Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr07 97507971 
Parameters: 2 7 7 80 10 50 1000
Length:  97507971

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   

This is table  36  of  328  ( 39316 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10575545--10575720
46
3.8
46
80
15
218
28
28
21
21
1.98
10578464--10578499
14
2.6
14
86
0
54
25
8
30
36
1.85
10583504--10583574
29
2.4
29
77
9
83
67
5
7
19
1.35
10588543--10588572
2
15.0
2
92
0
51
46
0
3
50
1.18
10590883--10590969
3
29.0
3
100
0
174
33
0
0
66
0.92
10596229--10596404
46
3.8
46
79
12
216
20
21
29
28
1.98
10596226--10596397
93
1.8
93
96
0
317
20
21
29
27
1.98
10603796--10603971
46
3.8
46
79
12
216
20
21
29
28
1.98
10603793--10603964
93
1.8
93
96
0
317
20
21
29
27
1.98
10605774--10606618
206
4.1
206
91
0
1325
30
20
17
31
1.96
10614639--10614669
15
2.1
15
100
0
62
6
38
0
54
1.26
10614713--10614762
15
3.5
14
79
15
50
42
8
24
26
1.82
10621226--10621269
19
2.4
18
84
3
52
75
15
9
0
1.05
10623821--10623856
13
2.8
14
84
16
51
27
25
0
47
1.52
10623808--10623848
18
2.2
19
87
12
59
29
24
0
46
1.53
10623971--10624105
39
3.4
38
73
8
101
28
28
20
23
1.99
10624345--10624383
18
2.1
19
90
4
62
48
10
0
41
1.37
10627489--10627524
6
6.0
6
93
0
54
11
0
0
88
0.50
10630239--10630274
13
2.8
14
84
16
51
27
25
0
47
1.52
10630226--10630266
18
2.2
19
87
12
59
29
24
0
46
1.53
10630389--10630523
39
3.4
38
73
8
101
28
28
20
23
1.99
10630768--10630806
18
2.1
19
90
4
62
48
10
0
41
1.37
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10632114--10632155
15
2.9
15
80
16
52
52
0
0
47
1.00
10633894--10633918
1
25.0
1
100
0
50
0
0
0
100
0.00
10636611--10636646
13
2.8
14
84
16
51
27
25
0
47
1.52
10636598--10636638
18
2.2
19
87
12
59
29
24
0
46
1.53
10637134--10637172
18
2.1
19
90
4
62
48
10
0
41
1.37
10638484--10638520
13
2.6
14
87
12
58
59
0
0
40
0.97
10640265--10640299
1
35.0
1
88
0
52
5
0
0
94
0.32
10643002--10643037
13
2.8
14
84
16
51
27
25
0
47
1.52
10642989--10643029
18
2.2
19
87
12
59
29
24
0
46
1.53
10643152--10643286
39
3.4
38
73
8
101
28
28
20
23
1.99
10643526--10643564
18
2.1
19
90
4
62
48
10
0
41
1.37
10646128--10646174
20
2.3
21
85
3
60
29
4
17
48
1.65
10650425--10650470
3
15.0
3
86
4
65
0
32
2
65
1.05
10655122--10655157
16
2.2
16
90
0
54
41
25
2
30
1.69
10656173--10656252
33
2.4
33
80
0
88
30
6
41
22
1.78
10656369--10656519
51
3.0
51
91
1
223
25
9
29
35
1.88
10658541--10658570
14
2.1
14
93
0
51
30
3
0
66
1.07
10659323--10659367
22
2.0
22
91
0
72
42
11
11
35
1.76
10659755--10659779
12
2.1
12
100
0
50
36
32
8
24
1.84
10663137--10663201
13
4.9
13
70
10
60
43
18
1
36
1.60
10663141--10663309
40
4.2
40
82
0
176
40
17
1
40
1.60
10663138--10663275
27
5.2
26
68
6
80
39
21
0
39
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10664532--10664583
21
2.5
22
73
17
56
36
3
1
57
1.28
10666918--10666947
12
2.5
12
94
0
51
53
0
10
36
1.35
10672880--10672907
14
2.0
14
100
0
56
42
7
14
35
1.73
10674696--10674737
17
2.4
18
88
11
61
21
7
0
71
1.09
10674697--10674748
18
2.8
18
82
11
61
23
7
0
69
1.14
10692475--10692505
16
1.9
16
93
0
53
58
0
0
41
0.98
10692719--10692859
63
2.3
63
86
1
194
34
35
5
24
1.79
10697972--10698046
25
3.1
25
65
18
59
32
28
5
34
1.80
10705715--10705766
26
2.0
26
88
0
77
44
1
3
50
1.31
10706844--10706875
16
2.0
16
100
0
64
37
18
0
43
1.51
10707716--10707822
10
11.4
9
71
20
69
65
1
1
30
1.14
10707728--10707822
10
9.7
10
74
12
72
64
2
2
31
1.17
10707712--10707823
19
5.9
18
76
13
84
65
1
1
31
1.13
10707747--10707822
29
2.5
32
83
12
99
63
1
1
34
1.11
10708008--10708065
19
3.1
17
