Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr07 97507971 
Parameters: 2 7 7 80 10 50 1000
Length:  97507971

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   

This is table  325  of  328  ( 39316 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96230080--96230161
42
2.0
42
90
4
130
53
1
0
45
1.08
96230092--96230172
21
3.9
22
85
6
80
58
2
0
39
1.12
96231418--96231537
59
2.0
59
96
0
222
33
15
22
29
1.94
96232238--96232307
29
2.4
29
76
4
70
27
11
20
41
1.86
96236432--96236473
15
2.6
16
88
11
59
73
0
7
19
1.05
96241926--96242240
153
2.1
152
91
3
515
33
13
21
32
1.92
96244303--96244343
21
2.0
21
90
0
64
24
19
29
26
1.98
96245471--96245529
30
2.0
30
86
6
84
6
30
0
62
1.21
96245471--96245526
27
2.0
30
86
10
82
7
30
0
62
1.22
96245487--96245560
30
2.4
31
82
10
82
5
25
1
67
1.20
96250244--96250283
2
20.0
2
100
0
80
50
0
0
50
1.00
96250721--96250762
20
2.2
20
95
4
77
59
9
4
26
1.48
96251389--96251458
31
2.3
30
80
2
86
44
12
10
32
1.76
96254944--96254968
12
2.1
12
100
0
50
24
0
0
76
0.80
96264950--96264992
19
2.2
20
81
18
56
62
2
9
25
1.37
96264952--96264992
20
2.1
19
86
13
57
63
2
9
24
1.37
96265139--96265197
31
1.9
31
86
6
84
45
11
10
32
1.74
96266562--96266618
19
3.2
18
73
12
55
57
5
0
36
1.21
96268154--96268184
16
1.9
16
93
0
53
80
0
16
3
0.83
96270007--96270042
18
1.9
19
88
5
56
41
0
2
55
1.14
96270009--96270056
19
2.5
19
75
0
51
35
0
2
62
1.07
96270126--96270164
9
4.3
9
83
0
51
30
5
12
51
1.62
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96270126--96270164
18
2.2
18
95
0
69
30
5
12
51
1.62
96272936--96273004
21
3.2
21
62
22
52
44
2
14
37
1.60
96272916--96273005
44
2.0
44
97
0
171
44
3
13
38
1.60
96273570--96273622
16
3.3
16
80
15
65
30
1
1
66
1.13
96273922--96273983
20
3.4
18
80
19
76
48
0
1
50
1.10
96276023--96276049
2
13.5
2
100
0
54
51
0
0
48
1.00
96277346--96277375
2
15.0
2
100
0
60
0
50
0
50
1.00
96278313--96278819
194
2.7
184
85
7
638
26
14
22
37
1.92
96281302--96281356
26
2.1
26
82
0
65
20
14
10
54
1.69
96284267--96284320
25
2.2
25
96
0
99
40
12
11
35
1.79
96286841--96287003
52
3.1
52
85
2
202
32
27
14
25
1.95
96287047--96287117
35
2.0
35
100
0
142
26
19
8
45
1.79
96297751--96297786
2
18.0
2
100
0
72
50
0
0
50
1.00
96300768--96300817
20
2.5
20
100
0
100
48
18
4
30
1.66
96301459--96301496
19
2.0
19
100
0
76
15
21
26
36
1.93
96306087--96306114
2
14.0
2
100
0
56
50
0
0
50
1.00
96307299--96307352
21
2.5
21
79
8
56
0
29
5
64
1.16
96321961--96322061
51
2.0
51
98
0
193
19
17
19
42
1.89
96331178--96331235
29
2.0
29
100
0
116
31
3
51
13
1.58
96333726--96333762
14
2.5
15
91
8
58
29
0
2
67
1.04
96335416--96335453
6
6.3
6
100
0
76
34
0
15
50
1.45
96336892--96336931
21
1.9
21
89
0
62
45
10
0
45
1.37
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96350854--96350889
2
18.0
2
100
0
72
50
0
0
50
1.00
96351690--96351772
41
2.0
41
100
0
166
33
7
24
34
1.83
96351968--96352004
19
2.0
19
89
5
58
32
2
10
54
1.49
96353295--96353362
9
7.4
9
71
15
50
57
4
2
35
1.34
96353332--96353390
18
3.3
17
79
13
57
55
1
3
38
1.26
96353568--96353611
18
2.4
19
85
11
56
27
2
0
70
0.99
96353566--96353610
19
2.4
19
81
7
56
26
2
0
71
0.98
96353614--96353643
15
2.0
15
93
0
51
30
0
0
70
0.88
96364154--96364196
15
2.7
16
82
10
52
65
4
0
30
1.13
96369313--96369400
43
2.0
43
95
4
160
47
4
13
34
1.63
96369313--96369422
43
2.5
41
83
15
125
48
5
12
33
1.64
96373473--96373516
19
2.3
19
96
0
79
40
15
6
36
1.74
96379167--96379345
96
1.9
96
90
2
288
36
19
33
10
1.85
96382974--96383107
51
2.4
58
84
8
165
35
14
23
26
1.93
96382930--96383092
