Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr07 97507971 
Parameters: 2 7 7 80 10 50 1000
Length:  97507971

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   

This is table  155  of  328  ( 39316 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45297440--45297675
86
2.8
85
81
5
280
35
20
14
29
1.92
45297533--45297919
157
2.5
156
79
5
449
33
20
15
30
1.93
45297611--45297746
71
1.9
71
89
0
209
31
20
15
32
1.94
45297768--45297904
71
1.9
71
92
0
229
32
22
15
29
1.95
45299497--45299526
15
1.9
16
93
6
53
0
6
3
90
0.56
45300117--45300154
6
6.7
6
90
6
53
0
7
2
89
0.57
45300109--45300154
15
3.2
15
87
9
69
0
6
4
89
0.60
45300110--45300154
22
2.0
22
91
0
72
0
6
4
88
0.61
45303987--45304034
16
3.1
15
90
6
69
64
2
2
31
1.16
45303983--45304038
24
2.3
24
81
6
69
66
1
1
30
1.12
45303983--45304034
8
6.5
8
82
8
61
65
1
1
30
1.14
45304188--45304252
25
2.8
24
83
6
80
52
6
7
33
1.55
45304272--45304400
23
5.6
23
72
14
88
57
3
4
34
1.35
45304893--45305027
30
4.5
30
84
1
148
23
3
46
25
1.69
45304893--45305027
60
2.2
60
84
2
164
23
3
46
25
1.69
45308000--45308024
9
2.8
9
100
0
50
88
0
12
0
0.53
45309380--45309444
26
2.5
26
75
14
62
73
1
4
20
1.08
45309387--45309445
19
3.1
19
80
7
66
74
1
5
18
1.09
45309394--45309448
20
2.8
19
79
15
60
70
1
5
21
1.16
45309386--45309578
9
20.7
9
69
17
92
66
3
3
26
1.23
45309446--45309500
19
2.8
19
86
2
65
58
7
1
32
1.36
45309526--45309578
19
2.8
19
80
2
63
67
1
1
28
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45309972--45310035
19
3.4
19
76
6
67
31
0
4
64
1.14
45309992--45310045
28
1.9
28
85
7
74
33
0
5
61
1.19
45310094--45310177
26
3.2
26
73
13
73
33
2
0
64
1.07
45316743--45316852
34
3.4
32
69
16
84
30
7
2
60
1.38
45316743--45316867
63
2.0
65
88
3
191
32
6
3
58
1.39
45323570--45323658
46
1.9
46
97
0
169
16
30
16
35
1.92
45324276--45324323
20
2.5
20
86
3
62
64
2
6
27
1.28
45324318--45324380
27
2.3
26
76
15
65
47
9
1
41
1.45
45324347--45324376
15
2.0
15
93
0
51
40
10
0
50
1.36
45325921--45325950
15
1.9
16
93
6
53
73
0
3
23
0.98
45332862--45332931
27
2.5
28
93
2
124
30
12
25
31
1.93
45335548--45335595
20
2.5
20
86
3
62
64
2
6
27
1.28
45335619--45335648
15
2.0
15
93
0
51
40
10
0
50
1.36
45337509--45337589
26
3.2
26
66
16
80
22
2
25
49
1.62
45337493--45337593
49
2.1
49
96
0
184
22
2
26
47
1.66
45347047--45347093
23
2.0
23
100
0
94
25
8
12
53
1.67
45348371--45348401
10
3.0
10
95
4
53
9
19
3
67
1.33
45351670--45351706
19
1.9
19
88
0
56
18
21
40
18
1.91
45356653--45356756
43
2.4
43
85
4
147
26
11
26
34
1.91
45358166--45358245
41
2.0
41
97
0
151
35
8
20
36
1.83
45360334--45360454
43
2.8
43
79
2
118
28
16
24
29
1.97
45362984--45363015
16
2.0
16
93
0
55
25
3
15
56
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45363442--45363774
24
13.9
24
73
10
234
25
11
27
36
1.90
45363443--45363746
48
6.3
48
77
4
299
25
11
26
36
1.90
45363443--45363745
96
3.2
96
93
0
516
25
11
26
36
1.90
45364172--45364331
26
6.2
26
91
0
266
33
6
23
36
1.82
45364172--45364331
52
3.1
52
96
0
293
33
6
23
36
1.82
45365807--45365859
26
2.0
26
82
7
63
37
20
15
26
1.92
45367920--45367945
12
2.2
12
100
0
52
7
15
30
46
1.74
45367999--45368258
41
6.4
39
87
6
240
36
22
21
19
1.95
45368000--45368258
82
3.2
82
87
4
339
36
22
22
19
1.95
45368403--45368456
7
7.7
7
78
0
54
24
0
25
50
1.50
45368411--45368495
21
3.9
21
75
11
89
28
1
25
44
1.61
45368422--45368511
46
2.0
46
97
0
171
30
2
25
42
1.67
45368538--45368673
7
19.1
7
71
10
71
22
0
41
36
1.54
45373234--45373336
43
2.4
43
95
0
179
22
23
30
24
1.99
45376868--45377027
26
6.2
26
91
0
266
33
6
23
36
1.82
