Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr07 97507971 
Parameters: 2 7 7 80 10 50 1000
Length:  97507971

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   

This is table  307  of  328  ( 39316 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91286079--91286303
67
3.3
68
88
6
332
26
7
17
48
1.73
91286261--91286343
28
2.9
28
68
18
71
28
6
14
50
1.66
91287156--91287212
29
2.0
28
89
3
87
1
31
0
66
1.02
91287841--91287923
27
3.0
28
75
10
89
32
8
19
39
1.81
91288188--91288405
89
2.5
83
83
6
249
27
5
11
55
1.58
91290599--91290638
20
2.0
20
90
0
62
27
10
40
22
1.86
91290969--91291107
17
8.1
17
68
16
54
25
13
4
56
1.55
91291110--91291336
114
2.0
113
87
6
323
23
13
6
56
1.59
91291213--91291474
132
2.0
131
85
4
357
24
11
4
59
1.51
91291751--91291791
17
2.5
17
88
4
57
24
14
2
58
1.49
91292064--91292138
6
12.7
6
74
5
64
34
14
2
48
1.58
91305421--91305611
82
2.3
82
94
2
328
20
7
27
45
1.77
91308988--91309020
17
1.9
17
88
11
50
69
0
0
30
0.88
91308988--91309021
18
1.9
17
88
5
50
70
0
0
29
0.87
91309307--91309385
35
2.2
37
86
13
121
35
16
10
37
1.82
91309328--91309383
17
3.5
15
88
9
60
35
16
10
37
1.83
91309314--91309385
19
3.9
19
89
10
123
36
15
11
37
1.83
91310538--91310598
22
2.6
23
79
10
61
45
3
3
47
1.35
91310538--91310584
23
2.0
24
84
8
62
44
4
2
48
1.34
91311564--91311592
11
2.5
12
94
5
51
24
17
0
58
1.38
91311754--91311823
29
2.5
27
76
15
70
30
2
1
65
1.15
91314107--91314152
13
3.5
13
75
0
56
30
8
21
39
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91314107--91314159
13
4.1
13
76
9
54
32
7
24
35
1.84
91314110--91314169
26
2.4
25
77
8
68
38
5
20
36
1.74
91314394--91314444
20
2.4
21
81
15
61
50
1
1
45
1.24
91314394--91314446
21
2.5
21
82
14
65
49
1
1
47
1.23
91314436--91314506
11
5.9
13
68
25
50
40
0
5
53
1.24
91314423--91314508
35
2.5
35
94
0
145
40
0
4
54
1.21
91321810--91321872
33
1.9
33
100
0
126
34
19
20
25
1.96
91322152--91322287
26
5.2
26
94
0
236
33
5
25
36
1.78
91324061--91324620
137
4.1
137
96
0
1023
25
18
24
31
1.97
91325824--91325961
40
3.5
40
80
6
156
30
23
18
26
1.98
91330474--91330620
43
3.4
43
76
10
147
29
25
16
29
1.97
91349886--91349925
13
3.2
13
89
10
57
82
0
0
17
0.67
91349886--91349925
12
3.2
12
89
10
55
82
0
0
17
0.67
91354940--91354981
19
2.2
19
95
0
75
42
16
14
26
1.86
91355457--91355498
20
2.1
20
90
0
66
23
33
9
33
1.87
91356153--91356209
27
2.0
31
83
13
77
36
3
0
59
1.14
91357885--91357935
26
1.9
27
84
11
70
23
1
5
68
1.22
91368811--91368846
18
1.9
19
94
5
65
69
0
30
0
0.89
91373222--91373288
27
2.7
23
73
20
64
62
4
4
28
1.34
91373239--91373408
26
6.5
27
68
18
83
63
7
6
22
1.43
91373332--91373401
24
2.8
25
81
12
65
65
5
7
21
1.38
91373352--91373401
25
2.0
26
92
4
84
64
8
6
22
1.43
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91373349--91373408
26
2.4
25
85
2
84
65
6
5
23
1.37
91373771--91373866
44
2.2
44
86
3
131
59
7
7
26
1.50
91373786--91373875
44
2.0
44
97
0
171
56
8
7
26
1.57
91374776--91374813
19
2.0
19
85
10
51
81
0
5
13
0.85
91375079--91375108
7
4.3
7
91
0
51
3
0
40
56
1.16
91378125--91378153
8
3.6
8
100
0
58
37
0
0
62
0.96
91378176--91378211
5
7.4
5
93
6
65
41
0
0
58
0.98
91379334--91379376
21
2.0
21
100
0
86
32
4
16
46
1.67
91379408--91379464
15
3.9
15
88
2
89
35
0
12
52
1.39
91379845--91379905
21
2.8
23
85
14
94
13
24
27
34
1.93
91383632--91383660
8
3.6
8
100
0
58
37
0
0
62
0.96
91383683--91383713
5
6.4
5
92
7
55
41
0
0
58
0.98
91386003--91386221
50
4.4
49
67
16
155
26
5
7
59
1.47
91385666--91386476
151
5.5
149
87
6
1120
26
6
8
58
1.51
91386247--91386321
30
2.8
