Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr07 97507971 
Parameters: 2 7 7 80 10 50 1000
Length:  97507971

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   

This is table  158  of  328  ( 39316 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46196733--46196775
21
2.0
21
86
0
59
44
20
13
20
1.86
46199225--46199410
40
4.7
40
84
5
209
24
20
27
26
1.99
46202524--46202685
43
3.8
42
79
9
179
30
26
18
24
1.98
46203903--46203942
21
1.9
21
84
0
53
40
20
15
25
1.90
46214836--46214904
28
2.5
28
95
2
122
18
10
27
43
1.82
46216530--46216567
20
1.9
20
88
0
58
52
10
2
34
1.50
46222839--46222895
28
2.0
28
100
0
114
17
10
26
45
1.81
46224514--46224551
20
1.9
20
88
0
58
52
10
2
34
1.50
46236710--46236768
30
2.0
30
83
6
75
30
23
5
40
1.76
46238236--46238266
12
2.6
12
100
0
62
67
6
12
12
1.40
46247237--46247554
48
6.9
48
89
7
496
34
7
27
29
1.85
46247276--46247357
37
2.2
37
97
0
155
34
8
25
31
1.86
46247695--46247797
37
2.8
37
95
0
179
23
19
32
25
1.98
46249075--46249313
40
6.0
40
96
0
433
20
22
30
26
1.98
46249477--46249527
25
2.0
25
81
7
59
35
13
29
21
1.92
46252393--46252645
40
6.4
40
88
4
331
26
26
22
24
2.00
46255847--46256063
48
4.5
48
97
0
407
34
7
27
30
1.84
46256031--46256095
32
2.0
32
96
0
121
30
10
27
30
1.91
46255983--46256143
80
2.0
80
97
0
304
33
8
27
30
1.87
46255936--46256191
128
2.0
128
98
0
494
34
7
27
30
1.85
46255887--46256235
176
2.0
176
96
0
644
34
8
26
30
1.85
46256063--46256248
48
3.9
48
96
0
327
35
7
26
30
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46256396--46256498
37
2.8
37
92
0
161
24
18
31
26
1.98
46263824--46263898
29
2.6
29
78
4
80
21
36
21
21
1.96
46263882--46263955
29
2.6
29
95
0
139
27
31
14
27
1.95
46267561--46267627
20
3.3
20
85
8
100
34
13
19
32
1.91
46267678--46267831
25
6.2
25
88
6
199
30
18
22
28
1.97
46267676--46267822
49
3.0
49
87
6
201
29
19
22
29
1.98
46269492--46269622
50
2.6
50
84
3
156
31
19
29
20
1.97
46269595--46269707
43
2.7
43
77
4
113
27
15
26
30
1.95
46272988--46273036
17
2.8
18
74
22
50
24
18
22
34
1.96
46273858--46274008
40
3.8
40
79
6
155
26
23
27
23
2.00
46273894--46274024
40
3.3
40
79
4
149
24
22
26
25
2.00
46276092--46276157
29
2.3
29
81
5
71
30
25
1
42
1.64
46282233--46282273
12
3.3
12
93
3
64
60
0
21
17
1.35
46284725--46284835
27
4.2
26
85
5
141
17
24
21
36
1.94
46291094--46291144
24
2.1
24
92
0
84
33
5
39
21
1.78
46292557--46292657
27
3.8
25
82
8
103
16
20
21
40
1.91
46308819--46308890
28
2.5
28
88
6
101
26
26
16
30
1.97
46312641--46312690
23
2.2
23
100
0
100
46
10
20
24
1.81
46325556--46325580
11
2.3
11
100
0
50
60
8
0
32
1.26
46325574--46325631
24
2.3
25
91
8
100
60
1
15
22
1.44
46325574--46325642
24
2.8
24
89
6
95
62
1
14
21
1.40
46327301--46327373
29
2.5
29
93
0
101
26
31
16
26
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46335145--46335175
2
15.5
2
93
0
53
51
3
0
45
1.17
46335268--46335340
29
2.5
29
93
0
101
26
31
16
26
1.96
46340205--46340333
46
2.8
46
92
0
204
18
21
29
30
1.97
46343241--46343311
15
4.7
15
76
11
74
12
19
11
56
1.66
46345674--46345841
46
3.6
45
76
9
160
22
21
27
28
1.99
46345670--46345842
93
1.9
93
87
4
260
21
21
28
27
1.99
46352327--46352420
6
15.3
6
72
16
77
48
14
15
20
1.80
46352341--46352420
31
2.6
31
95
0
142
48
15
16
20
1.81
46352552--46352653
27
3.8
26
83
5
114
37
20
22
19
1.95
46352812--46352873
22
2.8
23
85
7
83
33
19
22
24
1.97
46353303--46353739
27
16.3
27
85
0
572
24
20
20
35
1.96
46353724--46354064
27
12.6
27
79
4
276
32
8
20
38
1.83
46353833--46354064
54
4.3
54
90
2
349
32
8
18
39
1.82
46353833--46354071
81
3.0
80
85
1
307
33
8
19
38
1.82
46353857--46354064
27
