Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr07 97507971 
Parameters: 2 7 7 80 10 50 1000
Length:  97507971

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   

This is table  137  of  328  ( 39316 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39818878--39819158
76
3.7
76
92
1
458
28
23
17
31
1.96
39818861--39819175
151
2.1
149
88
3
463
32
21
16
29
1.95
39827481--39827516
12
3.0
12
83
0
54
44
2
22
30
1.67
39831074--39831121
16
3.1
15
90
6
69
64
2
2
31
1.16
39831070--39831121
8
6.5
8
82
8
61
65
1
1
30
1.14
39831069--39831125
24
2.4
24
79
5
71
64
1
3
29
1.20
39831352--39831413
25
2.5
25
83
0
79
64
0
3
32
1.09
39831354--39831404
14
3.9
13
73
17
52
64
0
3
31
1.11
39831326--39831415
25
3.4
27
72
9
69
61
2
5
31
1.31
39831971--39832084
30
3.8
30
89
2
176
21
3
49
25
1.66
39831971--39832084
59
1.9
60
96
1
212
21
3
49
25
1.66
39836260--39836305
20
2.3
21
82
14
62
26
17
28
28
1.98
39841251--39841333
9
9.4
8
71
17
58
63
1
4
30
1.22
39841231--39841335
18
5.7
18
76
15
76
63
1
4
29
1.25
39841437--39841469
11
3.1
11
91
4
50
30
3
0
66
1.06
39841601--39841634
17
2.0
17
100
0
68
47
5
0
47
1.26
39841653--39841700
20
2.3
22
82
7
64
22
6
0
70
1.09
39842528--39842566
20
2.0
20
89
0
60
46
0
0
53
1.00
39846900--39846924
6
4.2
6
100
0
50
68
16
0
16
1.22
39850606--39850710
29
3.6
29
77
2
86
25
33
17
23
1.96
39850644--39850766
58
2.1
59
87
3
178
25
30
15
28
1.96
39850665--39850766
29
3.5
29
95
0
186
26
29
14
29
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39854889--39854917
9
3.3
9
95
4
51
48
6
0
44
1.29
39858360--39858484
45
2.8
45
83
6
164
44
15
19
21
1.87
39865699--39865738
21
2.0
21
90
5
64
22
30
37
10
1.87
39866774--39867088
47
6.6
46
73
9
183
24
27
19
28
1.98
39866884--39867091
94
2.2
94
83
7
260
23
28
19
28
1.98
39866875--39867091
46
4.6
47
75
11
176
23
28
19
29
1.98
39876544--39876896
47
7.4
49
70
11
184
24
28
18
28
1.98
39876697--39876860
46
3.6
44
76
10
143
22
28
19
29
1.98
39877244--39877300
30
1.9
30
85
7
80
29
26
8
35
1.87
39880146--39880316
93
1.8
93
96
0
315
27
29
22
20
1.98
39880138--39880318
46
3.9
46
81
9
233
27
29
21
20
1.98
39882683--39882771
30
3.0
30
80
8
101
57
15
16
10
1.65
39882683--39882762
15
5.4
15
80
7
92
58
13
17
10
1.62
39882694--39882771
15
5.2
15
78
9
79
56
15
16
11
1.67
39885682--39885853
93
1.8
93
96
0
317
27
30
22
20
1.98
39885674--39885849
46
3.8
46
81
10
232
28
29
21
20
1.98
39889916--39889957
19
2.3
19
83
4
50
47
0
4
47
1.23
39891182--39891214
11
3.1
11
91
4
50
39
0
6
54
1.25
39893243--39893322
23
3.5
22
83
8
97
33
15
17
33
1.91
39893226--39893334
46
2.4
45
81
1
137
34
17
14
33
1.90
39895180--39895256
19
4.0
21
75
16
69
50
0
3
45
1.20
39901808--39901835
2
14.0
2
100
0
56
50
0
50
0
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39901887--39901911
4
6.2
4
100
0
50
52
24
0
24
1.48
39910420--39910468
21
2.3
21
100
0
98
55
0
34
10
1.34
39915348--39915527
67
2.8
64
73
9
168
29
16
30
23
1.96
39916610--39916636
2
13.5
2
100
0
54
48
0
0
51
1.00
39921901--39921991
37
2.4
37
92
1
155
24
32
18
24
1.97
39922087--39922303
47
4.5
47
89
5
301
29
31
9
29
1.88
39922081--39922304
96
2.3
97
85
6
312
29
30
8
30
1.88
39925415--39925722
29
10.6
29
95
1
553
27
31
13
27
1.94
39925415--39925722
147
2.1
145
94
2
553
27
31
13
27
1.94
39927807--39927897
37
2.4
37
92
1
155
24
32
18
24
1.97
39927993--39928212
49
4.5
49
90
4
320
29
30
9
30
1.88
39931551--39931620
28
2.5
28
88
4
97
27
15
28
28
1.96
39948205--39948231
2
13.5
2
100
0
54
51
0
0
48
1.00
39949976--39950124
44
3.5
43
75
9
142
28
25
18
27
1.98
39962474--39962518
22
2.0
22
91
0
