Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr07 97507971 
Parameters: 2 7 7 80 10 50 1000
Length:  97507971

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   

This is table  129  of  328  ( 39316 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37285165--37285331
24
7.0
24
91
2
248
28
22
22
26
1.99
37292998--37293067
31
2.3
31
97
2
133
27
31
14
27
1.95
37293416--37293582
40
4.2
40
82
2
176
25
26
21
26
1.99
37296413--37296463
20
2.5
20
93
0
84
35
11
21
31
1.90
37296508--37296698
24
8.0
24
90
4
280
28
22
21
27
1.99
37296508--37296677
47
3.6
47
93
1
295
28
22
20
28
1.99
37296508--37296684
95
1.9
96
95
1
320
28
22
21
27
1.99
37308952--37309081
43
2.9
47
80
6
126
28
24
17
29
1.97
37309009--37309481
43
10.8
43
65
17
179
25
23
21
29
1.99
37308986--37309487
132
3.8
132
88
1
736
26
22
21
29
1.99
37308998--37309477
264
1.8
265
94
0
854
25
23
21
28
1.99
37318957--37319192
27
8.7
27
86
3
305
28
23
8
39
1.83
37320432--37320479
25
1.9
25
86
0
69
33
25
16
25
1.96
37320523--37320581
20
3.0
20
92
0
100
37
11
20
30
1.89
37320632--37320725
23
4.0
24
83
8
104
28
19
24
27
1.98
37320918--37321019
31
3.1
31
78
17
123
39
15
21
23
1.92
37320935--37321042
38
2.8
38
94
1
189
39
14
22
23
1.91
37323343--37323488
64
2.2
65
82
7
168
32
17
28
21
1.96
37323299--37323549
68
3.8
63
77
8
202
29
16
29
24
1.96
37327901--37327987
37
2.3
36
90
5
138
25
33
20
20
1.97
37328036--37328210
51
3.5
51
91
3
282
28
27
10
33
1.89
37328056--37328210
49
3.1
49
92
3
265
29
26
9
34
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37331228--37331333
41
2.6
41
79
10
110
24
24
22
28
2.00
37332077--37332308
40
5.8
40
95
0
383
26
29
20
24
1.99
37333616--37333791
46
3.8
46
79
12
216
20
21
29
28
1.98
37333613--37333784
93
1.8
93
96
0
317
20
21
29
27
1.98
37336900--37336986
37
2.3
36
90
5
138
25
33
20
20
1.97
37337055--37337256
49
4.1
49
97
0
368
30
26
8
34
1.87
37341771--37342038
49
5.6
48
73
12
219
27
21
28
22
1.99
37341774--37342038
142
1.9
142
86
4
383
27
21
28
22
1.99
37344747--37344876
40
3.2
40
82
4
156
23
29
24
22
1.99
37349248--37349317
27
2.5
28
88
2
106
27
12
27
32
1.93
37354585--37354666
7
11.0
7
74
11
56
71
1
1
25
1.00
37354581--37354664
14
6.0
13
75
15
62
71
1
1
26
1.01
37354572--37354660
23
4.1
21
75
13
65
69
1
2
26
1.07
37354584--37354623
14
2.9
14
92
3
64
77
0
0
22
0.77
37372584--37372767
40
4.6
39
75
6
138
26
23
27
22
2.00
37372624--37372812
80
2.4
81
77
4
186
23
24
29
22
1.99
37379457--37379683
40
5.7
40
87
2
314
32
27
22
18
1.97
37389110--37389136
13
2.1
13
100
0
54
14
37
33
14
1.88
37389645--37389684
20
2.0
20
100
0
80
15
10
25
50
1.74
37395501--37395716
46
4.6
46
77
8
188
29
20
28
21
1.98
37395547--37395768
47
4.7
47
76
8
186
28
19
29
22
1.98
37395506--37395769
140
1.9
141
81
5
329
29
19
28
22
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37421709--37421871
39
4.2
39
89
3
247
23
20
31
24
1.98
37421730--37421907
39
4.5
40
85
3
148
22
21
32
23
1.98
37429161--37429323
39
4.2
39
88
0
245
23
19
33
24
1.97
37432817--37432978
60
2.7
62
86
2
204
32
14
24
29
1.94
37432877--37432990
60
1.9
60
85
3
158
35
15
22
25
1.94
37433287--37433317
16
1.9
16
93
0
53
9
6
9
74
1.23
37434674--37434749
37
2.1
36
83
11
93
40
2
2
53
1.28
37450872--37450900
12
2.5
12
94
5
51
72
0
0
27
0.85
37455179--37455224
19
2.4
19
96
0
83
13
28
30
28
1.94
37459504--37459679
42
4.0
42
70
8
118
27
26
19
26
1.99
37459540--37459727
90
2.1
90
80
2
207
26
26
19
28
1.99
37459671--37459765
48
2.0
48
83
4
120
21
25
23
30
1.99
37465305--37465394
42
2.1
41
84
8
110
28
25
17
27
1.98
37465211--37465424
90
2.4
90
75
6
200
29
25
17
27
1.97
