Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr07 97507971 
Parameters: 2 7 7 80 10 50 1000
Length:  97507971

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   

This is table  315  of  328  ( 39316 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93432102--93432212
47
2.4
47
84
6
154
35
23
16
25
1.95
93432969--93433002
4
8.2
4
90
3
50
0
26
0
73
0.83
93439358--93439468
47
2.4
47
84
6
154
35
23
16
25
1.95
93451404--93451512
37
3.0
35
75
15
89
41
2
4
51
1.37
93451552--93451592
19
2.1
19
86
4
55
48
2
0
48
1.14
93456756--93456789
17
1.9
18
88
5
52
23
2
2
70
1.15
93456870--93456915
23
2.0
23
95
0
83
21
28
8
41
1.83
93459676--93459846
93
1.8
93
96
0
315
28
28
21
21
1.99
93459671--93459843
46
3.7
46
78
13
210
28
27
21
21
1.99
93460270--93460329
30
2.0
30
83
0
75
35
23
5
36
1.77
93461426--93461567
49
2.9
49
80
2
160
30
30
17
21
1.96
93464987--93465047
25
2.4
25
86
5
88
36
18
8
37
1.80
93465149--93465345
62
3.2
62
93
0
322
49
5
5
40
1.47
93465851--93465890
9
4.3
9
83
3
53
37
0
5
57
1.21
93467034--93467065
15
2.1
15
94
0
55
68
9
6
15
1.36
93473783--93473839
25
2.3
25
79
8
62
3
22
1
71
1.10
93477594--93477619
1
26.0
1
100
0
52
0
0
0
100
0.00
93488199--93488309
47
2.4
47
84
6
154
35
23
16
25
1.95
93495409--93495519
47
2.4
47
84
6
154
35
23
16
25
1.95
93499951--93500061
47
2.4
47
84
6
154
35
23
16
25
1.95
93502090--93502164
21
3.6
21
98
0
141
38
14
8
38
1.76
93507012--93507044
4
8.2
4
93
0
57
51
27
0
21
1.48
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93507014--93507045
16
2.0
16
100
0
64
50
31
0
18
1.48
93507949--93507993
20
2.2
21
92
4
74
37
4
15
42
1.67
93509981--93510044
29
2.2
30
82
2
76
50
3
1
45
1.27
93512289--93512322
18
1.9
17
88
5
50
52
2
0
44
1.16
93520241--93520280
21
2.0
19
85
9
53
65
2
0
32
1.06
93521441--93521566
19
6.9
18
88
5
175
36
15
11
37
1.83
93521441--93521558
35
3.3
35
95
3
200
36
14
11
37
1.83
93521441--93521563
17
6.8
18
87
10
96
36
14
11
37
1.82
93521960--93522673
207
3.5
206
93
0
1133
29
23
17
29
1.97
93522798--93523088
84
3.4
84
85
4
415
23
21
23
31
1.98
93524021--93524090
1
70.0
1
73
0
59
2
10
0
87
0.65
93524021--93524090
30
2.3
30
88
9
106
2
10
0
87
0.65
93529798--93529914
17
6.5
18
88
5
166
36
14
11
37
1.82
93529798--93529914
35
3.3
35
95
3
198
36
14
11
37
1.82
93532463--93532532
31
2.2
30
82
12
86
55
0
4
40
1.19
93534212--93534266
18
3.2
17
85
12
76
67
0
0
32
0.91
93534205--93534267
17
3.8
16
76
17
65
65
0
0
34
0.93
93536337--93536366
2
15.0
2
100
0
60
0
50
0
50
1.00
93537396--93537423
13
2.2
13
100
0
56
53
0
35
10
1.36
93547374--93547460
18
4.9
18
85
5
124
33
14
22
28
1.94
93547375--93547460
34
2.5
35
88
3
129
33
15
22
29
1.94
93550724--93550760
20
1.9
20
88
5
58
27
2
8
62
1.37
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93554199--93554338
70
2.0
71
85
5
194
44
5
14
35
1.69
93558836--93558981
74
2.0
74
100
0
292
36
16
11
35
1.85
93560639--93560704
33
2.0
33
96
0
123
43
12
1
42
1.51
93565479--93565509
16
1.9
16
100
0
62
61
0
12
25
1.32
93569154--93569264
47
2.4
47
84
6
154
35
23
16
25
1.95
93571475--93571517
15
2.8
15
78
3
50
32
2
0
65
1.06
93571479--93571528
26
1.9
26
83
0
64
34
2
0
64
1.05
93571727--93571776
26
1.9
26
84
8
66
32
30
2
36
1.69
93573801--93573849
3
16.3
3
100
0
98
32
0
0
67
0.91
93573834--93573895
23
2.9
21
83
11
65
35
3
4
56
1.37
93573973--93574050
41
1.9
40
84
7
104
34
1
2
61
1.18
93574002--93574036
16
2.2
16
90
10
54
31
0
0
68
0.90
93574018--93574131
23
5.0
22
76
17
81
35
5
2
57
1.35
93574018--93574142
46
2.6
49
82
9
152
35
4
2
57
1.33
93574213--93574308
22
