Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr07 97507971 
Parameters: 2 7 7 80 10 50 1000
Length:  97507971

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   

This is table  191  of  328  ( 39316 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56850471--56850534
23
2.8
23
90
0
101
15
9
25
50
1.74
56852530--56852605
34
2.2
36
86
6
104
35
1
6
56
1.34
56853640--56853711
31
2.4
30
74
4
72
33
11
15
40
1.82
56853839--56853894
29
1.9
29
92
7
96
58
10
0
30
1.32
56857995--56858027
2
16.5
2
100
0
66
51
0
0
48
1.00
56865520--56865550
15
2.1
15
93
0
53
35
12
29
22
1.91
56866761--56866786
8
3.2
8
100
0
52
23
0
0
76
0.78
56873162--56873192
9
3.3
9
91
8
53
19
3
0
77
0.90
56874101--56874147
22
2.1
22
92
7
78
19
21
4
55
1.60
56876088--56876113
13
2.0
13
100
0
52
38
30
7
23
1.83
56882806--56882839
16
2.1
16
100
0
68
41
11
5
41
1.66
56885963--56886129
40
4.2
40
82
2
185
25
27
21
25
1.99
56885963--56886129
80
2.1
79
83
7
205
25
27
21
25
1.99
56886954--56886999
17
2.5
19
74
22
53
34
23
17
23
1.96
56893971--56894137
40
4.2
40
82
2
185
25
27
21
25
1.99
56893971--56894137
80
2.1
79
83
7
205
25
27
21
25
1.99
56894960--56895005
17
2.5
19
74
22
53
34
23
17
23
1.96
56895941--56895972
15
2.1
15
100
0
64
31
15
18
34
1.93
56902995--56903182
40
4.7
40
91
0
297
22
26
23
26
2.00
56907255--56907512
49
5.5
49
87
9
383
29
8
32
29
1.88
56907365--56907443
39
2.0
39
100
0
158
30
5
30
34
1.79
56907482--56907542
30
2.0
30
100
0
122
26
13
29
31
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56907433--56907591
79
2.0
79
100
0
318
26
10
32
30
1.89
56907246--56907640
128
3.0
128
84
7
558
29
8
32
30
1.87
56907512--56907734
49
4.6
49
97
0
410
27
8
33
30
1.86
56907345--56907689
177
2.0
167
91
5
546
28
8
32
31
1.87
56907836--56907957
37
3.3
37
97
0
226
25
19
33
21
1.97
56918870--56918917
25
1.9
25
86
0
69
39
8
16
35
1.79
56922190--56922331
40
3.5
40
83
1
124
27
23
26
22
1.99
56922229--56922357
40
3.2
39
84
6
152
24
22
27
25
2.00
56928257--56928290
14
2.3
14
90
10
50
82
0
5
11
0.83
56928257--56928292
16
2.2
16
90
0
54
83
0
5
11
0.80
56929583--56929724
40
3.5
40
83
1
124
27
23
26
22
1.99
56929622--56929750
40
3.2
39
84
6
152
24
22
27
25
2.00
56937263--56937308
22
2.1
22
84
4
58
47
8
0
43
1.34
56940099--56940200
29
3.5
29
90
0
150
23
33
15
27
1.95
56947959--56948060
29
3.5
29
90
0
150
23
33
15
27
1.95
56955998--56956043
22
2.1
22
84
4
58
47
8
0
43
1.34
56960029--56960129
39
2.5
40
85
1
132
30
22
24
21
1.99
56960029--56960211
40
4.6
40
82
3
181
27
22
26
23
1.99
56968121--56968221
39
2.5
40
85
1
132
30
22
24
21
1.99
56968121--56968303
40
4.6
40
82
3
181
27
22
26
23
1.99
56973606--56973650
20
2.2
20
88
0
63
48
2
13
35
1.54
56979325--56979405
31
2.7
30
86
5
110
23
12
9
54
1.67
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56979325--56979422
31
3.2
31
84
8
105
27
11
9
52
1.67
56981852--56981966
47
2.4
47
84
7
135
25
26
18
29
1.98
56981893--56982019
