Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr07 97507971 
Parameters: 2 7 7 80 10 50 1000
Length:  97507971

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   

This is table  15  of  328  ( 39316 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4604104--4604608
43
11.6
44
72
8
291
36
21
21
21
1.96
4604278--4604615
87
3.9
87
76
3
329
35
21
21
21
1.96
4604802--4605207
68
6.0
67
86
5
523
26
20
23
29
1.99
4604826--4605207
137
2.8
135
87
5
531
26
20
23
29
1.99
4605298--4605408
44
2.5
45
81
8
136
27
18
24
28
1.98
4613232--4613258
6
4.5
6
100
0
54
85
0
0
14
0.61
4613817--4613915
9
10.4
9
75
7
81
36
3
1
59
1.20
4613817--4613908
20
4.8
18
77
15
69
35
3
1
59
1.21
4613817--4613908
29
3.2
28
79
13
107
35
3
1
59
1.21
4613828--4613909
19
4.2
19
70
16
69
32
3
1
62
1.21
4614570--4614635
19
3.4
19
75
4
69
33
4
24
37
1.76
4614558--4614633
39
1.9
39
83
0
98
30
6
23
39
1.80
4623760--4623792
7
4.7
7
96
0
57
90
0
9
0
0.44
4623774--4623820
24
1.9
23
83
12
58
76
12
4
6
1.12
4623846--4623887
12
3.5
12
100
0
84
9
42
0
47
1.36
4624288--4624344
29
2.0
29
82
6
71
22
10
7
59
1.54
4624587--4624616
11
2.7
11
89
0
51
40
0
0
60
0.97
4636336--4636369
6
6.0
6
90
10
54
85
0
14
0
0.60
4638091--4638266
46
3.8
46
79
12
216
20
21
29
28
1.98
4638088--4638259
93
1.8
93
96
0
317
20
21
29
27
1.98
4639764--4639791
14
2.0
14
100
0
56
28
35
28
7
1.84
4645174--4645344
46
3.8
45
76
13
181
19
20
29
29
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4649835--4649863
14
2.1
14
100
0
58
13
13
6
65
1.45
4650164--4650192
14
2.1
14
100
0
58
13
13
6
65
1.45
4649777--4651889
163
13.5
162
88
6
2827
28
17
20
33
1.95
4650327--4650354
13
2.2
13
100
0
56
14
14
7
64
1.48
4650341--4651928
72
20.7
74
81
12
1628
29
17
20
33
1.95
4650784--4650811
14
2.0
14
100
0
56
14
14
7
64
1.48
4650944--4650972
14
2.1
14
100
0
58
13
13
6
65
1.45
4649871--4651933
617
3.3
620
96
2
3717
28
17
20
33
1.95
4651401--4651429
14
2.1
14
100
0
58
13
13
6
65
1.45
4651564--4651592
14
2.1
14
100
0
58
13
13
6
65
1.45
4652244--4652342
44
2.2
45
80
3
103
38
17
15
29
1.90
4652654--4652724
35
2.0
35
94
0
124
18
46
9
25
1.79
4653106--4653142
11
3.3
11
92
7
65
75
8
0
16
1.02
4653106--4653142
12
3.2
12
96
3
67
75
8
0
16
1.02
4653242--4653276
11
3.2
11
88
11
54
0
54
0
45
0.99
4653754--4653801
3
16.3
3
95
4
89
33
0
0
66
0.92
4653903--4653965
3
21.0
3
100
0
126
33
0
0
66
0.92
4654180--4654252
33
2.3
30
82
11
92
36
5
2
54
1.38
4658414--4658440
13
2.1
13
100
0
54
55
14
0
29
1.40
4662260--4662335
24
3.1
24
81
9
82
15
3
3
76
1.09
4662297--4662346
25
2.0
25
84
7
66
28
0
2
70
0.99
4664836--4664883
21
2.2
21
77
3
51
27
14
2
56
1.50
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4665086--4665134
20
2.5
20
83
3
64
26
12
6
55
1.60
4672368--4672410
22
2.0
22
86
9
61
27
6
4
60
1.43
4676647--4676678
13
2.5
13
94
0
55
43
28
0
28
1.55
4677237--4677263
5
5.4
5
100
0
54
18
0
0
81
0.69
4679383--4679429
12
3.8
12
78
10
58
51
0
0
48
1.00
4679383--4679430
6
7.7
6
77
9
51
50
0
0
50
1.00
4679375--4679430
26
2.2
26
100
0
112
46
0
0
53
1.00
4679358--4679417
14
4.4
14
75
12
63
41
0
0
58
0.98
4681085--4681152
32
2.2
32
84
10
88
55
1
1
41
1.18
4683241--4683325
34
2.7
31
86
13
129
71
18
5
3
1.21
4684064--4684165
37
2.6
37
75
20
93
32
4
4
57
1.41
4685834--4685869
12
3.0
12
87
0
54
25
22
5
47
1.73
4692732--4693152
70
6.2
69
73
13
358
24
14
22
39
1.91
4693006--4693534
75
7.2
71
71
12
275
27
17
20
34
1.95
4693223--4693910
