006
15
1.9
15
100
0
58
27
0
13
58
1.36
45155637--45156008
27
13.8
27
82
3
336
40
19
9
30
1.84
45156468--45156532
22
3.0
22
82
8
78
23
23
20
33
1.97
45156631--45156702
32
2.2
32
80
4
74
29
18
22
30
1.97
45158019--45158170
78
1.9
79
91
1
252
25
13
26
33
1.94
45159212--45159529
27
11.7
27
79
3
201
42
16
9
31
1.81
45159207--45159472
81
3.3
80
78
6
223
43
16
9
30
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45159767--45159845
41
1.9
41
87
5
115
21
16
30
31
1.95
45159990--45160054
22
3.0
22
75
8
69
21
26
21
30
1.98
45163210--45163248
15
2.5
15
83
4
51
43
5
2
48
1.38
45164539--45164604
33
2.0
33
100
0
132
21
12
18
48
1.80
45165503--45165543
17
2.3
18
84
12
50
19
14
26
39
1.90
45170199--45170409
46
4.5
45
78
13
187
31
18
27
22
1.97
45171365--45171420
28
2.0
29
92
3
96
10
19
48
21
1.79
45177850--45178077
47
4.9
48
74
10
186
26
16
31
25
1.97
45177813--45178028
46
4.6
46
75
11
161
28
18
29
23
1.98
45177855--45178028
93
1.9
95
83
9
232
27
18
30
23
1.98
45177854--45178077
93
2.4
94
77
8
215
26
16
31
25
1.97
45180350--45180405
28
2.0
28
96
0
103
39
19
21
19
1.93
45181041--45181087
21
2.2
22
84
3
60
40
14
4
40
1.66
45181196--45181224
15
1.9
15
100
0
58
27
20
10
41
1.85
45188529--45188569
21
2.0
21
85
9
57
19
17
26
36
1.94
45190400--45190462
26
2.4
26
89
0
99
22
30
19
28
1.98
45194275--45194445
93
1.8
93
93
0
297
28
28
21
22
1.99
45194267--45194442
46
3.8
46
79
12
207
28
28
20
22
1.98
45196357--45196445
30
3.0
30
80
8
101
57
15
16
10
1.65
45196357--45196436
15
5.4
15
80
7
92
58
13
17
10
1.62
45196368--45196445
15
5.2
15
78
9
79
56
15
16
11
1.67
45199358--45199528
93
1.8
93
96
0
315
28
29
21
21
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45199350--45199525
46
3.8
46
80
12
225
28
28
21
21
1.98
45202176--45202219
21
2.1
21
91
0
70
43
9
25
22
1.82
45209415--45209450
18
2.0
18
89
10
56
13
25
44
16
1.85
45209420--45209463
18
2.5
17
85
7
52
18
27
40
13
1.88
45216287--45216359
30
2.4
30
86
0
92
17
26
24
31
1.97
45218031--45218221
38
5.0
38
84
0
238
14
20
30
34
1.93
45219913--45219953
12
3.3
12
86
3
55
21
24
2
51
1.60
45220123--45220205
33
2.4
35
88
8
116
30
25
22
21
1.99
45221216--45221257
21
1.9
23
85
9
61
45
9
0
45
1.36
45230284--45230328
20
2.3
19
88
3
63
24
26
0
48
1.51
45230502--45230598
37
2.6
37
88
0
140
32
29
18
18
1.95
45231586--45231627
21
1.9
23
85
9
61
45
9
0
45
1.36
45233189--45233233
19
2.4
19
92
0
72
8
26
20
44
1.80
45242973--45243123
40
3.8
40
80
7
173
24
27
23
24
2.00
45242977--45243163
80
2.3
80
82
9
229
24
26
22
26
2.00
45250872--45250897
4
6.5
4
100
0
52
26
0
0
73
0.84
45252015--45252068
5
10.4
5
78
13
56
24
0
0
75
0.80
45252591--45252656
6
11.2
6
96
1
116
30
0
0
69
0.88
45252594--45252744
46
3.3
46
77
14
143
28
3
0
67
1.11
45252591--45252716
18
7.2
19
77
18
107
28
2
0
68
1.08
45252674--45252759
29
3.0
28
74
17
77
26
4
0
68
1.09
45252694--45252757
30
2.3
28
80
15
71
26
4
0
68
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45252722--45252757
13
2.8
13
91
8
56
22
5
0
72
1.05
45252844--45252906
25
2.5
24
76
16
65
30
7
1
60
1.35
45254302--45254326
13
1.9
13
100
0
50
12
0
0
88
0.53
45254297--45254346
22
2.1
25
85
10
70
20
0
2
78
0.86
45254843--45254874
16
2.0
16
93
0
55
28
0
6
65
1.16
45265479--45265611
31
4.3
31
67
16
96
41
12
6
39
1.68
45265491--45265607
62
1.9
62
82
10
150
42
11
6
38
1.69
45268718--45268756
20
1.9
21
84
5
53
53
0
17
28
1.44
45277804--45277853
17
2.9
17
85
8
66
22
0
6
72
1.07
45278691--45278901
41
5.2
40
87
4
246
37
22
20
19
1.94
45279059--45279152
14
6.7
14
71
18
61
26
1
26
45
1.60
45279208--45279269
14
4.4
14
71
6
54
19
0
43
37
1.51
45279194--45279250
27
2.1
28
83
9
73
22
0
36
40
1.55
45279213--45279263
21
2.5
20
84
6
66
19
0
43
37
1.51
45279215--45279269
21
2.7
21
75
13
60
20
0
43
36
1.52
45279936--45279973
3
12.7
3
100
0
76
68
0
0
31
0.90
45285656--45285696
19
2.2
19
86
4
57
21
2
4
70
1.18
45291407--45291434
2
14.0
2
100
0
56
50
0
0
50
1.00
45294666--45294706
7
5.6
7
91
8
64
65
2
0
31
1.05
45294659--45294706
23
2.1
23
92
7
80
66
2
0
31
1.03
45294655--45294713
8
7.5
8
84
7
68
66
1
1
30
1.12
45294655--45294724
31
2.3
30
76
13
72
65
1
1
31
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45294830--45294889
23
2.9
20
70
15
59
56
5
6
31
1.47
45294868--45294932
25
2.8
24
83
6
80
52
6
7
33
1.55
45295034--45295079
25
1.9
25
86
8
69
60
0
4
34
1.16
45295570--45295704
30
4.5
30
82
5
132
22
4
46
25
1.71
45296388--45296727
90
3.8
89
78
9
330
35
18
16
28
1.93
45296380--45296832
92
5.0
90
79
10
428
37
18
16
26
1.92
45296482--45296814
182
1.8
180
83
5
447
34
19
17
28
1.95
45296749--45297263
75
7.0
75
87
4
694
32
20
16
30
1.95
45296774--45297902
224
4.9
219
80
12
1099
33
20
15
30
1.94
45297194--45297428
87
2.7
87
82
6
271
36
21
15
26
1.93

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328