Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr07 97507971 
Parameters: 2 7 7 80 10 50 1000
Length:  97507971

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   

This is table  14  of  328  ( 39316 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4192051--4192086
8
4.6
8
96
3
65
88
0
11
0
0.50
4192490--4192547
30
1.9
31
85
3
82
51
6
10
31
1.62
4211362--4211392
2
15.5
2
93
0
53
45
0
0
54
0.99
4212487--4212532
19
2.4
19
85
0
65
65
2
4
28
1.23
4220162--4220204
21
2.1
20
86
4
59
34
2
0
62
1.08
4220654--4220702
24
2.0
24
84
8
62
20
2
12
65
1.35
4220757--4220797
19
2.2
19
86
8
57
24
4
4
65
1.32
4221274--4221316
19
2.4
18
81
11
52
41
0
32
25
1.56
4223109--4223159
25
2.0
25
100
0
102
35
19
19
25
1.95
4224852--4225071
105
2.1
104
80
12
249
30
30
15
23
1.96
4224920--4225071
52
2.9
52
86
2
207
29
29
17
23
1.97
4229263--4229295
15
2.2
15
94
0
57
51
15
15
18
1.77
4230613--4230651
15
2.7
15
84
4
53
35
12
2
48
1.55
4234430--4234551
58
2.0
59
81
7
138
54
2
4
38
1.33
4243846--4243870
8
3.1
8
100
0
50
12
0
0
88
0.53
4247849--4247880
14
2.3
14
100
0
64
31
18
12
37
1.88
4255163--4255253
46
2.0
46
91
0
146
46
6
8
38
1.61
4264618--4264660
21
2.0
21
95
0
77
34
9
23
32
1.87
4266117--4266155
16
2.3
17
91
8
62
38
0
0
61
0.96
4266264--4266311
23
2.1
23
92
0
78
33
14
6
45
1.70
4270444--4270487
23
1.9
23
81
9
54
52
2
11
34
1.50
4273663--4273709
24
2.0
23
84
12
60
34
0
4
61
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4284729--4284761
15
2.3
15
89
5
50
42
0
3
54
1.15
4294562--4294612
25
2.0
25
100
0
102
49
0
19
31
1.49
4296020--4296151
40
3.3
40
82
0
156
37
20
12
30
1.89
4297408--4297483
40
1.9
40
86
5
109
36
31
11
19
1.88
4306242--4306300
30
1.9
31
86
3
84
27
18
3
50
1.62
4306242--4306310
30
2.3
31
80
7
79
27
17
5
49
1.69
4307862--4308364
46
11.0
46
91
2
753
22
22
14
40
1.90
4308200--4308271
21
3.2
21
64
21
56
26
25
9
38
1.86
4307862--4308364
229
2.2
229
90
3
789
22
22
14
40
1.90
4310501--4310549
3
17.3
3
76
19
52
69
0
2
28
1.00
4310507--4310545
11
3.5
11
92
0
69
69
0
2
28
1.02
4310508--4310549
19
2.2
19
87
8
59
71
0
2
26
0.98
4310519--4310594
20
3.7
21
77
10
68
59
6
1
32
1.32
4316045--4316090
17
2.9
17
75
12
53
28
0
4
67
1.10
4316045--4316091
16
3.0
16
73
14
53
29
0
4
65
1.11
4321286--4321419
53
2.5
53
91
2
207
26
17
27
28
1.98
4345159--4345244
31
2.9
28
81
10
91
50
4
4
40
1.44
4345156--4345244
30
3.0
29
83
5
106
50
4
4
40
1.43
4347152--4347185
17
2.0
17
88
11
52
41
2
0
55
1.15
4361931--4361985
16
3.4
16
87
5
76
29
25
7
38
1.83
4363474--4363518
13
3.5
13
81
3
56
44
0
0
55
0.99
4364300--4364329
15
2.0
15
93
0
51
0
6
10
83
0.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4365133--4365168
9
3.9
9
88
3
54
0
25
0
75
0.81
4365137--4365170
12
2.9
12
91
4
52
0
23
0
76
0.79
4373948--4373983
5
7.0
5
87
6
54
36
0
2
61
1.11
4377665--4377712
3
15.3
3
83
16
62
29
0
0
70
0.87
4377672--4377709
14
2.8
13
92
7
67
28
0
0
71
0.87
4384050--4384143
44
2.2
43
81
7
109
51
8
6
34
1.58
4384907--4384939
11
2.8
12
81
9
50
30
3
6
60
1.36
4386412--4386440
4
7.2
4
100
0
58
75
0
24
0
0.80
4387203--4387313
47
2.4
47
84
6
154
25
16
23
35
1.95
4393664--4393692
4
7.2
4
100
0
58
75
0
24
0
0.80
4394455--4394565
47
2.4
47
84
6
154
25
16
23
35
1.95
4411265--4411314
25
2.0
25
85
11
68
16
8
2
74
1.15
4414497--4414662
91
1.8
91
83
7
221
40
8
12
38
1.74
4422326--4422365
19
2.1
19
86
9
55
60
7
0
32
1.25
4422775--4422814
19
2.1
19
86
9
55
42
0
2
