Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr07 97507971 
Parameters: 2 7 7 80 10 50 1000
Length:  97507971

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   

This is table  120  of  328  ( 39316 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34196114--34196308
20
9.8
20
65
8
74
15
30
16
37
1.90
34199237--34199346
26
4.2
26
91
0
175
35
24
6
33
1.81
34203957--34203991
17
2.1
16
94
5
61
28
2
37
31
1.72
34203922--34204026
52
2.0
51
94
1
183
28
8
29
33
1.87
34203976--34204108
40
3.6
37
81
11
148
33
11
22
32
1.90
34203976--34204105
35
3.5
36
82
11
147
33
10
23
32
1.89
34204037--34204107
36
2.0
35
88
2
106
33
14
21
30
1.92
34211437--34211607
75
2.4
75
84
7
212
32
11
23
33
1.90
34211440--34211605
35
4.6
35
84
8
174
31
11
23
33
1.90
34216175--34216384
40
5.2
40
88
2
305
21
28
24
25
1.99
34224307--34224516
40
5.2
40
88
2
305
21
28
24
25
1.99
34228294--34228331
15
2.3
18
73
26
55
36
7
5
50
1.54
34228298--34228331
15
2.3
15
100
0
68
35
5
5
52
1.50
34249880--34249935
28
2.0
28
82
10
69
23
42
16
17
1.88
34250248--34250305
30
1.9
30
92
0
98
58
25
3
12
1.49
34256369--34256402
6
5.7
6
92
0
59
14
14
17
52
1.74
34256812--34256862
22
2.3
22
80
6
59
5
13
1
78
1.02
34256825--34256870
22
2.1
22
83
0
56
8
13
2
76
1.11
34258703--34258734
16
2.0
16
93
0
55
25
28
25
21
1.99
34259007--34259044
18
2.1
19
85
5
51
23
10
26
39
1.87
34260131--34260179
20
2.5
20
93
0
80
36
2
0
61
1.08
34260131--34260190
20
3.0
19
83
9
57
41
1
0
56
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34260273--34260326
19
2.8
18
83
10
63
22
1
5
70
1.18
34268941--34268976
17
2.2
17
90
5
56
44
5
0
50
1.25
34269941--34270083
42
3.4
42
82
2
153
27
23
16
33
1.95
34276067--34276148
22
3.7
23
73
11
80
57
1
0
41
1.06
34276195--34276248
17
3.3
17
68
19
51
40
0
5
53
1.24
34276161--34276269
32
3.2
33
75
11
114
43
1
3
51
1.30
34283237--34283289
21
2.5
22
76
11
56
32
18
7
41
1.79
34284314--34284352
20
1.9
20
85
15
53
38
15
2
43
1.60
34295303--34295364
28
2.1
28
91
5
97
41
1
6
50
1.38
34296673--34296810
39
3.5
39
84
0
186
38
10
14
36
1.80
34296671--34296736
18
3.5
18
70
11
60
40
4
15
39
1.67
34303029--34303057
13
2.2
13
100
0
58
55
13
0
31
1.39
34304944--34304981
19
2.0
20
85
15
53
39
23
0
36
1.55
34305209--34305379
93
1.8
93
93
0
297
28
28
21
21
1.98
34305204--34305376
46
3.7
46
79
10
208
29
27
20
21
1.98
34312506--34312543
19
2.0
20
85
15
53
39
23
0
36
1.55
34312768--34312940
46
3.8
49
78
16
174
28
28
20
21
1.98
34312773--34312940
93
1.8
90
92
3
282
28
29
20
21
1.98
34315532--34315706
47
3.7
50
78
15
178
28
28
21
21
1.99
34315537--34315706
94
1.8
91
92
3
286
28
29
21
21
1.98
34322826--34322863
19
2.0
20
85
15
53
39
23
0
36
1.55
34323092--34323261
93
1.8
92
93
1
295
28
28
20
21
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34323087--34323258
45
3.7
46
79
11
208
29
27
20
22
1.98
34327607--34327768
38
4.3
38
91
1
227
20
21
25
32
1.98
34327761--34327880
44
2.7
45
85
5
163
21
24
27
26
1.99
34328846--34328872
6
4.5
6
100
0
54
85
0
0
14
0.61
34334305--34334333
13
2.2
13
100
0
58
55
13
0
31
1.39
34335578--34335639
28
2.1
28
91
5
97
41
1
6
50
1.38
34336919--34336957
15
2.7
14
88
7
60
43
2
0
53
1.14
34340934--34341100
40
4.2
40
79
6
169
26
22
26
24
2.00
34348944--34349110
40
4.2
40
79
6
169
26
22
26
24
2.00
34368329--34368376
24
2.0
24
84
4
62
29
43
2
25
1.66
34371444--34371477
2
17.0
2
100
0
68
50
0
0
50
1.00
34372081--34372186
42
2.5
43
73
13
103
33
24
16
26
1.96
34377082--34377146
28
2.3
28
86
0
94
38
9
23
29
1.85
34377219--34377478
39
6.7
39
94
3
427
18
21
30
29
1.97
34383598--34383662
28
