Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr07 97507971 
Parameters: 2 7 7 80 10 50 1000
Length:  97507971

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   

This is table  12  of  328  ( 39316 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3633103--3633138
16
2.2
17
90
9
58
83
0
16
0
0.65
3634156--3634186
13
2.4
13
100
0
62
12
6
6
74
1.21
3633990--3634443
86
5.1
86
80
10
491
25
16
19
38
1.93
3634094--3634448
186
1.9
186
88
4
536
25
16
20
37
1.93
3634486--3634921
75
5.9
75
86
6
613
31
15
19
33
1.93
3634374--3634921
221
2.5
217
89
6
814
31
15
20
32
1.94
3634374--3634945
147
4.0
143
85
7
671
30
15
20
33
1.94
3635021--3635053
14
2.4
14
94
0
57
18
12
6
63
1.48
3634859--3635395
89
6.0
90
80
6
485
27
16
18
37
1.92
3634880--3635386
176
2.9
177
80
7
489
28
16
19
35
1.93
3636084--3636137
18
3.3
18
71
28
66
20
50
7
22
1.73
3636074--3636172
30
3.3
30
92
0
162
24
50
6
19
1.70
3636643--3636772
23
5.5
24
75
9
88
34
6
3
55
1.43
3636657--3636778
25
5.0
26
68
16
82
36
5
4
54
1.44
3636737--3636848
29
4.0
27
73
15
88
31
6
4
58
1.43
3636793--3636859
25
2.9
23
78
10
73
29
5
5
58
1.46
3636804--3636875
25
2.8
25
77
10
67
30
5
4
59
1.39
3636921--3636976
25
2.3
24
79
14
62
37
16
3
42
1.65
3644295--3644338
17
2.6
17
82
10
56
54
20
4
20
1.62
3653049--3653087
19
2.0
20
90
5
62
5
12
17
64
1.46
3655613--3655711
33
3.0
33
93
0
171
31
41
10
17
1.82
3657710--3657749
14
2.8
14
92
3
62
27
15
17
40
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3660881--3660921
18
2.2
18
87
12
57
24
2
7
65
1.30
3661537--3661562
11
2.4
11
100
0
52
88
0
11
0
0.52
3665348--3665376
5
5.8
5
100
0
58
62
0
37
0
0.96
3668314--3668346
15
2.1
16
88
5
50
27
15
6
51
1.66
3669411--3669446
2
18.5
2
94
5
65
50
0
0
50
1.00
3673498--3673534
18
2.1
18
90
5
58
67
5
0
27
1.12
3674935--3675176
134
1.8
134
88
1
378
33
19
18
28
1.95
3684018--3684309
134
2.2
134
83
3
356
33
19
16
30
1.94
3686773--3686817
15
3.2
14
82
17
58
31
0
4
64
1.13
3688623--3688655
15
2.1
16
88
5
50
27
15
6
51
1.66
3689720--3689755
2
18.5
2
94
5
65
50
0
0
50
1.00
3693807--3693843
18
2.1
18
90
5
58
67
5
0
27
1.12
3695244--3695485
134
1.8
134
88
1
378
33
19
18
28
1.95
3703874--3703960
43
2.0
43
95
0
156
31
14
17
36
1.90
3708434--3708509
39
1.9
39
86
5
109
36
6
15
40
1.74
3711356--3711398
21
2.0
21
90
0
68
34
23
2
39
1.67
3711803--3711863
31
2.0
31
93
0
104
39
8
6
45
1.60
3720434--3720497
31
2.0
32
82
8
78
62
3
6
28
1.34
3724232--3724257
12
2.2
12
100
0
52
30
11
7
50
1.67
3728445--3728481
18
2.0
20
89
10
60
43
0
0
56
0.99
3728903--3728972
34
2.1
34
83
5
88
45
8
10
35
1.68
3738075--3738147
37
2.0
37
89
5
112
49
0
10
39
1.38
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3749468--3749513
21
2.4
18
89
10
65
71
2
0
26
0.97
3753579--3753619
9
4.6
9
87
0
64
2
43
0
53
1.13
3753774--3753813
21
1.9
21
90
10
64
15
35
10
40
1.80
3753763--3753821
21
2.6
24
71
20
63
15
40
6
37
1.74
3756550--3756601
22
2.3
23
80
12
63
38
5
3
51
1.44
3758220--3758253
13
2.6
13
100
0
68
44
0
5
50
1.26
3770684--3770725
20
2.1
20
95
0
75
33
9
26
30
1.88
3771132--3771179
16
2.8
17
81
6
53
33
0
0
66
0.92
3780950--3780980
15
2.1
14
94
5
53
35
12
22
29
1.91
3787536--3787581
18
2.5
19
86
13
62
56
15
0
28
1.39
3789090--3789297
72
2.8
73
82
7
201
37
12
24
25
1.91
3789090--3789377
75
3.9
75
79
9
284
37
11
25
25
1.89
3793709--3793758
19
2.7
19
76
20
61
38
8
0
54
1.30
3803469--3803533
29
2.2
30
88
5
96
55
12
0
32
1.37
3803956--3803989