25
77
22
82
22
6
5
65
1.37
91385664--91386476
301
2.7
293
86
8
1139
26
6
8
58
1.51
91386910--91386965
27
2.1
27
87
12
80
50
10
0
39
1.37
91386994--91387037
20
2.3
19
80
4
52
0
27
0
72
0.85
91387008--91387032
6
4.2
6
100
0
50
0
16
0
84
0.63
91387265--91387300
19
1.9
18
88
5
54
16
11
2
69
1.29
91387756--91387796
16
2.6
17
77
14
52
17
0
26
56
1.41
91388513--91388751
127
1.9
127
84
1
327
36
17
16
29
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91391132--91391303
47
3.6
47
80
5
168
30
27
16
25
1.97
91391150--91391343
47
4.0
49
78
10
184
29
28
16
24
1.97
91391214--91391357
53
2.8
53
81
8
140
29
27
15
27
1.96
91396559--91396601
7
6.0
7
91
2
68
58
13
2
25
1.48
91396546--91396597
21
2.5
21
73
17
54
55
13
3
26
1.55
91397222--91397260
15
2.6
15
95
0
69
12
35
35
15
1.86
91397576--91397711
48
2.8
49
83
9
138
54
5
9
30
1.55
91397600--91397711
48
2.3
47
89
6
163
50
4
8
35
1.54
91401981--91402188
69
3.0
69
85
2
265
45
22
7
25
1.78
91410206--91410232
13
2.1
13
100
0
54
22
7
14
55
1.64
91419500--91419527
3
9.3
3
100
0
56
67
0
32
0
0.91
91423011--91423056
21
2.2
21
96
0
83
34
28
17
19
1.94
91423085--91423154
31
2.3
31
80
7
90
24
7
17
51
1.70
91425825--91425867
14
3.1
14
83
10
52
9
2
4
83
0.87
91425871--91425901
5
6.2
5
100
0
62
61
0
0
38
0.96
91426413--91426452
19
2.0
20
85
4
55
32
22
5
40
1.76
91429530--91429556
6
4.5
6
100
0
54
33
0
66
0
0.92
91430979--91431026
19
2.5
19
89
3
69
64
4
0
31
1.12
91430979--91431031
20
2.7
20
88
5
72
62
3
0
33
1.13
91431050--91431092
15
2.8
15
82
3
59
41
2
0
55
1.12
91432986--91433010
11
2.3
11
100
0
50
92
0
8
0
0.40
91437054--91437182
39
3.3
39
86
2
170
27
28
24
19
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91439800--91439877
2
39.0
2
100
0
156
50
50
0
0
1.00
91440023--91440072
26
1.9
26
84
15
68
40
22
10
28
1.86
91442536--91442664
39
3.3
39
85
2
161
27
28
24
19
1.98
91445201--91445329
51
2.6
50
82
3
152
34
22
13
29
1.92
91445205--91445344
51
2.8
51
79
7
151
35
22
13
28
1.92
91452820--91453043
68
3.2
68
87
4
263
34
16
27
20
1.95
91454770--91454841
36
2.0
36
100
0
144
36
19
11
33
1.87
91456979--91457004
9
2.9
9
100
0
52
11
0
0
88
0.52
91456979--91457017
18
2.0
19
85
14
53
10
5
2
82
0.93
91457396--91457429
16
2.1
17
88
5
52
73
2
0
23
0.97
91458197--91458225
14
2.1
14
100
0
58
20
20
13
44
1.85
91467774--91467855
35
2.4
34
81
6
94
30
3
1
64
1.18
91468349--91468381
17
2.0
17
88
5
50
42
6
0
51
1.26
91469912--91469946
3
11.7
3
100
0
70
68
0
31
0
0.90
91492669--91492701
16
2.0
17
88
5
50
45
0
0
54
0.99
91493922--91493981
27
2.2
28
84
3
77
31
11
10
46
1.73
91494566--91494703
73
1.9
73
96
0
258
23
18
31
26
1.97
91496735--91496780
23
2.0
23
84
12
60
45
10
6
36
1.65
91496742--91496786
23
2.0
23
82
8
56
40
13
8
37
1.76
91502703--91502769
28
2.4
28
84
0
80
29
14
23
31
1.95
91504948--91504977
9
3.3
9
90
0
51
36
10
6
46
1.64
91505410--91505436
7
3.9
7
100
0
54
14
0
0
85
0.61
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91506517--91506566
11
4.6
11
75
20
52
50
0
0
50
1.00
91506885--91506945
26
2.5
25
82
12
65
31
0
1
67
1.01
91506980--91507046
27
2.5
27
82
0
80
17
26
25
29
1.98
91507428--91507465
19
2.0
19
94
0
67
47
13
10
28
1.76
91508452--91508516
27
2.3
27
84
5
76
61
4
0
33
1.16
91509593--91509631
21
1.9
20
84
5
51
28
23
7
41
1.82
91512332--91512371
21
1.9
21
84
0
53
22
10
35
32
1.87
91521105--91521138
17
1.9
17
94
5
59
70
0
17
11
1.16
91522414--91522474
30
2.0
31
90
6
99
21
42
0
36
1.53
91526799--91526919
60
2.0
60
100
0
242
42
14
4
37
1.68

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328