37465350--37465470
48
2.5
47
80
5
134
28
25
18
27
1.98
37468936--37469084
80
1.9
80
81
2
183
22
30
24
22
1.99
37468977--37469084
40
2.7
38
85
8
128
21
29
25
23
1.99
37477051--37477199
80
1.9
80
81
2
183
22
30
24
22
1.99
37477092--37477199
40
2.7
38
85
8
128
21
29
25
23
1.99
37481246--37481394
80
1.9
80
81
2
183
22
30
24
22
1.99
37481287--37481394
40
2.7
38
85
8
128
21
29
25
23
1.99
37489357--37489505
80
1.9
80
81
2
183
22
30
24
22
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37489398--37489505
40
2.7
38
85
8
128
21
29
25
23
1.99
37494109--37494140
16
2.0
16
100
0
64
50
6
6
37
1.53
37499115--37499263
43
3.5
42
78
12
144
26
25
20
28
1.99
37499157--37499280
43
3.0
41
76
14
135
30
24
20
25
1.98
37499148--37499284
42
3.2
42
74
13
136
29
25
19
25
1.99
37500743--37500841
28
3.5
29
83
6
114
30
27
15
27
1.96
37508751--37508849
28
3.5
28
84
4
119
31
27
14
27
1.95
37517716--37517936
43
5.2
43
75
4
189
28
25
19
25
1.99
37517704--37517902
42
4.7
43
76
6
190
29
24
20
25
1.99
37517741--37517939
85
2.3
85
93
0
335
28
26
21
24
1.99
37527017--37527144
49
2.7
47
85
3
148
30
19
26
23
1.98
37528395--37528436
22
2.0
21
85
4
57
9
40
28
21
1.84
37530357--37530416
17
3.4
16
76
17
57
43
1
5
50
1.34
37533109--37533162
27
2.0
27
85
3
74
35
20
22
22
1.96
37533163--37533335
27
6.4
27
84
0
202
23
19
21
35
1.96
37537429--37537639
43
4.9
43
75
12
166
30
15
22
31
1.95
37544014--37544071
25
2.4
23
82
8
62
20
5
1
72
1.13
37554279--37554424
61
2.4
61
97
0
274
39
7
19
33
1.80
37556146--37556172
2
13.5
2
100
0
54
51
0
0
48
1.00
37556483--37556591
43
2.6
43
85
1
148
32
32
15
20
1.94
37560525--37560633
57
1.9
57
90
0
173
43
15
11
29
1.83
37563942--37563974
2
16.5
2
100
0
66
0
51
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37567146--37567170
11
2.3
11
100
0
50
44
36
0
20
1.52
37569763--37569902
59
2.4
59
85
5
187
44
1
3
50
1.28
37569763--37569905
29
5.0
26
70
20
81
44
1
3
51
1.27
37570064--37570117
16
3.4
16
80
10
56
29
24
3
42
1.72
37570064--37570126
32
2.0
32
83
0
81
28
25
3
42
1.70
37570074--37570126
16
3.3
16
82
10
63
28
26
1
43
1.65
37570469--37570557
44
2.0
44
82
8
108
32
7
23
35
1.84
37570651--37570757
52
1.9
53
83
10
135
52
2
0
44
1.15
37574072--37574176
52
2.0
53
96
1
194
39
4
7
48
1.53
37575811--37575887
21
3.5
21
73
22
61
29
0
2
67
1.04
37575827--37575875
26
2.0
24
88
8
71
32
0
4
63
1.13
37575830--37575887
25
2.3
26
82
5
75
29
0
3
67
1.07
37576376--37576437
31
1.9
33
87
6
92
37
0
3
59
1.13
37579021--37579057
5
7.2
5
90
3
56
37
0
21
40
1.54
37579473--37579706
45
5.2
45
92
0
369
19
19
20
41
1.91
37579695--37579759
6
10.7
6
74
9
60
18
18
16
46
1.85
37583657--37583686
5
6.0
5
100
0
60
80
0
0
20
0.72
37584702--37584739
14
2.9
13
84
7
51
84
5
2
7
0.86
37587541--37587579
18
2.2
18
85
0
51
61
0
0
38
0.96
37597026--37597059
17
2.0
17
94
0
59
35
8
23
32
1.86
37598187--37598246
30
2.0
30
100
0
120
30
10
10
50
1.69
37599862--37599964
48
2.1
48
81
5
116
41
2
2
52
1.31
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37600169--37600219
25
2.0
26
84
3
68
37
11
9
41
1.75
37605754--37605821
29
2.3
29
92
0
109
13
33
26
26
1.93
37606309--37606482
58
3.0
56
64
18
140
44
23
2
28
1.67
37606252--37606482
116
2.0
116
99
0
453
44
23
2
29
1.65
37607044--37607200
42
3.7
43
75
16
146
30
25
20
23
1.98
37607044--37607200
86
1.8
85
82
11
205
30
25
20
23
1.98
37615140--37615249
42
2.6
42
78
7
116
29
22
21
26
1.99
37620359--37620489
29
4.5
29
78
5
122
25
18
31
25
1.98
37622825--37623004
40
4.5
40
79
4
175
25
23
25
25
2.00
37622826--37623018
80
2.4
80
80
2
199
26
23
25
23
2.00

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328