2.3
28
86
0
94
38
9
23
29
1.85
34383735--34383996
39
6.7
39
90
2
366
18
21
29
30
1.97
34393606--34393645
5
8.4
5
86
10
57
82
0
2
15
0.77
34393606--34393645
9
4.2
10
81
12
57
82
0
2
15
0.77
34398962--34398993
16
2.0
16
100
0
64
31
18
6
43
1.75
34405757--34405918
26
6.2
26
91
1
254
35
24
6
33
1.80
34405757--34405918
78
2.1
78
95
0
288
35
24
6
33
1.80
34410495--34410531
2
18.5
2
94
0
65
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34410608--34410654
2
23.5
2
100
0
94
48
0
0
51
1.00
34416524--34416605
41
2.0
41
92
0
137
47
19
8
24
1.77
34421343--34421368
12
2.2
12
100
0
52
42
0
15
42
1.47
34422446--34422621
43
3.8
44
74
12
140
26
18
28
26
1.98
34422450--34422621
97
1.8
92
81
10
213
26
18
28
26
1.98
34422541--34422633
49
1.9
48
82
2
114
27
18
25
27
1.98
34430270--34430441
93
1.8
93
85
7
242
27
18
29
25
1.98
34430225--34430490
49
5.6
48
76
11
208
29
17
28
24
1.97
34432195--34432242
25
1.9
25
100
0
96
31
4
27
37
1.76
34434610--34434734
27
4.6
27
79
0
124
17
20
21
40
1.92
34434693--34434749
27
2.1
27
80
6
62
21
12
21
45
1.83
34443655--34443680
6
4.3
6
100
0
52
19
19
15
46
1.85
34448368--34448400
16
2.1
16
94
0
57
30
6
33
30
1.82
34450622--34450764
35
4.1
35
89
0
214
37
16
10
35
1.83
34450609--34450769
70
2.2
73
87
5
247
36
16
10
36
1.83
34457437--34457498
31
2.0
31
100
0
124
38
12
32
16
1.86
34459309--34459397
42
2.1
42
93
0
151
28
21
15
34
1.94
34461923--34461960
19
2.0
19
85
10
51
23
10
0
65
1.23
34468684--34468723
9
4.6
9
87
3
55
52
7
2
37
1.43
34475264--34475344
42
1.9
42
97
0
153
40
11
18
29
1.85
34478152--34478181
11
2.7
11
94
0
51
50
13
0
36
1.42
34483387--34483431
21
2.1
21
84
8
56
64
2
4
28
1.25
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34487651--34487711
28
2.2
27
82
8
70
44
4
4
45
1.46
34489416--34489452
6
6.2
6
100
0
74
67
0
16
16
1.23
34489441--34489482
18
2.4
18
96
4
77
54
11
16
16
1.70
34491544--34491831
137
2.1
137
94
0
513
31
25
18
24
1.97
34492111--34492171
28
2.3
27
82
5
70
31
9
19
39
1.84
34493620--34493781
26
6.2
26
96
1
290
38
23
4
33
1.75
34496258--34496292
18
1.9
18
94
0
61
40
2
0
57
1.14
34496737--34496799
21
3.0
21
100
0
126
47
19
9
23
1.78
34500573--34500620
17
2.9
17
90
3
80
39
45
4
10
1.58
34500997--34501027
16
1.9
16
93
0
53
3
16
0
80
0.83
34501128--34501161
10
3.4
10
100
0
68
0
29
58
11
1.33
34501895--34502146
3
86.0
3
66
21
99
29
7
1
62
1.29
34501958--34502068
20
5.3
22
75
22
98
31
4
0
63
1.21
34502682--34502735
23
2.3
23
84
12
65
35
16
3
44
1.66
34502798--34502832
11
3.2
11
91
0
61
8
17
20
54
1.68
34518167--34518320
79
1.9
81
94
2
276
27
18
22
31
1.97
34518140--34518471
178
1.8
183
82
10
437
28
16
18
36
1.93
34518410--34518435
13
2.0
13
100
0
52
23
0
7
69
1.14
34518418--34518528
54
2.1
54
96
0
204
28
11
18
41
1.85
34518547--34518576
13
2.3
13
94
0
51
10
13
10
66
1.44
34518347--34518636
142
2.1
140
88
2
420
27
14
17
39
1.90
34518487--34518806
169
1.9
167
86
5
455
28
16
16
37
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34518744--34518921
61
3.1
55
85
10
250
32
14
16
35
1.90
34519598--34519634
17
2.2
17
95
0
65
43
43
2
10
1.53
34521397--34521604
40
5.2
40
84
4
233
25
22
26
25
2.00
34529500--34529707
40
5.2
40
84
4
233
25
22
26
25
2.00
34531427--34531457
16
1.9
16
93
0
53
3
16
0
80
0.83
34532296--34532574
3
94.0
3
68
20
142
30
6
1
61
1.30
34533048--34533078
11
2.7
11
95
5
53
38
0
6
54
1.26
34533104--34533156
25
2.2
24
83
12
65
35
18
3
41
1.69
34533220--34533254
11
3.2
11
91
0
61
8
17
20
54
1.68
34534628--34534662
16
2.2
16
94
0
61
60
0
40
0
0.97

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328