4.3
22
77
18
85
32
3
5
59
1.35
93574443--93574514
26
2.9
25
71
6
65
34
9
6
48
1.63
93574492--93574535
21
2.1
21
87
4
63
34
9
6
50
1.61
93576592--93576624
17
1.9
18
88
11
52
48
0
9
42
1.35
93576601--93576644
21
2.0
21
83
12
54
45
4
2
47
1.35
93576800--93576875
37
2.1
37
100
0
152
28
15
2
52
1.56
93580999--93581037
21
1.9
20
94
5
69
7
12
0
79
0.93
93588364--93588440
38
2.0
38
97
0
145
19
19
7
53
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93589055--93589083
2
14.5
2
100
0
58
51
0
0
48
1.00
93611225--93611336
47
2.4
47
79
5
129
34
22
16
25
1.95
93612082--93612116
4
9.2
4
87
12
56
0
25
0
74
0.82
93612083--93612125
19
2.3
18
81
14
52
2
20
2
74
1.04
93614180--93614259
19
4.3
18
75
10
72
37
0
1
61
1.04
93615475--93615508
2
17.0
2
100
0
68
50
0
0
50
1.00
93619768--93619799
3
10.7
3
100
0
64
0
0
65
34
0.93
93623593--93623772
99
1.8
97
80
11
213
46
3
3
45
1.39
93628882--93629040
80
2.0
79
87
3
230
42
13
15
27
1.85
93641086--93641419
166
2.0
167
94
0
580
37
15
7
39
1.76
93641531--93641582
10
5.1
10
75
13
52
23
1
3
71
1.13
93641508--93641567
19
3.1
19
77
13
59
36
3
3
56
1.32
93641520--93641594
20
3.9
19
75
18
57
28
1
2
68
1.12
93641540--93641594
19
2.9
19
82
15
69
25
0
3
70
1.03
93641513--93641593
39
2.1
39
81
2
92
28
2
3
65
1.22
93650491--93650582
30
3.1
30
85
1
114
38
17
10
33
1.85
93651118--93651169
20
2.6
20
96
0
95
57
7
5
28
1.50
93652657--93652828
93
1.8
93
94
0
308
27
30
21
20
1.98
93652649--93652824
46
3.8
46
81
10
214
28
29
21
21
1.98
93656626--93656661
17
2.1
17
100
0
72
36
16
0
47
1.47
93658188--93658359
93
1.8
93
94
0
308
27
30
21
20
1.98
93658180--93658355
46
3.8
46
81
10
214
28
29
21
21
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93659599--93659684
43
2.0
43
100
0
172
39
25
13
20
1.90
93672610--93672648
20
2.0
20
90
10
62
53
0
2
43
1.14
93679938--93680002
17
4.2
14
74
21
51
63
4
0
32
1.15
93681302--93681335
17
2.1
16
94
5
59
73
2
0
23
0.97
93681463--93681505
9
4.9
9
94
2
70
34
0
0
65
0.93
93681457--93681501
17
2.6
16
86
13
63
33
0
0
66
0.92
93681714--93682041
44
8.0
42
80
10
360
39
11
7
41
1.70
93684973--93685014
16
2.8
15
82
7
50
66
2
0
30
1.04
93684973--93685030
30
1.9
30
86
6
82
65
1
3
29
1.19
93688719--93688745
14
1.9
14
100
0
54
40
14
14
29
1.86
93691524--93691705
46
4.0
46
90
1
258
21
23
14
40
1.91
93695092--93695302
64
3.2
64
62
20
151
29
25
18
26
1.98
93695058--93695342
137
2.1
137
97
0
534
31
24
18
24
1.97
93697133--93697268
26
5.2
26
94
0
236
36
25
5
33
1.78
93698052--93698120
27
2.5
28
75
15
74
50
7
5
36
1.54
93698092--93698137
20
2.2
21
88
3
67
52
6
8
32
1.58
93698285--93698350
24
2.8
23
78
14
71
54
7
3
34
1.44
93698285--93698354
11
6.0
11
69
12
50
54
8
2
34
1.46
93698723--93698784
11
5.0
13
74
16
51
58
1
8
32
1.37
93698762--93698802
22
2.0
20
86
13
57
68
0
0
31
0.90
93700744--93700803
24
2.6
22
79
7
66
65
0
1
33
1.03
93707258--93707283
11
2.4
11
100
0
52
30
0
7
61
1.24
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93707301--93707337
20
1.9
19
89
10
58
37
0
8
54
1.30
93711559--93711625
33
2.0
33
100
0
134
38
17
17
25
1.92
93715838--93715866
9
3.0
10
90
10
51
10
0
0
89
0.48
93722370--93722398
7
4.1
7
100
0
58
55
0
17
27
1.42
93724936--93724981
17
2.8
17
84
15
53
63
0
0
36
0.95
93724936--93724981
16
2.9
16
77
22
53
63
0
0
36
0.95
93725607--93725640
18
1.9
18
88
5
52
29
0
5
64
1.17
93727024--93727060
20
1.9
20
88
5
58
37
5
0
56
1.22
93728980--93729016
16
2.4
16
95
4
67
64
0
0
35
0.94
93749438--93749501
32
2.0
32
96
0
119
20
9
14
56
1.65

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328