Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr07 97507971 
Parameters: 2 7 7 80 10 50 1000
Length:  97507971

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   

This is table  297  of  328  ( 39316 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
88643111--88643179
34
2.0
34
100
0
138
28
14
30
26
1.95
88643266--88643290
13
1.9
13
100
0
50
16
24
24
36
1.94
88649720--88649830
47
2.4
47
84
6
154
35
23
16
25
1.95
88654451--88654561
47
2.4
47
84
6
154
35
23
16
25
1.95
88661706--88661815
47
2.4
46
83
7
143
35
23
15
25
1.94
88667785--88667824
21
1.9
21
85
10
55
40
0
2
57
1.12
88667789--88667830
19
2.2
20
83
12
52
38
0
2
59
1.10
88673303--88673396
44
2.2
44
94
1
163
48
11
12
26
1.75
88675882--88675917
12
2.9
12
88
8
54
41
2
2
52
1.30
88676623--88676671
23
2.1
22
82
14
55
48
4
6
40
1.47
88679207--88679285
26
3.0
26
75
10
79
43
3
2
50
1.33
88684230--88684315
43
2.0
43
88
0
127
24
20
0
54
1.45
88684277--88684309
16
1.9
18
88
11
52
21
18
0
60
1.36
88699381--88699435
27
2.0
27
100
0
110
40
25
21
12
1.89
88700083--88700134
24
2.2
24
90
6
81
75
5
17
1
1.10
88704916--88704961
20
2.3
20
96
0
83
23
26
4
45
1.71
88709019--88709075
30
1.9
30
82
13
73
47
3
0
49
1.18
88715179--88715362
40
4.6
39
80
9
185
26
23
24
26
2.00
88715180--88715388
79
2.6
79
82
8
239
27
22
24
25
2.00
88728447--88728755
9
32.2
9
67
19
92
32
4
2
60
1.30
88728441--88728556
10
11.7
10
67
16
55
37
3
3
56
1.33
88728446--88728494
19
2.6
19
74
25
50
38
8
0
53
1.31
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
88728493--88728543
21
2.3
22
90
6
77
35
0
7
56
1.28
88728562--88728601
19
2.2
17
86
8
53
45
0
2
52
1.14
88728598--88728755
28
5.6
28
69
19
80
25
5
1
67
1.21
88728673--88728753
28
2.9
27
80
8
83
23
3
1
71
1.09
88730527--88730656
3
43.7
3
79
7
131
59
1
6
33
1.32
88730826--88730856
2
15.5
2
100
0
62
51
0
0
48
1.00
88732825--88733798
86
11.3
86
95
0
1677
20
24
20
34
1.97
88732825--88733981
44
26.8
45
63
21
273
21
23
20
34
1.97
88733743--88733975
45
5.3
44
74
8
163
23
21
21
33
1.97
88734038--88734162
61
2.0
64
87
7
186
35
13
18
32
1.90
88735801--88735847
24
1.9
25
86
4
69
0
17
0
82
0.66
88738484--88738530
20
2.4
19
86
10
60
46
12
21
19
1.82
88740566--88740628
27
2.8
21
71
26
56
61
0
12
25
1.31
88740699--88740825
3
42.7
3
79
7
125
59
1
6
33
1.32
88744715--88744744
15
1.9
16
93
6
53
76
0
23
0
0.78
88752222--88752982
295
2.6
296
82
4
840
40
11
13
34
1.81
88753512--88753551
3
13.3
3
100
0
80
35
0
0
65
0.93
88756067--88756108
17
2.5
17
81
11
50
30
9
0
59
1.29
88769884--88769920
6
6.5
6
90
9
60
0
16
0
83
0.64
88769884--88769920
11
3.3
11
92
7
65
0
16
0
83
0.64
88769884--88769920
17
2.2
17
90
9
58
0
16
0
83
0.64
88773644--88773730
10
8.9
9
69
22
52
63
2
5
28
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
88773960--88774019
25
2.4
25
76
13
61
43
1
1
53
1.20
88776121--88776161
18
2.3
18
84
12
50
24
7
14
53
1.66
88777160--88777200
19
2.3
17
91
8
64
70
0
29
0
0.87
88778350--88778393
18
2.4
18
85
7
54
34
9
18
38
1.82
88780478--88780503
2
13.0
2
100
0
52
50
0
0
50
1.00
88782239--88782263
2
12.5
2
100
0
50
48
0
0
52
1.00
88782838--88782880
2
21.5
2
100
0
86
48
0
0
51
1.00
88787808--88787839
11
2.9
11
95
0
55
18
18
50
12
1.78
88788116--88788163
25
1.9
25
86
0
69
33
25
16
25
1.96
88788207--88788270
20
3.2
20
95
0
110
34
10
21
32
1.89
88788211--88788265
11
5.4
11
70
16
55
36
12
20
30
1.90
88788317--88788483
23
7.1
23
94
2
253
28
20
21
29
1.98
88788316--88788505
24
8.0
23
90
4
256
28
21
22
28
1.99
88788317--88788504
47
4.0
46
88
6
261
27
21
22
28
1.99
88788696--88788759
31
2.1
31
96
0
119
39