7.7
27
88
0
290
32
7
19
39
1.80
46361915--46361986
29
2.5
28
86
8
92
25
30
18
26
1.98
46366002--46366071
27
2.5
28
93
2
115
27
14
28
30
1.95
46366002--46366083
27
3.0
27
84
8
69
28
15
25
30
1.96
46372249--46372327
29
2.7
29
86
5
106
27
32
15
24
1.95
46379519--46379597
29
2.7
29
86
5
106
27
32
15
24
1.95
46382425--46382483
22
2.7
22
76
21
70
74
3
0
22
0.96
46384724--46384786
18
3.5
18
100
0
126
20
31
41
6
1.77
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46385109--46385158
18
2.8
18
78
0
55
8
22
56
14
1.64
46392338--46392385
5
9.4
5
78
13
53
77
2
2
18
0.97
46392329--46392385
17
3.2
18
78
16
57
75
3
1
19
1.04
46392332--46392387
21
2.5
22
86
11
71
75
3
1
19
1.05
46393451--46393526
39
1.9
39
97
0
143
11
21
18
48
1.79
46395719--46395937
41
5.4
41
87
0
323
35
22
21
20
1.96
46396094--46396193
14
6.9
14
70
8
65
29
0
25
46
1.53
46396105--46396186
21
3.7
21
80
12
101
28
0
26
45
1.54
46396108--46396199
46
2.0
46
95
0
166
30
0
25
44
1.54
46396233--46396289
27
2.1
28
83
9
73
24
0
36
38
1.56
46396229--46396356
7
18.0
7
70
9
73
22
0
39
37
1.54
46397777--46397828
25
2.1
25
100
0
104
11
19
7
61
1.53
46398497--46398529
2
16.5
2
100
0
66
51
0
0
48
1.00
46401157--46401184
13
2.2
13
100
0
56
21
25
21
32
1.98
46401309--46401355
19
2.5
19
76
10
51
21
2
4
72
1.12
46401619--46401810
43
4.5
43
85
1
233
22
19
30
27
1.98
46405051--46405219
47
3.6
47
78
13
204
30
30
18
20
1.96
46405004--46405269
93
2.9
93
89
0
415
28
30
19
20
1.97
46404997--46405265
46
5.8
44
76
14
213
29
30
19
20
1.97
46407655--46407723
30
2.3
30
87
2
104
60
14
13
11
1.58
46407655--46407723
15
4.7
15
71
8
52
60
14
13
11
1.58
46410083--46410326
40
6.1
40
86
2
294
27
26
20
24
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46410413--46410605
64
3.1
64
59
15
141
34
26
10
29
1.89
46410295--46410633
123
2.8
123
95
0
597
33
25
10
30
1.89
46414046--46414089
23
1.9
23
95
0
79
34
29
18
18
1.94
46414000--46414136
69
2.0
69
91
0
220
30
27
20
21
1.98
46415961--46416285
169
1.9
169
84
3
431
35
16
17
30
1.92
46425089--46425142
20
2.8
19
77
5
63
68
1
3
25
1.16
46425244--46425269
10
2.6
10
100
0
52
23
7
0
69
1.14
46425356--46425400
21
2.1
21
83
0
54
37
0
2
60
1.09
46425362--46425408
23
2.1
21
84
7
58
31
2
2
63
1.18
46425733--46425810
38
2.1
38
92
0
129
43
8
15
32
1.78
46429225--46429323
28
3.5
29
80
6
105
30
26
15
28
1.96
46436563--46436659
28
3.4
29
80
7
101
30
24
14
29
1.95
46438363--46438432
27
2.5
28
86
2
97
32
25
14
27
1.94
46438440--46438546
42
2.5
42
96
0
196
22
33
14
28
1.94
46447208--46447390
39
4.6
39
86
0
231
23
22
31
22
1.99
46448823--46448891
27
2.5
28
85
2
95
33
24
14
27
1.94
46448899--46449005
42
2.5
42
96
0
196
22
33
14
28
1.94
46457993--46458051
6
10.0
6
87
3
84
79
1
3
15
0.94
46457973--46458069
18
5.6
17
78
7
81
76
1
5
17
1.03
46457993--46458069
23
3.4
22
84
8
84
79
1
5
14
0.97
46463412--46463444
13
2.6
13
90
4
50
48
12
0
39
1.40
46469378--46469647
46
5.7
47
78
8
214
24
30
18
26
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46469378--46469647
99
2.8
94
79
11
257
24
30
18
26
1.98
46469421--46469697
94
3.0
93
76
8
276
25
30
18
25
1.98
46469431--46469687
140
1.8
140
81
5
322
24
30
17
26
1.98
46482531--46482660
46
2.8
46
83
8
140
30
27
20
22
1.98
46496816--46497051
40
6.2
40
77
10
149
27
26
20
25
1.99
46505189--46505441
24
10.6
24
96
1
456
20
16
25
37
1.93
46512727--46513088
49
7.4
49
97
0
616
28
8
33
29
1.87
46513190--46513274
37
2.3
37
95
0
152
24
20
34
21
1.97
46522189--46522236
24
2.0
24
92
8
80
14
25
10
50
1.74
46522205--46522309
41
2.6
40
89
3
156
20
23
8
47
1.77

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328