45376868--45377027
52
3.1
52
96
0
293
33
6
23
36
1.82
45378503--45378555
26
2.0
26
82
7
63
37
20
15
26
1.92
45380450--45380479
2
15.0
2
100
0
60
50
0
0
50
1.00
45383702--45383771
27
2.5
28
88
2
106
31
25
14
28
1.95
45391628--45391697
27
2.5
28
88
2
106
31
25
14
28
1.95
45398150--45398253
43
2.4
43
83
3
129
26
16
24
32
1.96
45400646--45400864
45
4.9
45
90
2
320
23
22
28
25
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45400843--45400946
41
2.5
41
93
0
181
30
18
29
21
1.97
45402196--45402271
34
2.2
34
97
0
143
25
9
26
39
1.85
45402407--45402452
23
2.0
24
82
4
58
30
2
30
36
1.70
45416843--45416878
2
18.0
2
100
0
72
50
50
0
0
1.00
45420270--45420306
2
18.5
2
100
0
74
48
0
0
51
1.00
45426958--45427087
47
2.8
47
85
0
161
25
13
27
33
1.94
45429015--45429044
16
1.9
15
93
6
51
53
23
20
3
1.60
45429461--45429573
27
4.2
26
81
8
118
17
22
22
38
1.94
45429461--45429573
55
2.1
54
83
5
138
17
22
22
38
1.94
45431898--45431939
21
2.0
21
90
0
66
38
14
19
28
1.90
45438895--45439038
50
2.9
50
93
0
234
26
20
26
27
1.99
45441754--45441983
48
4.9
46
77
9
173
27
16
29
26
1.97
45441746--45442019
47
5.8
47
80
6
261
28
16
28
25
1.97
45441754--45442067
95
3.4
93
80
10
315
28
17
28
26
1.97
45445272--45445418
50
2.9
50
90
0
222
27
19
25
26
1.99
45449561--45449625
30
2.2
30
91
0
103
16
24
36
21
1.94
45452988--45453018
16
1.9
16
100
0
62
19
32
3
45
1.66
45452997--45453059
20
3.2
20
90
0
99
20
25
1
52
1.56
45468639--45468863
39
5.7
39
91
1
335
28
28
23
18
1.98
45473896--45474109
39
5.5
39
92
3
335
28
29
22
18
1.98
45483455--45483509
26
2.1
26
100
0
110
47
7
18
27
1.74
45484969--45485129
29
5.6
29
87
1
207
25
16
32
26
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45487286--45487467
39
4.6
39
87
2
240
24
22
30
23
1.99
45490197--45490456
46
5.6
47
84
5
343
20
23
15
41
1.89
45490197--45490544
92
3.9
92
83
5
417
20
23
14
41
1.89
45490202--45490544
138
2.6
129
87
4
461
20
23
14
41
1.89
45490418--45490549
38
3.2
38
81
14
156
21
23
14
40
1.90
45490457--45490551
46
2.1
46
95
0
172
23
23
12
41
1.88
45490379--45490549
84
2.0
85
89
1
263
21
23
14
39
1.91
45492398--45492455
11
5.2
11
79
4
62
62
1
1
34
1.16
45498014--45498063
20
2.5
20
96
0
91
42
16
18
24
1.89
45504733--45504783
17
3.0
17
73
15
52
39
9
1
49
1.47
45505347--45505410
27
2.3
29
83
5
78
34
0
1
64
1.03
45507340--45507403
22
2.8
23
83
4
85
37
14
15
32
1.87
45511119--45511316
40
4.9
40
91
4
287
27
21
25
25
1.99
45511119--45511351
120
1.9
120
80
10
271
27
21
26
24
1.99
45514791--45514853
21
3.0
21
88
0
90
28
19
19
33
1.96
45515838--45515897
28
2.1
29
81
3
68
43
16
11
28
1.83
45518351--45518468
25
4.7
25
75
8
91
21
29
16
32
1.95
45521695--45521750
27
2.1
27
90
6
87
35
10
23
30
1.89
45527448--45527563
48
2.5
44
83
5
124
37
9
6
46
1.63
45528077--45528101
13
1.9
13
100
0
50
64
4
16
16
1.44
45541534--45541570
17
2.2
17
100
0
74
10
51
0
37
1.37
45541858--45541915
25
2.3
25
96
0
107
36
3
10
50
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45549945--45550195
40
6.3
40
93
0
421
29
28
19
21
1.98
45552292--45552345
28
1.9
28
92
0
90
51
18
1
27
1.56
45558599--45558697
27
3.7
27
78
8
103
25
23
14
37
1.92
45565818--45565923
54
2.0
54
90
3
169
56
3
5
33
1.41
45566031--45566123
33
2.8
33
77
6
100
38
3
2
55
1.28
45586986--45587300
73
4.4
71
76
9
305
37
16
21
25
1.93
45586954--45587300
35
9.5
35
76
8
293
37
15
22
25
1.93
45586954--45587300
146
2.4
142
82
7
401
37
15
22
25
1.93
45587096--45587339
35
6.7
35
79
8
139
40
15
20
23
1.90
45587431--45587490
26
2.3
25
81
13
68
65
5
0
30
1.14

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328