Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr07 97507971 
Parameters: 2 7 7 80 10 50 1000
Length:  97507971

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   

This is table  13  of  328  ( 39316 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3978978--3979041
15
4.4
14
70
18
51
68
1
4
25
1.17
3979072--3979113
22
2.0
22
90
4
68
59
7
0
33
1.25
3979168--3979197
12
2.4
12
94
5
51
76
6
10
6
1.15
3981153--3981292
71
2.0
72
88
4
212
20
26
18
34
1.96
3985138--3985199
15
3.8
16
74
17
56
1
33
0
64
1.03
3985343--3985392
20
2.5
20
81
15
59
10
10
8
72
1.30
3985929--3986032
52
2.0
52
98
0
199
38
8
15
37
1.78
3990915--3990965
25
2.0
25
85
14
70
47
0
9
43
1.36
3994150--3994246
36
2.7
36
90
3
142
26
21
19
31
1.97
3999814--4000200
78
5.0
78
96
0
693
40
23
19
16
1.91
3999830--4000114
42
7.2
42
60
15
140
41
24
18
15
1.90
4003845--4003877
2
16.5
2
100
0
66
48
0
0
51
1.00
4004868--4004934
14
4.7
14
87
3
89
38
8
16
35
1.80
4004868--4004934
29
2.4
28
94
2
116
38
8
16
35
1.80
4005025--4005066
22
1.9
22
100
0
84
50
0
0
50
1.00
4006489--4006530
21
2.0
21
86
9
59
52
16
0
30
1.44
4006499--4006564
25
3.0
21
75
16
78
54
15
1
28
1.50
4006538--4006598
32
1.9
32
86
0
86
57
16
1
24
1.48
4010888--4010921
17
2.1
16
88
5
50
64
0
2
32
1.08
4012995--4013029
18
1.9
18
88
11
54
51
2
0
45
1.16
4013365--4013406
17
2.5
17
88
0
57
21
14
2
61
1.43
4013359--4013411
17
3.2
16
81
7
54
20
13
1
64
1.38
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4019848--4019998
53
2.8
53
88
4
205
25
17
27
29
1.97
4030062--4030095
17
1.9
17
88
5
50
29
0
14
55
1.40
4034063--4034087
2
12.5
2
100
0
50
52
48
0
0
1.00
4040684--4040860
89
2.0
89
100
0
354
39
18
19
23
1.92
4044464--4044514
24
2.1
24
85
7
68
64
0
5
29
1.17
4044705--4044820
28
4.2
28
74
13
107
59
0
6
33
1.28
4044773--4044828
27
2.1
27
90
3
87
60
1
5
32
1.29
4045311--4045643
131
2.6
128
84
3
409
37
18
17
26
1.93
4046604--4046671
30
2.2
30
79
7
75
58
4
11
25
1.51
4046699--4046761
31
2.0
31
84
6
83
58
4
3
33
1.35
4047952--4047985
6
5.8
6
89
6
52
88
2
8
0
0.62
4047952--4047985
17
2.0
17
94
0
59
88
2
8
0
0.62
4051241--4051277
20
1.9
18
89
10
56
43
0
21
35
1.53
4053830--4053854
13
1.9
13
100
0
50
32
0
0
68
0.90
4058748--4058772
7
3.6
7
100
0
50
32
0
0
68
0.90
4065082--4065126
19
2.3
21
77
14
51
68
2
0
28
1.01
4066564--4066594
15
2.1
15
93
0
53
61
6
6
25
1.45
4069699--4069734
18
2.0
18
94
0
63
36
25
5
33
1.79
4071480--4071522
18
2.4
18
88
0
59
20
25
9
44
1.81
4072538--4072610
27
2.7
27
82
4
85
61
6
4
27
1.40
4073237--4073299
23
2.7
23
80
4
56
60
1
6
31
1.31
4077880--4078244
127
2.9
126
86
3
520
28
16
16
38
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4078303--4078424
34
3.5
34
77
5
129
45
11
1
41
1.50
4078520--4078559
15
2.7
15
88
0
53
57
32
0
10
1.32
4078462--4078540
42
1.9
42
92
2
133
49
24
2
24
1.63
4080519--4080547
3
9.7
3
100
0
58
65
0
0
34
0.93
4081252--4081295
17
2.6
17
76
16
56
81
0
6
11
0.86
4081522--4081553
2
16.0
2
100
0
64
50
0
0
50
1.00
4088967--4089014
3
16.0
3
100
0
96
33
0
0
66
0.92
4092642--4092701
17
3.5
17
75
11
52
53
1
3
41
1.27
4093414--4093468
23
2.2
26
75
21
64
23
0
7
69
1.14
4093458--4093514
16
3.4
16
71
15
53
26
1
1
70
1.07
4093409--4093530
34
3.5
35
74
17
96
29
1
4
64
1.21
4095815--4095862
20
2.2
21
82
10
62
20
0
8
70
1.12
4095836--4095875
17
2.3
18
82
4
55
17
0
5
77
0.94
4095862--4095918
17
3.4
17
73
11
55
31
1
1
64
1.13
4095840--4095926
42
2.1
42
82
8
106