55
1.13
4422775--4422843
32
2.2
30
80
12
77
40
1
1
56
1.17
4424920--4425000
31
2.7
29
80
12
76
51
9
13
24
1.71
4438343--4438392
23
2.2
23
96
0
91
64
6
12
18
1.47
4443192--4443216
5
5.0
5
100
0
50
40
0
0
60
0.97
4449193--4449247
10
5.7
10
72
8
51
32
3
1
61
1.24
4449192--4449247
29
1.9
29
89
7
87
32
3
1
62
1.23
4455475--4455518
16
2.5
18
85
10
56
47
0
11
40
1.39
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4458989--4459025
17
2.1
18
90
5
58
21
10
10
56
1.64
4459372--4459451
26
3.0
26
83
5
97
28
10
1
60
1.37
4459372--4459473
26
3.6
29
76
11
95
27
8
0
62
1.31
4462117--4462199
42
2.0
43
87
2
123
22
25
14
37
1.92
4462170--4462289
46
2.6
47
81
6
129
30
25
15
29
1.95
4462311--4462521
31
6.8
31
89
2
280
28
26
18
27
1.98
4462497--4462625
50
2.5
51
88
2
197
26
23
15
34
1.94
4472833--4472935
53
1.9
53
94
0
179
29
32
9
29
1.89
4476560--4476628
34
2.0
34
97
0
129
37
11
21
28
1.89
4478187--4478350
42
3.7
42
82
8
186
28
26
14
30
1.95
4478270--4478436
47
3.5
48
83
8
182
29
26
15
27
1.96
4478231--4478439
91
2.3
94
82
9
227
29
26
15
29
1.96
4478462--4478610
31
4.8
31
92
3
221
24
29
18
26
1.98
4478586--4478710
50
2.5
51
88
3
182
27
23
16
33
1.95
4486282--4486415
57
2.3
59
84
7
184
36
8
17
36
1.82
4488900--4488932
11
2.9
12
86
13
52
33
0
0
66
0.92
4489054--4489111
30
1.9
30
89
0
89
56
12
6
24
1.59
4489157--4489218
22
2.8
22
80
7
63
64
4
12
17
1.44
4489154--4489217
33
1.9
33
81
12
78
64
6
12
17
1.47
4501770--4501813
19
2.4
19
85
7
56
43
0
6
50
1.29
4501876--4501950
24
3.3
23
76
14
66
44
0
2
53
1.14
4502051--4502096
16
2.8
17
80
6
51
39
0
2
58
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4504731--4504781
26
2.0
26
92
0
84
19
3
11
64
1.41
4516223--4516294
27
2.7
27
97
0
135
23
25
31
19
1.98
4516792--4516818
11
2.5
11
100
0
54
48
14
0
37
1.45
4517061--4517092
3
10.7
3
100
0
64
0
34
0
65
0.93
4517586--4517675
46
2.0
46
95
0
162
52
20
2
25
1.58
4523577--4523622
3
15.3
3
100
0
92
32
0
0
67
0.91
4530775--4530856
35
2.4
34
84
9
107
47
1
1
50
1.16
4531223--4531268
19
2.4
19
82
13
58
45
2
0
52
1.13
4531223--4531270
18
2.5
20
76
16
55
45
2
0
52
1.12
4543365--4543583
111
2.0
111
88
1
332
34
12
10
42
1.77
4548210--4548236
13
2.1
13
100
0
54
29
7
0
62
1.22
4560394--4560632
119
2.0
120
97
0
453
25
12
18
43
1.85
4568865--4569202
168
2.0
168
100
0
676
26
10
21
41
1.86
4574230--4574279
11
4.7
11
82
9
68
30
32
0
38
1.58
4574222--4574279
20
2.7
21
84
10
73
31
29
0
39
1.57
4575426--4575534
21
5.1
21
82
4
83
35
22
22
20
1.96
4575426--4575534
42
2.5
42
79
2
119
35
22
22
20
1.96
4575905--4575962
15
3.8
15
88
2
89
51
12
0
36
1.39
4577232--4577263
5
6.2
5
96
3
55
56
0
0
43
0.99
4578701--4578734
7
4.9
7
100
0
68
26
0
14
58
1.36
4579203--4579612
116
3.5
116
95
0
721
40
3
9
46
1.54
4582634--4583172
126
4.3
126
90
0
801
27
21
17
33
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4583448--4583489
16
2.6
16
77
11
50
54
23
0
21
1.44
4586243--4586305
28
2.3
28
97
2
119
63
3
6
26
1.34
4591921--4591975
24
2.3
24
84
3
67
65
5
1
27
1.25
4591919--4591969
13
4.1
13
75
10
52
60
7
1
29
1.36
4592254--4592283
13
2.2
14
94
5
53
30
0
6
63
1.20
4595095--4595137
20
2.2
20
86
0
59
27
11
9
51
1.69
4599498--4599562
19
3.4
19
87
4
87
20
24
15
40
1.91
4602867--4602898
4
7.8
4
93
6
55
75
0
25
0
0.81
4604105--4604348
44
5.6
43
79
5
215
36
20
22
19
1.95
4604104--4604437
87
3.8
86
77
7
273
36
21
21
20
1.95

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328