Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr07 97507971 
Parameters: 2 7 7 80 10 50 1000
Length:  97507971

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   

This is table  318  of  328  ( 39316 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
94330215--94330405
91
2.1
93
86
5
262
30
7
18
43
1.78
94331567--94331605
2
19.5
2
87
10
53
46
0
2
51
1.14
94349217--94349345
44
2.8
45
82
4
152
34
13
24
27
1.93
94356598--94356726
44
2.8
45
82
4
152
34
13
24
27
1.93
94364214--94364258
19
2.3
20
78
17
51
66
8
13
11
1.44
94372545--94372622
32
2.4
34
79
18
94
41
0
0
58
0.98
94377488--94377518
16
1.9
16
93
0
53
48
6
6
38
1.55
94379997--94380028
2
16.5
2
93
6
57
50
0
0
50
1.00
94381205--94381308
50
2.1
48
96
3
190
18
25
16
40
1.90
94389009--94389058
26
2.0
24
88
7
73
64
6
0
30
1.18
94389029--94389087
21
2.8
21
75
12
50
67
10
0
22
1.20
94389134--94389166
15
2.1
16
88
11
50
69
0
0
30
0.88
94391141--94391207
29
2.3
29
82
5
82
55
1
0
43
1.09
94391791--94391816
13
2.0
13
100
0
52
46
7
7
38
1.61
94398904--94398980
38
2.0
38
97
0
145
20
19
18
41
1.90
94400838--94400886
21
2.4
21
83
13
66
53
0
0
46
1.00
94400978--94401099
61
2.0
61
98
0
235
27
18
12
42
1.85
94401673--94401724
25
2.0
27
81
11
63
51
3
3
40
1.38
94409957--94409999
18
2.4
18
80
7
52
46
2
0
51
1.13
94412102--94412140
18
2.1
18
85
4
51
58
23
0
17
1.38
94414759--94414803
20
2.3
20
84
3
56
42
0
28
28
1.56
94414766--94414805
20
2.0
20
95
0
71
37
0
27
35
1.57
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
94427639--94427680
16
2.6
16
81
7
50
59
0
4
35
1.19
94430362--94430392
12
2.6
12
94
0
53
0
25
0
74
0.82
94430472--94430502
16
1.9
16
93
0
53
54
3
0
41
1.16
94434523--94434581
29
2.0
29
100
0
118
10
23
6
59
1.54
94434618--94434670
15
3.6
15
82
2
54
50
28
0
20
1.48
94440069--94440173
42
2.5
42
84
1
131
20
24
19
35
1.96
94441734--94441813
40
2.0
40
95
0
142
36
27
5
31
1.78
94447240--94447278
21
1.9
20
84
5
51
43
12
17
25
1.85
94449851--94449891
20
2.0
20
100
0
82
36
9
19
34
1.85
94449985--94450178
103
1.9
103
87
0
289
40
19
18
22
1.92
94456874--94456904
9
3.3
9
91
8
53
19
3
0
77
0.90
94461329--94461363
9
3.9
9
89
10
54
17
2
0
80
0.84
94464049--94464137
27
3.2
27
78
20
103
39
6
16
37
1.76
94464484--94464546
12
5.4
12
71
22
55
47
0
3
49
1.17
94464484--94464546
22
2.7
23
77
20
69
47
0
3
49
1.17
94464610--94464660
26
2.0
26
88
3
77
50
7
1
39
1.42
94464733--94464821
44
2.0
45
85
12
121
35
25
5
32
1.80
94464807--94464861
16
3.4
16
85
5
76
30
27
5
36
1.79
94467503--94467579
39
2.0
39
84
5
102
38
5
7
48
1.55
94468378--94468437
27
2.2
27
88
5
86
78
0
10
11
0.97
94473794--94473835
21
2.0
21
100
0
84
61
4
9
23
1.45
94474259--94474328
8
8.6
8
71
7
52
51
1
1
45
1.18
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
94474260--94474330
24
3.0
23
71
17
65
50
1
1
46
1.18
94478052--94478117
25
2.6
25
97
0
123
28
33
13
24
1.93
94478294--94478323
8
3.9
8
95
4
53
90
0
0
10
0.47
94478610--94478649
17
2.4
17
95
0
71
67
15
5
12
1.38
94479434--94479464
3
10.3
3
100
0
62
32
0
0
67
0.91
94479563--94479599
3
12.3
3
100
0
74
32
0
0
67
0.91
94479434--94479793
135
2.6
135
96
1
648
30
3
7
58
1.44
94479698--94479746
3
16.7
3
95
4
91
34
0
0
65
0.93
94480023--94480074
15
3.5
15
80
17
63
36
7
1
53
1.41
94480113--94480167
21
2.6
21
79
0
65
30
3
1
63
1.22
94480472--94480512
18
2.4
17
88
8
57
36
9
0
53
1.34
94491600--94491763
46
3.7
45
92
5
271
58
12
15
12
1.63
94492661--94493384
75
9.6
72
79
11
631
33
16
19
29
1.94
94492645--94493111
75
6.3
74
85
6
642
33
17
19
29
1.95
94493031--94493199
90
1.9
90
90
2
268
40
14
15
28
1.87
