Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr07 97507971 
Parameters: 2 7 7 80 10 50 1000
Length:  97507971

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   

This is table  148  of  328  ( 39316 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43311152--43311181
15
2.0
15
93
0
51
30
0
0
70
0.88
43313105--43313162
22
2.5
22
83
10
64
65
6
1
25
1.27
43313215--43313303
26
3.4
27
84
3
101
60
6
2
30
1.34
43313364--43313436
25
2.8
25
70
12
58
63
2
4
30
1.27
43313364--43313555
26
7.4
26
73
9
110
61
4
4
28
1.36
43313485--43313554
27
2.6
25
80
12
77
62
1
4
31
1.23
43313485--43313554
14
5.1
14
68
13
56
62
1
4
31
1.23
43313399--43313562
26
6.2
26
74
5
123
61
5
4
28
1.39
43313649--43313673
2
12.5
2
100
0
50
52
0
0
48
1.00
43315302--43316477
44
26.1
44
68
13
403
28
20
19
31
1.97
43315302--43315523
89
2.5
88
81
4
275
29
21
17
31
1.96
43315302--43315570
133
2.0
133
85
2
362
29
20
18
31
1.97
43315356--43315802
133
3.3
132
74
14
385
28
21
19
31
1.97
43315455--43316533
227
4.8
227
89
0
1570
28
20
19
31
1.97
43315451--43316533
453
2.4
453
89
1
1632
28
20
19
31
1.97
43317447--43317502
28
2.0
28
100
0
112
53
7
21
17
1.67
43322244--43322272
2
14.5
2
100
0
58
51
0
0
48
1.00
43322334--43322362
2
14.5
2
100
0
58
51
0
0
48
1.00
43325097--43325136
2
20.0
2
100
0
80
50
0
50
0
1.00
43326017--43326063
20
2.3
20
81
0
58
34
6
8
51
1.58
43326546--43326624
39
2.0
40
82
5
97
25
21
22
30
1.99
43326927--43327065
7
18.9
7
71
10
71
23
0
29
47
1.52
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43327000--43327063
14
4.4
14
88
5
83
20
0
34
45
1.51
43326995--43327063
15
4.7
14
85
7
84
20
0
33
46
1.51
43327085--43327118
7
4.7
7
85
7
50
26
2
29
41
1.70
43327085--43327118
15
2.4
14
90
5
50
26
2
29
41
1.70
43327176--43327222
15
3.2
15
88
11
71
25
4
42
27
1.73
43327169--43327264
7
13.1
7
72
15
70
28
4
38
29
1.75
43327187--43327296
58
1.9
58
83
3
141
24
2
39
33
1.70
43327617--43327650
17
1.9
17
88
5
50
29
0
2
67
1.05
43328677--43328707
2
15.5
2
100
0
62
48
0
0
51
1.00
43332852--43333102
86
2.8
88
89
4
389
35
7
3
53
1.46
43333246--43333336
9
9.9
9
73
15
62
48
14
1
36
1.51
43335529--43335750
124
1.8
122
83
3
293
31
11
23
32
1.91
43335709--43335859
40
3.8
40
77
11
141
26
24
27
21
2.00
43335746--43335875
40
3.2
40
79
2
154
23
23
28
23
2.00
43335708--43335875
80
2.1
80
82
6
207
26
23
27
22
2.00
43341569--43341597
13
2.1
14
93
6
51
31
0
6
62
1.22
43342015--43342069
21
2.6
21
77
11
67
30
16
49
3
1.63
43342015--43342080
21
3.1
21
77
12
55
30
16
48
4
1.66
43342469--43342637
43
4.0
42
80
3
178
27
20
17
34
1.95
43342469--43342627
85
1.9
85
83
0
210
27
21
18
32
1.96
43345966--43346128
46
3.5
46
81
10
165
28
15
28
26
1.96
43346101--43346223
50
2.5
49
78
13
128
26
17
32
23
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43350483--43350516
2
17.0
2
100
0
68
50
0
0
50
1.00
43351645--43351678
17
2.0
17
100
0
68
23
5
17
52
1.66
43353565--43353626
20
3.1
20
77
9
63
33
9
9
46
1.69
43359590--43359641
24
2.2
24
92
0
86
34
17
7
40
1.78
43359590--43359650
24
2.5
24
86
5
70
37
16
6
39
1.75
43364728--43364772
22
2.0
22
83
8
56
40
4
2
53
1.33
43374498--43374553
16
3.4
16
74
18
53
48
3
0
48
1.19
43382823--43383014
39
4.9
39
92
0
312
25
22
30
21
1.99
43387484--43387525
18
2.4
17
81
18
50
28
4
0
66
1.12
43387841--43387875
17
2.1
17
100
0
70
22
11
22
42
1.85
43389413--43389482
33
2.1
33
86
5
97
34
24
17
24
1.96
43397918--43398012
49
1.9
49
93
0
163
23
24
7
45
1.78
43401256--43401296
21
2.0
21
85
0
55
41
2
21
34
1.67
43402507--43402542
18
1.9
19
94
5
65
22
25
0
52
1.47
43402517--43402603
43
2.0
43
86