72
33
2
15
48
1.57
39967071--39967115
22
2.0
22
91
0
72
33
2
15
48
1.57
39969316--39969355
3
13.3
3
89
0
62
67
27
0
5
1.11
39971202--39971275
31
2.4
31
86
0
94
44
9
6
39
1.63
39971852--39971937
45
1.9
45
90
0
136
32
3
10
53
1.52
39977624--39977684
25
2.4
25
86
5
79
26
22
4
45
1.72
39977843--39977880
12
3.1
12
88
11
51
13
26
0
60
1.33
39978561--39978640
40
2.0
40
95
0
142
27
25
15
32
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39983645--39983836
48
4.0
48
78
3
163
23
16
26
32
1.96
39983649--39983827
96
1.9
96
82
2
225
23
17
25
33
1.96
39990919--39991055
48
2.9
48
78
2
132
18
20
29
31
1.96
39990915--39991093
96
1.9
96
82
2
225
20
20
27
31
1.97
39996040--39996098
25
2.4
24
83
10
75
67
6
8
16
1.38
39999115--39999158
17
2.5
18
82
14
56
45
2
0
52
1.13
39999131--39999258
68
1.9
69
90
1
204
40
3
3
51
1.39
40008042--40008151
27
4.1
26
82
10
132
16
23
22
37
1.94
40008042--40008151
54
2.1
53
87
5
159
16
23
22
37
1.94
40011508--40011584
12
7.0
11
73
17
63
77
1
3
16
0.98
40011508--40011584
6
14.2
5
79
12
57
77
1
3
16
0.98
40023611--40023742
29
4.6
29
88
0
165
29
15
31
24
1.95
40031515--40031540
13
2.0
13
100
0
52
15
38
30
15
1.88
40041244--40041298
3
18.7
3
96
3
103
30
0
0
69
0.89
40042685--40042926
89
2.7
89
81
3
299
22
24
19
33
1.97
40046267--40046620
43
8.2
43
86
2
460
26
16
25
31
1.96
40046580--40046813
56
4.2
56
84
3
301
29
14
23
33
1.93
40046565--40046813
112
2.2
111
84
2
345
28
13
22
34
1.93
40050164--40050291
47
2.6
48
79
7
145
24
32
17
25
1.97
40053883--40054096
40
5.3
40
87
2
261
25
22
27
24
2.00
40064639--40064708
25
2.9
24
77
10
72
77
1
15
5
1.03
40065867--40065931
29
2.2
29
94
0
112
30
16
27
24
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40072535--40072597
25
2.5
24
80
7
72
74
1
17
6
1.10
40073762--40073826
29
2.2
29
94
0
112
30
16
27
24
1.97
40076880--40077050
93
1.8
93
92
0
288
21
21
29
28
1.98
40076884--40077055
46
3.7
46
76
13
190
21
20
29
28
1.98
40083959--40084129
93
1.8
93
94
0
306
21
22
29
27
1.99
40083963--40084134
46
3.7
46
79
13
208
21
22
28
27
1.99
40091034--40091203
46
3.7
46
77
15
199
21
21
28
28
1.99
40099831--40099925
34
2.8
33
73
7
82
24
18
30
26
1.98
40102914--40103171
45
5.9
45
79
8
264
32
27
16
23
1.96
40106972--40107002
15
2.1
15
93
0
53
22
0
0
77
0.77
40111299--40111323
11
2.3
11
100
0
50
64
0
28
8
1.22
40112693--40112762
19
4.1
18
70
22
60
22
2
20
54
1.58
40112693--40112765
32
2.3
32
81
9
87
24
2
19
53
1.58
40117540--40117646
28
3.8
28
92
0
160
29
25
10
34
1.89
40121074--40121295
40
5.6
40
88
1
270
25
27
22
23
2.00
40129912--40129996
39
2.2
38
81
6
100
25
28
22
23
1.99
40129934--40130141
38
5.5
39
80
8
207
25
28
22
24
1.99
40129934--40130141
75
2.7
77
82
8
246
25
28
22
24
1.99
40134803--40134953
40
3.8
40
77
13
134
27
23
26
22
2.00
40134840--40134969
40
3.2
40
77
4
138
24
23
27
23
2.00
40139252--40139285
2
17.0
2
100
0
68
50
0
0
50
1.00
40139669--40139701
2
16.0
2
93
6
57
48
3
0
48
1.17
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40142835--40142931
48
2.0
47
84
9
126
12
14
8
64
1.48
40150943--40150992
25
2.0
25
96
0
91
24
22
20
34
1.97
40151547--40151578
16
2.0
16
93
0
55
59
0
0
40
0.97
40154689--40154735
20
2.3
20
85
7
60
57
4
0
38
1.18
40154994--40155055
21
3.0
21
72
25
60
37
6
0
56
1.25
40155060--40155114
21
2.6
22
80
8
69
32
3
0
63
1.12
40155055--40155116
10
6.0
10
72
7
52
33
3
1
61
1.22
40156063--40156122
30
2.0
30
100
0
120
30
0
33
36
1.58
40163962--40164048
42
2.1
42
84
0
111
43
2
6
47
1.42
40165580--40165624
3
15.0
3
100
0
90
33
0
0
66
0.92

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328