94493152--94493385
74
3.2
72
82
7
263
30
16
20
32
1.95
94493866--94493909
18
2.4
18
92
0
79
68
13
4
13
1.36
94494771--94494822
15
3.5
15
80
17
63
36
7
1
53
1.41
94494860--94494914
21
2.6
21
79
0
65
30
3
1
63
1.22
94495219--94495257
16
2.4
16
87
8
53
35
10
0
53
1.35
94503112--94503227
25
4.6
25
97
0
214
28
31
12
26
1.93
94503099--94503227
50
2.6
50
92
3
217
28
30
12
28
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
94518819--94518867
25
1.9
26
95
4
91
42
12
12
32
1.79
94537969--94538002
14
2.4
14
85
14
52
73
14
11
0
1.10
94554431--94554458
14
2.0
14
100
0
56
71
0
0
28
0.86
94555159--94555233
14
5.4
14
75
0
69
33
9
24
33
1.87
94555137--94555229
42
2.2
41
82
3
105
33
10
23
32
1.89
94557585--94557635
20
2.6
19
85
11
68
33
9
1
54
1.44
94558372--94558553
96
1.9
96
94
0
319
33
13
16
36
1.87
94561997--94562420
139
3.1
136
75
9
392
32
21
7
38
1.81
94562024--94562421
140
2.9
137
77
7
410
31
21
7
39
1.81
94563059--94563083
1
25.0
1
100
0
50
100
0
0
0
0.00
94563254--94563292
19
2.1
19
95
0
69
33
20
23
23
1.97
94564600--94564624
2
12.5
2
100
0
50
52
0
0
48
1.00
94566208--94566236
12
2.4
12
100
0
58
20
6
17
55
1.65
94567797--94567830
17
2.0
17
94
0
59
32
23
14
29
1.94
94567907--94567966
26
2.3
26
88
0
84
31
11
13
43
1.80
94568116--94568149
6
5.7
6
92
0
59
17
26
0
55
1.42
94570919--94571010
47
2.0
47
97
0
175
31
16
13
39
1.86
94574386--94574477
46
2.0
46
84
0
121
25
14
16
44
1.85
94579182--94579277
40
2.5
39
80
10
115
37
35
12
14
1.84
94587535--94587574
20
2.0
20
100
0
80
45
5
25
25
1.73
94587536--94587582
20
2.3
20
92
3
76
44
6
23
25
1.77
94591053--94591173
42
2.8
43
80
12
117
24
16
27
31
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
94599283--94599325
19
2.3
18
85
14
61
41
0
0
58
0.98
94602460--94602667
54
3.9
53
80
6
215
25
25
15
33
1.95
94602460--94602667
53
3.9
52
80
7
213
25
25
15
33
1.95
94604332--94604364
14
2.4
14
89
0
57
48
21
12
18
1.80
94613579--94613702
27
4.6
27
88
0
194
42
21
5
29
1.76
94613579--94613802
81
2.8
80
78
5
227
39
20
8
31
1.83
94613579--94613837
27
9.6
27
77
2
173
38
20
8
31
1.83
94613821--94614207
27
14.3
27
86
3
444
37
18
19
24
1.94
94613823--94614203
81
4.7
80
87
3
496
37
18
19
24
1.94
94614542--94614601
27
2.3
27
85
2
77
21
23
20
35
1.96
94614720--94614912
6
31.3
6
73
16
155
18
18
15
48
1.81
94614723--94614891
25
6.8
25
82
8
147
17
18
15
47
1.82
94614748--94614830
37
2.2
37
89
0
130
18
19
16
45
1.85
94614720--94614891
62
2.8
62
94
0
299
18
18
15
48
1.82
94614754--94614886
19
6.8
19
75
19
130
17
19
15
47
1.83
94614810--94614903
37
2.5
37
91
0
143
18
19
13
48
1.80
94616370--94616406
14
2.6
14
95
0
65
24
16
13
45
1.83
94624465--94625019
206
2.7
206
90
0
851
30
17
21
29
1.96
94624982--94625064
43
1.9
44
87
2
123
30
14
26
28
1.95
94626624--94626675
26
2.1
26
85
7
72
46
5
0
48
1.26
94626618--94626706
25
3.6
25
76
15
80
43
4
0
51
1.21
94626685--94626786
19
5.0
19
73
20
66
34
4
0
60
1.18
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
94626717--94626783
24
2.8
24
83
2
80
35
2
0
61
1.12
94626779--94626847
28
2.5
28
83
4
86
31
4
4
59
1.37
94626799--94626846
16
3.2
16
69
19
50
29
4
2
64
1.23
94627397--94627426
16
1.9
15
93
6
51
33
6
16
43
1.74
94628556--94628690
67
2.0
67
98
0
261
37
24
10
27
1.88
94629961--94629989
14
2.1
14
100
0
58
79
0
20
0
0.74
94638448--94638472
13
1.9
13
100
0
50
56
16
12
16
1.68
94647308--94647452
19
7.9
19
89
9
239
37
10
15
37
1.81
94647308--94647459
35
4.2
38
87
11
239
37
9
15
36
1.81
94647308--94647452
54
2.7
54
97
1
272
37
10
15
37
1.81

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328