17
2.1
16
88
5
50
35
8
2
52
1.47
3807665--3807690
12
2.2
12
100
0
52
15
7
26
50
1.71
3816761--3817326
299
1.9
295
81
7
671
38
8
15
36
1.79
3819110--3819143
2
18.0
2
88
11
54
52
0
0
47
1.00
3822254--3822296
18
2.3
19
96
4
79
76
0
9
13
1.01
3834460--3834493
17
2.0
17
88
11
52
58
0
0
41
0.98
3834774--3834798
13
1.9
13
100
0
50
0
0
8
92
0.40
3846526--3846550
13
1.9
13
100
0
50
92
8
0
0
0.40
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3848702--3848782
21
3.8
20
69
20
58
35
0
3
60
1.15
3848702--3848773
21
3.3
21
74
20
60
37
0
4
58
1.18
3857529--3857745
113
1.9
113
100
0
434
41
21
4
31
1.73
3862565--3862623
22
2.8
20
76
16
57
45
5
1
47
1.34
3863171--3863212
2
21.0
2
100
0
84
50
0
0
50
1.00
3864624--3864691
32
2.1
32
81
10
77
23
4
16
55
1.58
3864687--3864759
32
2.5
27
76
19
83
26
4
19
50
1.65
3864700--3864760
32
1.9
32
93
0
104
27
4
18
49
1.68
3865750--3865798
22
2.2
22
96
0
89
28
4
20
46
1.68
3865713--3865844
68
1.9
68
92
0
219
27
6
22
43
1.76
3866252--3866321
29
2.4
29
85
2
97
42
10
1
45
1.46
3866255--3866321
14
4.7
15
80
7
59
41
10
1
46
1.47
3871108--3871152
23
2.0
23
82
8
56
57
2
0
40
1.11
3880601--3880642
21
2.0
21
100
0
84
14
23
23
38
1.92
3881943--3881976
7
4.9
7
100
0
68
14
58
0
26
1.36
3886646--3886717
18
4.0
18
69
3
56
34
15
12
37
1.85
3886845--3886895
6
8.5
6
88
0
66
41
15
25
17
1.89
3887984--3888020
18
2.0
19
89
5
58
59
0
5
35
1.20
3889773--3889820
16
3.0
16
96
0
87
12
6
41
39
1.68
3890802--3890834
17
2.0
16
94
5
57
30
3
0
66
1.06
3892586--3892635
24
2.1
24
100
0
100
30
12
32
26
1.92
3898419--3898469
15
3.1
15
81
18
57
72
1
1
23
1.05
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3903677--3903849
46
3.8
46
76
15
196
20
20
30
28
1.98
3911127--3911155
14
2.1
14
100
0
58
13
20
20
44
1.85
3911252--3911427
46
3.8
46
79
12
207
19
21
30
28
1.98
3911249--3911420
93
1.8
93
94
0
308
20
21
30
27
1.98
3913308--3913366
27
2.2
27
80
17
70
57
3
0
38
1.15
3916459--3916691
117
2.0
117
99
0
457
27
9
34
29
1.87
3921679--3921718
5
8.6
5
78
15
50
77
0
2
20
0.88
3921681--3921716
19
1.9
19
94
5
65
75
0
2
22
0.94
3921676--3921718
8
4.9
9
86
13
63
79
0
2
18
0.85
3927552--3927584
15
2.1
16
88
5
50
60
0
3
36
1.12
3933517--3933542
13
2.0
13
100
0
52
46
0
0
53
1.00
3933631--3933661
16
1.9
16
93
0
53
48
0
0
51
1.00
3933710--3933752
10
4.3
10
80
8
52
41
0
0
58
0.98
3933690--3933749
18
3.2
18
75
13
57
46
0
0
53
1.00
3938993--3939032
18
2.2
18
100
0
80
52
15
7
25
1.68
3941054--3941084
15
2.1
15
94
5
55
70
0
0
29
0.87
3946173--3946197
6
4.2
6
100
0
50
0
0
16
84
0.63
3951211--3951250
18
2.2
19
91
8
66
20
47
22
10
1.79
3952476--3952506
2
15.5
2
100
0
62
51
0
0
48
1.00
3955714--3955755
2
22.0
2
80
9
52
54
0
0
45
0.99
3955714--3955755
16
2.6
16
92
0
66
54
0
0
45
0.99
3973418--3973490
36
2.0
36
100
0
146
21
23
16
38
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3977653--3977709
3
19.0
3
79
13
64
64
0
35
0
0.93
3977654--3977714
16
4.0
16
78
16
67
62
0
37
0
0.96
3977654--3977694
8
5.1
8
85
8
57
60
0
39
0
0.96
3977748--3977800
15
3.5
16
73
19
51
66
0
33
0
0.92
3977747--3977801
14
3.7
14
76
9
56
65
0
34
0
0.93
3978243--3978301
30
1.9
31
89
3
93
67
3
5
23
1.26
3978266--3978509
136
1.8
133
80
6
294
55
8
8
27
1.58
3978680--3978715
12
2.8
13
87
4
56
75
0
2
22
0.94
3978402--3979188
302
2.6
300
85
8
1050
55
6
8
29
1.54
3978678--3979104
154
2.8
154
84
5
527
56
6
7
28
1.53

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328