Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr07 97507971 
Parameters: 2 7 7 80 10 50 1000
Length:  97507971

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   

This is table  145  of  328  ( 39316 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42344537--42344619
38
2.2
39
93
4
150
49
13
4
32
1.63
42344539--42344599
19
3.2
19
65
17
54
49
9
6
34
1.62
42346681--42346898
40
5.5
40
87
4
273
24
27
24
23
2.00
42350010--42350259
40
6.2
40
90
1
385
25
24
28
22
1.99
42358187--42358436
40
6.2
40
90
1
385
25
24
28
22
1.99
42360817--42360861
15
3.1
15
90
3
74
33
26
13
26
1.93
42365551--42365710
43
3.7
43
78
12
159
30
25
18
25
1.98
42365551--42365709
44
3.7
42
78
12
171
30
25
18
25
1.98
42365554--42365710
86
1.8
85
81
9
194
30
26
18
24
1.98
42367439--42367589
40
3.8
40
77
13
134
27
23
26
22
2.00
42367476--42367605
40
3.2
40
77
4
138
24
23
27
23
2.00
42373791--42374104
94
3.3
95
78
7
277
23
27
19
29
1.98
42373741--42374106
47
7.8
47
69
18
185
23
27
19
29
1.98
42379067--42379218
40
3.8
40
76
10
150
21
25
22
30
1.99
42387133--42387278
40
3.7
40
83
0
166
23
27
21
26
1.99
42387165--42387316
40
3.8
40
83
3
162
22
26
22
28
1.99
42394481--42394838
27
13.3
27
83
3
409
35
18
20
25
1.95
42395240--42395380
31
4.5
31
87
0
183
19
16
15
48
1.81
42395293--42395389
6
15.8
6
72
16
65
20
17
15
46
1.84
42395240--42395405
62
2.7
62
83
2
183
19
15
15
49
1.80
42399171--42399314
40
3.6
40
92
1
227
29
28
22
20
1.98
42401035--42401113
25
3.3
25
64
10
74
32
27
5
34
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42400985--42401195
47
4.4
48
92
2
311
27
29
9
32
1.88
42402710--42402931
124
1.8
122
82
3
284
31
11
24
32
1.90
42402890--42403040
40
3.8
40
77
11
141
26
24
27
21
2.00
42402927--42403056
40
3.2
40
79
2
154
23
23
28
23
2.00
42402889--42403056
80
2.1
80
82
6
207
26
23
27
22
2.00
42405162--42405292
30
4.5
30
86
8
171
32
13
25
28
1.94
42405162--42405292
58
2.2
58
86
4
174
32
13
25
28
1.94
42413136--42413267
30
4.5
31
87
7
168
31
13
25
28
1.94
42413136--42413267
59
2.2
59
85
5
169
31
13
25
28
1.94
42422022--42422172
40
3.8
40
77
11
141
26
24
27
21
2.00
42422059--42422188
40
3.2
40
79
2
154
23
23
28
23
2.00
42422021--42422188
80
2.1
80
82
6
207
26
23
27
22
2.00
42423545--42423711
49
3.4
49
91
3
255
27
27
10
34
1.90
42427898--42428256
47
7.6
47
72
11
227
23
28
19
28
1.98
42427898--42428252
141
2.5
140
79
7
353
23
29
18
28
1.98
42427898--42428256
94
3.8
93
77
9
336
23
28
19
28
1.98
42432319--42432392
37
2.0
37
97
0
139
32
12
12
43
1.79
42432326--42432406
37
2.1
37
90
4
108
34
8
13
43
1.75
42446106--42446132
13
2.1
13
100
0
54
14
7
7
70
1.32
42454507--42454750
40
6.1
40
84
2
242
20
27
25
27
1.99
42461126--42461178
24
2.3
23
84
15
67
26
16
47
9
1.77
42461140--42461178
12
3.2
12
86
13
62
28
17
46
7
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42462382--42462468
27
3.1
27
74
18
97
39
9
29
21
1.85
42463589--42463620
17
1.9
16
93
6
55
6
28
0
65
1.16
42464517--42464576
25
2.3
26
82
8
77
33
28
8
30
1.86
42464681--42464755
28
2.9
23
87
2
60
20
24
22
33
1.97
42464679--42464792
27
4.2
26
88
5
147
19
22
20
37
1.94
42472903--42472936
15
2.3
15
94
0
59
35
17
5
41
1.74
42479632--42479695
25
2.6
24
76
13
60
70
1
21
6
1.18
42480863--42480927
29
2.2
29
94
0
112
30
16
27
24
1.97
42485898--42486101
40
5.1
41
92
2
303
23
23
27
25
2.00
42493903--42494012
40
2.8
40
94
2
186
21
23
29
25
1.99
42494004--42494044
20
2.0
21
95
4
75
24
21
14
39
1.91
42497924--42497992
34
2.0
34
94
0
120
39
28
14
17
1.89
42503295--42503328
17
2.0
17
88
0
50
55
2
0
41
1.15
42503315--42503354
17
2.4
16
84
12
53
75
5
0
20
0.99
42503316--42503360
18