79
8.5
75
71
17
370
29
17
19
33
1.95
4693452--4693624
94
1.8
94
85
2
240
28
20
19
31
1.97
4693619--4694122
88
6.0
83
72
13
257
27
16
18
36
1.93
4693892--4693953
30
2.1
30
90
6
99
19
9
29
41
1.83
4693350--4694122
250
3.1
247
84
7
864
27
17
19
35
1.94
4694778--4694871
31
3.0
31
83
14
129
72
17
5
5
1.22
4695614--4695715
37
2.6
37
75
20
93
32
4
4
57
1.41
4697349--4697415
26
2.5
28
86
13
106
52
0
0
47
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4698517--4698545
11
2.5
12
94
5
51
89
6
0
3
0.57
4699043--4699085
22
1.9
23
85
4
61
48
4
0
46
1.22
4705785--4705852
10
6.6
10
75
14
59
66
4
2
26
1.25
4705709--4705872
20
8.4
19
67
16
77
60
4
2
32
1.29
4710842--4710900
23
2.6
23
94
0
100
30
55
5
8
1.51
4722936--4723069
71
1.9
71
90
0
214
30
16
23
29
1.96
4722722--4723228
160
3.2
160
97
0
946
28
17
21
32
1.96
4723096--4723345
74
3.5
71
83
4
286
31
16
21
30
1.95
4723479--4723503
13
1.9
13
100
0
50
16
16
4
64
1.44
4723293--4723547
67
3.8
68
75
12
217
28
14
14
41
1.86
4724117--4724237
23
5.2
24
89
2
133
34
50
4
10
1.56
4724133--4724237
23
4.6
23
89
2
140
33
53
3
9
1.51
4724771--4724800
14
2.1
15
93
6
53
0
53
0
46
1.00
4724758--4724810
22
2.4
22
75
12
54
0
52
1
45
1.11
4725263--4725324
21
2.7
22
78
19
65
33
1
3
61
1.22
4725275--4725323
21
2.3
21
83
16
66
32
0
2
65
1.04
4725359--4725389
13
2.3
14
94
5
55
41
0
6
51
1.27
4725912--4725969
13
4.3
13
71
16
55
36
1
8
53
1.42
4729847--4729892
2
23.0
2
100
0
92
50
0
50
0
1.00
4732693--4732728
2
18.0
2
100
0
72
50
0
50
0
1.00
4737837--4738138
152
2.0
152
96
0
550
49
22
6
21
1.73
4741339--4741368
11
2.7
11
100
0
60
30
6
33
30
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4744566--4744634
36
1.9
35
82
2
84
39
5
1
53
1.34
4751948--4751972
13
1.9
13
100
0
50
24
24
12
40
1.88
4755180--4755256
39
2.0
39
97
0
145
33
5
6
54
1.48
4761649--4761694
23
2.0
23
83
8
58
47
0
2
50
1.13
4764402--4764443
19
2.2
20
87
12
61
59
2
4
33
1.31
4768481--4768535
28
2.0
27
85
3
74
58
0
1
40
1.09
4768969--4769003
6
5.8
6
100
0
70
65
0
0
34
0.93
4769113--4769164
21
2.5
21
77
0
59
34
32
5
26
1.80
4772450--4772493
22
2.0
21
82
4
52
50
0
0
50
1.00
4772551--4772966
210
2.0
210
100
0
832
27
20
12
40
1.87
4774779--4774812
13
2.6
13
85
0
50
67
0
0
32
0.91
4782106--4782222
51
2.3
51
92
0
189
26
23
17
32
1.97
4784970--4785021
24
2.2
24
89
0
77
55
9
1
32
1.43
4786102--4786147
4
11.5
4
100
0
92
26
0
23
50
1.50
4816743--4816776
13
2.5
14
85
4
52
73
0
0
26
0.83
4818671--4818709
12
3.2
12
88
0
51
0
35
0
64
0.94
4833677--4833819
71
2.0
71
91
0
232
29
9
24
37
1.86
4837179--4837230
26
1.9
28
88
7
81
19
5
3
71
1.22
4837163--4837230
31
2.1
33
86
5
95
20
7
4
67
1.33
4837181--4837230
5
9.4
5
83
12
64
20
4
4
72
1.18
4838376--4838400
2
12.5
2
100
0
50
48
0
0
52
1.00
4838637--4838701
16
4.1
15
75
15
60
23
1
3
72
1.07
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4838650--4838715
31
2.1
32
83
8
82
28
1
1
68
1.08
4841037--4841076
20
2.0
20
85
14
55
27
0
5
67
1.11
4847280--4847304
6
4.2
6
100
0
50
64
0
16
20
1.30
4849385--4849454
36
1.9
36
82
5
88
61
7
7
24
1.47
4860596--4860624
12
2.4
12
100
0
58
68
0
0
31
0.89
4860550--4860613
26
2.6
24
79
11
76
64
1
0
34
1.03
4860553--4860639
21
4.0
20
73
22
61
67
2
0
29
1.03
4861246--4861277
12
2.6
12
95
5
55
9
15
28
46
1.77
4861262--4861402
74
1.9
75
85
4
196
33
17
17
31
1.93
4861883--4861920
15
2.6
14
87
4
58
18
0
36
44
1.50

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328