0
120
19
21
3
55
1.58
43403525--43403553
12
2.3
13
94
5
51
0
24
0
75
0.80
43403620--43403656
3
12.3
3
94
0
65
35
2
0
62
1.10
43414897--43414949
5
9.6
5
77
18
52
79
3
1
15
0.96
43414897--43414949
18
3.2
15
75
19
52
79
3
1
15
0.96
43414897--43414945
12
4.2
12
75
19
50
79
4
2
14
0.97
43414895--43414949
23
2.4
24
82
11
71
78
3
3
14
1.03
43416826--43416854
12
2.3
13
94
5
51
68
0
31
0
0.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43430296--43430340
22
2.0
22
95
0
81
62
6
13
17
1.52
43433286--43433361
34
2.2
33
86
9
100
25
23
22
28
1.99
43436566--43436645
28
2.9
28
96
0
142
25
28
3
42
1.72
43443130--43443301
46
3.8
45
81
11
176
26
18
30
25
1.98
43443273--43443405
50
2.7
50
91
0
221
30
18
25
26
1.98
43447541--43447592
21
2.5
21
81
9
63
34
1
17
46
1.59
43448630--43448680
26
2.0
26
84
0
66
39
3
11
45
1.59
43454494--43454526
17
1.9
17
93
0
57
39
21
18
21
1.93
43458024--43458191
61
2.8
59
84
5
198
53
2
1
42
1.23
43458087--43458179
29
3.3
26
68
25
71
51
3
0
45
1.17
43460533--43460562
14
2.1
14
100
0
60
6
40
0
53
1.27
43466993--43467115
65
1.9
65
93
0
210
44
15
21
18
1.86
43467391--43467445
3
18.3
3
100
0
110
67
0
0
32
0.91
43474942--43475131
41
4.7
41
94
0
310
34
24
21
20
1.97
43475348--43475394
14
3.3
14
79
8
51
17
0
34
48
1.47
43475377--43475424
21
2.2
23
77
11
55
18
4
35
41
1.70
43475386--43475433
21
2.2
23
92
7
82
18
4
37
39
1.70
43476382--43476415
13
2.6
13
95
0
59
35
38
0
26
1.57
43476444--43476473
14
2.1
14
93
0
51
43
40
3
13
1.60
43476541--43476570
14
2.1
14
100
0
60
26
36
0
36
1.57
43479696--43479748
22
2.4
23
81
12
67
28
5
20
45
1.74
43480600--43480635
10
3.6
10
96
0
63
36
2
0
61
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43480658--43480839
43
4.2
43
85
4
224
24
19
31
25
1.98
43480658--43480843
87
2.2
86
83
4
232
24
18
30
26
1.98
43480973--43480997
12
2.1
12
100
0
50
48
0
0
52
1.00
43484615--43484654
21
2.0
20
90
5
62
17
30
42
10
1.82
43486031--43486153
47
2.6
45
81
12
142
24
29
17
28
1.98
43493153--43493255
29
3.6
29
78
2
100
20
17
33
28
1.95
43495464--43495644
46
4.0
43
77
12
134
22
27
19
31
1.97
43495464--43495599
45
3.0
44
80
11
141
22
27
19
30
1.97
43495379--43495647
94
2.8
92
77
14
262
24
28
17
29
1.97
43504480--43504994
259
2.0
259
91
0
843
26
20
15
37
1.92
43506857--43506888
16
2.1
15
94
5
55
31
31
12
25
1.92
43507957--43508013
30
1.9
30
85
7
80
14
29
31
24
1.94
43509331--43509381
24
2.1
24
85
3
66
47
17
15
19
1.83
43509331--43509397
24
2.8
24
76
2
62
46
16
17
19
1.85
43509460--43509508
25
2.0
25
88
8
73
34
20
22
22
1.97
43510432--43510519
44
2.0
44
95
0
158
37
4
20
37
1.73
43515651--43515677
9
3.0
9
100
0
54
22
0
0
77
0.76
43519281--43519410
40
3.3
39
76
8
136
23
27
23
24
2.00
43519297--43519448
40
3.8
40
78
6
148
22
26
23
27
1.99
43519297--43519446
80
1.9
80
83
8
198
22
26
24
27
1.99
43527283--43527412
40
3.3
39
76
8
136
23
27
23
24
2.00
43527299--43527450
40
3.8
40
78
6
148
22
26
23
27
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43527299--43527448
80
1.9
80
83
8
198
22
26
24
27
1.99
43533594--43534599
503
2.0
502
96
0
1870
32
22
12
31
1.92
43534521--43534701
49
3.7
48
77
10
181
23
25
20
30
1.99
43534471--43534745
97
2.9
95
79
8
263
24
25
19
30
1.98
43534521--43534745
49
4.7
46
75
10
150
23
25
20
30
1.98
43536662--43536735
10
7.4
10
70
21
57
21
2
1
74
1.02
43536665--43536744
25
3.3
23
78
16
74
21
2
1
75
1.00
43536688--43536747
20
3.0
20
87
7
86
21
0
3
75
0.95
43536696--43536739
7
6.4
7
82
15
56
22
0
2
75
0.92
43536691--43536744
12
4.2
12
78
17
56
22
0
1
75
0.89

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328