2.5
17
82
7
54
75
4
0
20
0.97
42504369--42504402
16
2.1
17
88
5
52
55
2
2
38
1.30
42504826--42504892
33
2.0
33
97
0
125
41
10
8
38
1.71
42512184--42512214
2
15.5
2
100
0
62
51
0
0
48
1.00
42513340--42513370
10
3.2
10
95
4
55
32
9
0
58
1.31
42516440--42516471
16
2.1
15
94
5
55
50
28
18
3
1.62
42516870--42516980
27
4.2
26
87
5
141
16
23
22
37
1.93
42520717--42520788
28
2.5
28
91
6
110
29
26
13
30
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42520716--42520810
28
3.3
28
83
7
84
30
28
12
28
1.93
42522235--42522332
28
3.5
28
84
4
108
29
16
24
29
1.96
42530336--42530367
16
2.1
15
94
5
55
50
28
18
3
1.62
42530784--42530894
27
4.2
26
80
10
116
17
23
21
37
1.93
42530784--42530894
54
2.1
53
84
5
143
17
23
21
37
1.93
42531899--42531927
14
2.0
15
93
6
51
51
20
0
27
1.47
42534158--42534286
64
2.0
64
98
0
249
33
26
13
27
1.93
42539539--42539567
14
2.0
15
93
6
51
51
20
0
27
1.47
42542326--42542584
47
5.5
46
73
10
195
28
20
29
21
1.98
42549875--42550133
47
5.6
45
73
11
168
28
19
30
22
1.98
42553674--42553815
40
3.5
40
83
1
124
27
23
26
22
1.99
42553713--42553841
40
3.2
39
84
6
152
24
22
27
25
2.00
42564159--42564406
40
6.2
40
89
1
347
26
27
21
23
1.99
42564159--42564406
120
2.1
120
90
2
383
26
27
21
23
1.99
42572401--42572625
40
5.7
40
90
4
332
25
28
22
23
1.99
42572401--42572625
117
1.9
118
92
2
382
25
28
22
23
1.99
42575806--42575878
29
2.5
29
100
0
146
31
15
28
24
1.95
42575806--42575915
29
3.9
28
84
9
134
31
14
26
27
1.95
42575806--42575936
29
4.6
27
84
9
90
30
16
27
25
1.96
42583746--42583847
29
3.5
29
100
0
204
32
14
28
24
1.95
42583834--42583906
29
2.5
29
84
0
92
28
17
26
27
1.98
42583747--42583906
58
2.8
58
85
9
195
31
15
26
25
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42588839--42588904
34
1.9
34
87
0
96
28
7
22
40
1.81
42596996--42597034
20
2.0
20
85
10
53
38
17
0
43
1.50
42610593--42610639
17
2.8
17
90
3
69
29
10
23
36
1.89
42610637--42610671
14
2.5
14
100
0
70
28
0
28
42
1.56
42612654--42612821
37
4.6
37
81
3
162
30
22
22
25
1.99
42612654--42612836
74
2.5
73
81
6
226
29
21
22
26
1.99
42614513--42614598
43
2.0
43
83
0
109
32
19
11
36
1.88
42614973--42615075
34
3.0
34
91
2
163
50
5
18
25
1.69
42615186--42615257
32
2.3
31
83
9
83
43
1
11
44
1.48
42616008--42616158
40
3.8
40
80
0
131
21
26
16
35
1.94
42616337--42616424
43
2.0
43
100
0
176
23
20
15
39
1.91
42623199--42623229
16
1.9
16
93
0
53
38
6
9
45
1.63
42624316--42624426
54
2.1
54
81
6
127
27
23
30
18
1.98
42627039--42627092
24
2.4
22
78
6
54
59
7
3
29
1.42
42633700--42633776
3
25.0
3
84
10
102
32
3
0
63
1.12
42635667--42635749
41
2.0
41
88
4
123
30
12
21
36
1.90
42646323--42646529
53
3.8
55
75
4
170
19
24
16
38
1.92
42646335--42646480
55
2.7
52
75
10
132
18
25
18
37
1.93
42648171--42648217
2
23.5
2
100
0
94
51
0
0
48
1.00
42649595--42650229
44
14.0
44
75
12
421
31
17
21
30
1.96
42649595--42650229
88
7.0
88
74
13
482
31
17
21
30
1.96
42649595--42650229
132
4.6
134
75
12
540
31
17
21
30
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42649899--42650019
51
2.4
49
81
12
129
33
17
20
28
1.95
42652046--42652074
14
2.1
14
100
0
58
10
6
34
48
1.64
42660797--42660863
33
2.0
33
100
0
134
5
23
14
55
1.62
42672086--42672116
7
4.4
7
95
0
53
22
0
41
35
1.54
42673234--42673432
63
3.2
63
70
8
163
24
21
28
26
1.99
42680113--42680377
132
2.0
132
94
1
460
39
14
7
38
1.75
42683483--42683665
79
2.3
81
85
5
248
23
21
27
27
1.99
42683483--42683667
40
4.7
40
84
4
232
23
21
28
27
1.99
42683484--42683692
79
2.6
79
79
10
239
24
20
27
27
1.99
42694329--42694364
2
18.0
2
94
0
63
50
2
0
47
1.15

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328