51
3.2
51
91
0
263
33
15
22
28
1.94
96384757--96384869
37
3.2
37
64
21
105
33
14
12
39
1.83
96384794--96384901
32
3.2
32
64
21
85
34
12
16
36
1.87
96384737--96384906
69
2.4
69
98
0
322
33
15
16
34
1.90
96389094--96389145
25
2.1
25
82
7
61
46
0
3
50
1.20
96389102--96389214
37
3.1
38
74
15
96
41
1
5
51
1.35
96389161--96389218
31
1.9
29
82
6
71
39
3
5
51
1.41
96389262--96389295
18
1.9
17
88
5
50
44
0
0
55
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96422165--96422202
20
1.9
20
88
0
58
52
10
2
34
1.50
96430121--96430158
20
1.9
20
84
10
51
50
10
5
34
1.59
96451916--96451940
10
2.5
10
100
0
50
40
0
0
60
0.97
96452974--96453049
37
2.1
37
97
0
143
42
11
10
35
1.76
96464130--96464168
16
2.4
17
86
8
62
66
0
2
30
1.05
96467492--96467593
51
2.0
51
96
0
186
23
20
5
50
1.70
96468149--96468207
14
4.1
14
78
4
55
35
1
6
55
1.36
96473516--96473554
13
2.9
13
84
3
51
28
0
2
69
1.02
96473538--96473575
20
1.9
20
89
10
60
21
2
5
71
1.19
96488930--96488954
2
12.5
2
100
0
50
48
0
0
52
1.00
96489134--96489172
17
2.3
17
90
0
69
20
7
5
66
1.36
96490049--96490146
46
2.1
46
100
0
196
20
6
22
51
1.69
96490865--96490919
27
2.0
27
100
0
110
41
18
14
25
1.88
96492662--96492687
13
2.0
13
100
0
52
0
15
0
84
0.62
96496252--96496292
21
2.0
21
90
0
64
29
21
29
19
1.98
96500593--96500620
14
2.0
14
100
0
56
21
7
21
50
1.72
96501113--96501146
18
1.9
18
88
5
52
29
0
5
64
1.17
96501234--96501321
33
2.7
33
73
16
85
62
0
0
37
0.95
96502662--96502716
27
2.1
26
93
3
92
65
5
3
25
1.31
96503022--96503054
16
2.1
16
88
11
50
63
0
0
36
0.95
96515212--96515510
146
2.0
146
94
0
517
42
23
6
27
1.79
96522014--96522504
176
2.8
175
89
2
734
35
20
13
30
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96522929--96522955
6
4.5
6
100
0
54
51
0
14
33
1.43
96524623--96524662
15
2.6
16
84
11
57
45
0
5
50
1.23
96524651--96524689
18
2.1
18
85
4
51
66
0
0
33
0.92
96524651--96524702
19
2.7
19
82
8
61
65
0
1
32
1.04
96525636--96525677
20
2.1
20
82
8
50
59
9
2
28
1.41
96533130--96533159
2
15.0
2
92
0
51
46
3
0
50
1.18
96534024--96534059
18
2.0
18
100
0
72
44
11
5
38
1.63
96534570--96534632
31
2.0
31
87
0
90
44
7
6
41
1.59
96538037--96538167
55
2.4
54
87
2
199
22
10
32
33
1.89
96540162--96540323
26
6.2
26
97
0
288
32
6
25
35
1.81
96547489--96547531
23
2.0
22
86
9
61
46
2
0
51
1.13
96552667--96552692
13
2.0
13
100
0
52
61
0
0
38
0.96
96565713--96565743
3
10.3
3
100
0
62
35
0
0
64
0.94
96569598--96569626
2
14.5
2
100
0
58
48
0
0
51
1.00
96576544--96576580
18
2.1
18
100
0
74
32
0
21
45
1.52
96578231--96578272
6
7.0
6
100
0
84
16
0
0
83
0.65
96594665--96594705
17
2.3
17
87
8
55
31
0
2
65
1.05
96594904--96594954
21
2.3
21
74
12
50
31
5
0
62
1.19
96594986--96595034
18
2.8
17
84
3
62
40
6
0
53
1.26
96597403--96597454
25
2.0
27
85
7
72
76
3
1
17
1.02
96599833--96599858
2
13.0
2
100
0
52
50
0
50
0
1.00
96614736--96614769
14
2.5
14
85
4
52
47
5
0
47
1.26
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96615249--96615289
8
5.1
8
100
0
82
51
0
12
36
1.40
96615249--96615297
24
2.0
24
84
0
62
57
0
12
30
1.36
96618171--96618199
2
14.5
2
100
0
58
0
0
48
51
1.00
96622873--96622979
39
2.7
39
92
0
169
38
22
25
14
1.91
96622891--96622955
21
3.2
21
74
12
82
40
21
26
12
1.88
96627454--96627532
36
2.2
36
90
0
122
44
20
7
27
1.78
96627843--96627914
34
2.1
34
89
0
108
33
38
11
16
1.84
96627843--96627983
33
4.2
33
84
0
120
38
34
9
18
1.83
96629939--96629969
13
2.4
13
94
0
53
22
22
6
48
1.73
96630914--96630980
3
22.3
3
93
0
116
31
1
1
65
1.10

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328