29
1
3
65
1.16
4097946--4098272
50
6.5
50
92
0
528
34
15
22
27
1.94
4098252--4098310
31
1.9
31
100
0
118
28
20
25
25
1.99
4098265--4098356
46
2.0
46
89
0
139
26
22
23
27
2.00
4098312--4098372
31
2.0
31
83
0
77
27
18
26
27
1.98
4101686--4101719
11
3.2
10
88
12
50
20
0
2
76
0.92
4104051--4104151
47
2.1
50
85
10
138
52
2
1
42
1.28
4108611--4108669
3
19.0
3
81
16
59
62
5
0
32
1.17
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4108742--4108816
3
24.3
3
72
20
50
64
1
4
30
1.20
4108738--4108824
18
4.7
18
79
12
88
65
1
3
29
1.16
4108809--4108834
8
3.2
8
100
0
52
88
0
0
11
0.52
4109898--4110307
87
4.8
86
80
10
473
19
21
20
38
1.94
4109900--4110610
44
16.5
44
68
9
275
18
23
21
36
1.95
4109900--4110438
131
4.2
129
76
10
512
18
23
21
36
1.95
4110280--4110610
87
3.8
87
90
0
520
18
24
22
34
1.96
4112808--4112835
3
9.3
3
100
0
56
67
0
0
32
0.91
4113031--4113057
3
9.0
3
100
0
54
66
0
0
33
0.92
4113164--4113247
3
27.3
3
75
17
68
64
1
3
30
1.18
4113160--4113256
33
3.0
30
74
18
88
65
1
3
29
1.14
4113169--4113247
18
4.2
18
80
12
79
64
1
3
30
1.19
4113164--4113246
27
3.2
26
73
20
84
63
1
3
31
1.19
4113169--4113256
18
4.7
19
75
10
74
67
1
3
28
1.14
4113171--4113257
12
7.0
12
71
15
61
67
1
3
27
1.13
4114109--4114142
14
2.5
14
95
4
61
35
26
11
26
1.91
4116043--4116193
53
2.8
53
88
6
198
30
27
15
25
1.96
4118467--4118520
16
3.5
15
83
14
65
5
12
1
79
0.98
4120273--4120297
4
6.2
4
100
0
50
76
0
0
24
0.80
4124262--4124315
9
5.8
9
85
8
72
37
0
0
62
0.95
4124258--4124316
18
3.1
19
85
7
84
40
0
0
59
0.97
4125088--4125122
17
2.0
18
88
5
54
42
0
2
54
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4125298--4125348
22
2.4
22
78
15
61
64
3
3
27
1.28
4127791--4127829
18
2.2
18
100
0
78
61
0
15
23
1.33
4131694--4131745
15
3.2
15
73
26
52
65
0
0
34
0.93
4131694--4131745
18
3.2
16
75
21
54
65
0
0
34
0.93
4141149--4141293
10
14.7
10
68
19
65
38
0
2
58
1.12
4141162--4141261
39
2.6
37
79
16
105
42
0
2
56
1.11
4141208--4141382
91
1.9
94
82
5
223
35
1
4
58
1.26
4147483--4147532
26
2.0
25
92
4
82
38
0
4
58
1.17
4147486--4147546
26
2.4
25
81
5
68
39
1
4
54
1.32
4150274--4150491
107
2.0
107
99
0
427
34
14
14
36
1.87
4152843--4152890
24
2.0
24
84
8
62
39
2
0
58
1.10
4160030--4160087
27
2.1
27
81
12
66
51
1
3
43
1.28
4170973--4170998
3
8.7
3
100
0
52
30
0
0
69
0.89
4173328--4173394
29
2.2
29
84
5
80
53
8
8
28
1.62
4175749--4175787
3
13.0
3
100
0
78
33
0
0
66
0.92
4175916--4175953
8
4.9
8
83
6
51
36
0
7
55
1.29
4176171--4176208
20
2.0
20
89
5
60
28
2
10
57
1.45
4178317--4178352
12
3.0
12
87
0
54
30
22
2
44
1.67
4183407--4183437
16
1.9
16
93
0
53
16
12
6
64
1.47
4183347--4183599
89
2.8
89
87
3
375
26
16
20
36
1.93
4183495--4183529
14
2.5
14
100
0
70
17
20
5
57
1.60
4183423--4184406
163
5.9
163
76
13
869
28
17
20
34
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4183510--4183795
75
3.8
75
84
10
384
29
16
21
32
1.95
4183423--4183795
156
2.3
160
90
5
569
28
16
21
33
1.95
4183741--4183903
54
3.0
53
92
3
263
27
14
18
39
1.89
4184016--4184339
75
4.1
75
79
11
362
28
18
20
32
1.96
4184370--4184623
54
4.7
54
97
1
474
29
14
18
36
1.92
4184370--4184619
107
2.3
109
97
2
468
30
14
18
36
1.91
4186371--4186403
3
11.0
3
100
0
66
33
0
0
66
0.92
4186778--4186815
20
2.0
20
89
5
60
28
2
10
57
1.45
4188863--4188932
22
3.2
22
83
2
79
65
11
15
7
1.45
4188897--4188946
21
2.4
21
82
0
64
66
8
14
12
1.45

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328