76
18
53
25
10
1
62
1.37
10708008--10708062
20
2.8
19
74
17
51
23
9
1
65
1.31
10717156--10717194
16
2.4
16
86
0
51
25
2
5
66
1.25
10717166--10717205
8
5.0
8
96
0
71
27
0
0
72
0.85
10721189--10721227
17
2.2
19
86
9
55
79
2
12
5
1.00
10723661--10723686
7
3.7
7
100
0
52
69
0
0
30
0.89
10724064--10724105
17
2.3
17
88
12
57
78
2
7
11
1.04
10727745--10727915
46
4.0
41
81
15
181
38
15
24
21
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10727788--10727960
46
3.8
46
88
1
231
40
15
23
20
1.90
10737964--10738042
24
3.3
24
66
13
72
36
7
8
46
1.64
10737968--10738064
48
2.0
48
97
0
185
35
11
10
43
1.75
10739602--10739673
32
2.3
31
81
9
83
33
11
15
40
1.82
10740071--10740302
125
1.9
125
85
0
320
48
21
6
23
1.72
10741479--10741521
21
2.0
21
86
4
59
53
0
0
46
1.00
10742112--10742150
14
2.8
14
92
0
60
30
20
10
38
1.86
10742450--10742512
30
2.1
30
90
0
99
23
3
14
58
1.50
10742635--10742665
11
2.8
11
90
0
53
67
0
0
32
0.91
10742902--10742940
19
2.2
19
86
9
55
41
2
0
56
1.13
10742911--10742967
28
2.1
27
86
3
78
42
1
0
56
1.10
10742941--10743017
20
3.8
19
70
21
50
57
1
2
38
1.21
10743399--10743471
25
3.0
25
86
6
87
71
4
10
13
1.28
10746573--10746615
20
2.0
22
86
8
63
48
0
20
30
1.50
10747304--10747476
33
5.3
33
80
3
152
34
10
22
31
1.89
10747435--10747497
33
1.9
33
83
6
83
25
15
31
26
1.96
10761330--10761363
17
2.0
17
88
11
52
52
2
0
44
1.16
10773083--10773212
21
6.3
21
65
11
65
13
20
14
50
1.77
10773096--10773190
42
2.3
41
90
1
145
13
22
15
48
1.80
10777523--10777730
102
2.0
102
95
0
371
44
12
11
32
1.77
10780844--10780909
22
3.0
21
85
14
82
42
3
4
50
1.38
10784885--10785023
58
2.4
58
93
2
235
31
19
25
23
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10787691--10787853
70
2.3
71
98
1
319
19
28
17
34
1.94
10787691--10787887
70
2.8
70
90
4
249
20
28
17
33
1.95
10790499--10790661
71
2.3
71
98
1
319
19
28
17
34
1.94
10790499--10790695
71
2.8
70
90
4
249
20
28
17
33
1.95
10798076--10798239
71
2.3
71
100
0
328
18
28
17
35
1.94
10798076--10798273
71
2.8
70
91
3
258
20
28
17
33
1.95
10804078--10804114
10
3.8
10
89
3
58
16
8
0
75
1.02
10804075--10804114
15
2.8
14
81
7
53
17
7
0
75
1.03
10807841--10807914
37
2.0
37
97
0
139
16
28
8
47
1.75
10808506--10808559
23
2.4
24
78
12
60
33
0
3
62
1.12
10809212--10809237
2
13.0
2
100
0
52
50
0
0
50
1.00
10813383--10813443
17
3.7
16
78
8
59
24
18
22
34
1.96
10814098--10814147
13
3.8
13
89
0
82
24
12
8
56
1.62
10814092--10814154
26
2.4
26
94
0
117
20
14
6
58
1.57
10814092--10814154
13
4.8
13
84
0
81
20
14
6
58
1.57
10815585--10815621
19
1.9
20
88
5
58
51
5
8
35
1.55
10815985--10816017
2
16.5
2
100
0
66
51
0
0
48
1.00
10816052--10816097
17
2.8
17
80
9
51
69
4
23
2
1.17
10816327--10816365
16
2.5
17
80
19
50
48
15
0
35
1.45
10817013--10817106
13
7.4
12
68
22
59
2
25
3
69
1.15
10817040--10817103
25
2.8
24
78
19
66
1
26
4
67
1.19
10817019--10817094
22
3.6
22
69
27
58
2
26
3
67
1.22
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10824105--10824130
13
2.0
13
100
0
52
23
15
23
38
1.92
10824901--10824926
3
8.7
3
100
0
52
30
0
0
69
0.89
10827589--10827633
24
1.9
23
86
13
65
44
11
2
42
1.52
10827642--10827673
10
3.1
10
95
4
55
28
0
3
68
1.04
10835269--10835340
35
2.1
35
100
0
144
30
13
8
47
1.73
10838416--10838463
25
1.9
25
83
8
62
37
12
45
4
1.61
10842241--10842289
24
2.0
26
88
8
75
30
4
0
65
1.11
10842241--10842301
26
2.5
23
84
10
68
29
3
0
67
1.07
10845932--10845969
20
1.9
20
84
10
51
42
13
23
21
1.88
10847868--10848007
46
3.0
46
86
2
183
40
14
23
21
1.90

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328