15
21
23
1.92
88789498--88789530
9
3.7
9
91
0
57
45
0
3
51
1.16
88793064--88793116
18
2.9
18
83
5
54
41
0
1
56
1.10
88795234--88795263
15
2.0
15
93
0
51
36
10
26
26
1.88
88795844--88798488
664
4.0
664
97
0
5031
27
12
18
41
1.86
88799005--88799037
12
2.8
12
90
0
57
27
0
51
21
1.48
88802718--88802779
26
2.3
26
86
5
79
30
25
14
29
1.95
88802884--88803048
27
6.1
26
79
6
159
17
22
21
38
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
88802884--88803044
54
3.0
54
88
1
234
17
22
22
37
1.94
88804244--88804274
2
15.5
2
100
0
62
48
0
0
51
1.00
88804485--88804528
16
2.5
19
75
17
51
18
45
22
13
1.84
88804407--88804548
76
1.9
76
82
7
182
19
36
21
23
1.95
88806732--88806778
23
2.0
23
100
0
94
21
12
36
29
1.91
88810140--88810204
24
2.8
24
79
4
71
32
18
26
23
1.97
88813944--88813975
6
5.3
6
92
0
55
15
3
0
81
0.82
88815410--88815472
30
2.1
31
87
3
92
42
3
9
44
1.52
88818535--88818579
23
2.0
23
100
0
90
46
17
8
26
1.78
88821888--88821916
13
2.1
14
93
6
51
55
10
0
34
1.34
88823576--88823630
27
2.0
27
100
0
110
18
30
7
43
1.77
88824774--88824875
51
2.0
51
90
0
159
33
19
14
32
1.92
88828677--88828726
22
2.5
20
84
12
66
34
2
0
64
1.05
88828770--88828830
30
2.1
29
84
9
79
24
6
6
62
1.44
88840953--88841589
118
5.4
119
91
2
1023
32
18
20
28
1.96
88840953--88841621
237
2.8
237
93
1
1092
32
18
20
28
1.96
88840953--88841623
119
5.7
119
91
1
1001
32
18
20
28
1.96
88841536--88841716
83
2.2
83
83
0
236
37
16
16
29
1.91
88843267--88843342
3
24.7
3
70
19
50
32
2
2
61
1.23
88843277--88843346
21
3.6
19
82
16
81
32
4
0
62
1.14
88843371--88843428
30
2.0
29
83
10
73
25
6
5
62
1.42
88845046--88845077
15
2.1
15
94
0
55
43
15
28
12
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
88846572--88846601
15
2.0
15
93
0
51
50
0
26
23
1.50
88846869--88846940
27
2.8
25
87
6
92
16
30
18
34
1.93
88855889--88856000
43
2.6
43
79
12
131
24
18
27
29
1.98
88861460--88861683
56
4.0
56
86
4
292
28
14
24
33
1.94
88866985--88867021
13
2.9
13
88
4
58
24
5
37
32
1.78
88870878--88871052
45
3.8
46
79
13
216
29
29
20
20
1.98
88870885--88871056
93
1.9
92
96
1
317
27
30
20
20
1.98
88873426--88873514
30
3.0
30
79
11
94
56
15
17
10
1.67
88873426--88873508
15
5.6
14
73
10
58
55
16
18
9
1.68
88873437--88873514
15
5.2
15
75
9
70
55
15
17
11
1.69
88876419--88876591
93
1.9
93
91
2
285
27
28
21
22
1.99
88876412--88876587
46
3.8
45
75
12
171
28
27
21
22
1.99
88880384--88880418
13
2.8
13
91
4
54
25
8
34
31
1.86
88895286--88895330
20
2.2
20
84
7
56
33
13
2
51
1.53
88904998--88905045
25
1.9
25
86
0
69
33
25
16
25
1.96
88905088--88905148
20
3.0
20
92
0
104
34
11
21
32
1.89
88905198--88905362
24
7.0
24
91
5
239
29
21
22
26
1.99
88905198--88905348
70
2.1
71
92
2
250
29
21
22
26
1.99
88905554--88905616
31
2.1
31
90
3
101
36
15
23
23
1.94
88911744--88911791
25
1.9
25
86
0
69
33
25
16
25
1.96
88911834--88911894
20
3.0
20
92
0
104
34
11
21
32
1.89
88911944--88912110
24
7.0
24
93
3
257
28
22
22
26
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
88911944--88912111
71
2.3
71
90
4
257
29
22
22
26
1.99
88912302--88912365
31
2.1
31
90
0
101
35
15
25
23
1.94
88913102--88913149
20
2.4
20
76
13
53
35
20
29
14
1.93
88913383--88913409
2
13.5
2
100
0
54
51
0
0
48
1.00
88921673--88921707
15
2.2
16
90
5
54
34
0
0
65
0.93
88921673--88921726
29
2.0
26
85
10
72
27
3
1
66
1.19
88926139--88926172
5
6.6
5
93
6
59
17
0
0
82
0.67
88926139--88926172
16
2.2
16
94
5
61
17
0
0
82
0.67
88937450--88937577
46
2.8
46
92
2
204
17
21
31
30
1.96
88941618--88941742
46
2.7
46
90
2
180
19
20
29
30
1.97

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328