47
2.8
45
78
8
139
22
26
20
30
1.98
56984087--56984196
43
2.6
43
85
0
139
30
26
15
27
1.96
56984221--56984384
43
3.8
43
79
0
148
28
11
26
33
1.91
56989684--56989933
51
4.9
51
92
1
403
29
24
14
31
1.94
56992831--56992903
35
2.1
35
89
0
110
34
6
9
49
1.62
56993609--56993726
57
2.1
56
80
15
127
45
2
4
47
1.35
56994725--56994750
12
2.2
12
100
0
52
73
15
0
11
1.11
56996397--56996435
19
2.0
19
95
5
69
0
25
5
69
1.09
56996397--56996440
17
2.5
17
89
10
63
0
22
4
72
1.02
56999180--56999253
33
2.2
33
88
4
105
27
10
20
41
1.85
57001504--57001551
19
2.6
18
77
12
53
58
8
6
27
1.51
57002378--57002554
74
2.4
76
82
6
218
40
3
35
21
1.70
57002682--57002773
42
2.2
42
84
5
116
19
26
13
41
1.88
57003284--57003336
25
2.2
25
86
3
72
52
5
15
26
1.64
57005853--57005889
12
3.0
13
88
7
51
48
0
0
51
1.00
57026155--57026206
20
2.6
20
100
0
104
11
32
32
23
1.90
57033935--57034087
40
3.8
40
77
5
139
25
27
23
23
2.00
57042371--57042411
19
2.1
20
86
4
57
51
7
7
34
1.58
57044353--57044410
27
2.1
27
84
12
75
37
22
1
37
1.65
57046638--57046683
24
1.9
24
86
0
65
63
0
0
36
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57048386--57048461
31
2.5
31
84
0
98
34
13
7
44
1.72
57048910--57048984
29
2.6
29
81
14
93
52
13
12
22
1.73
57048934--57048983
28
1.9
24
88
12
64
60
10
8
22
1.55
57054781--57054848
34
2.0
34
100
0
136
29
20
2
47
1.65
57056218--57056425
40
5.2
40
83
2
231
25
22
26
25
2.00
57064353--57064560
40
5.2
40
84
2
240
25
22
26
25
2.00
57067923--57067961
20
2.0
20
89
0
60
74
2
0
23
0.94
57071122--57071159
5
7.4
5
88
5
58
81
0
2
15
0.80
57075569--57075605
5
7.4
5
88
11
58
81
0
2
16
0.81
57079796--57079870
3
25.7
3
84
12
95
64
1
32
2
1.16
57080345--57080375
14
2.2
14
94
0
53
51
0
0
48
1.00
57083909--57083948
2
20.0
2
94
0
71
47
0
2
50
1.14
57087169--57087193
10
2.5
10
100
0
50
28
20
0
52
1.47
57093189--57093225
18
2.1
18
100
0
74
48
16
13
21
1.80
57094417--57094637
46
4.8
46
84
3
273
23
21
27
28
1.99
57094412--57094637
93
2.4
93
85
2
285
23
21
27
27
1.99
57097752--57097883
40
3.3
38
80
9
140
28
26
19
25
1.99
57097766--57097889
40
3.1
40
83
4
151
27
28
20
23
1.99
57111117--57111246
40
3.2
40
76
13
133
24
26
24
24
2.00
57111133--57111283
40
3.8
40
81
7
139
22
26
23
27
2.00
57119010--57119176
40
4.2
40
80
8
162
23
26
23
26
2.00
57119026--57119176
80
1.9
79
83
6
198
23
27
23
26
2.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57126847--57126974
40
3.2
41
77
8
149
24
28
24
23
2.00
57126863--57127011
40
3.8
40
78
6
153
22
26
24
26
2.00
57134841--57134970
40
3.2
40
77
13
142
24
26
24
23
2.00
57134857--57135008
40
3.8
40
80
5
155
22
26
24
26
2.00
57134857--57135008
80
1.9
80
83
5
200
22
26
24
26
2.00
57139073--57139139
33
2.0
33
100
0
134
32
29
8
28
1.88
57150992--57151073
42
1.9
43
90
2
130
37
25
13
23
1.91
57157217--57157264
23
2.1
23
100
0
96
39
27
16
16
1.90
57157628--57157674
16
3.0
16
87
3
69
55
17
0
27
1.42
57165141--57165210
37
1.9
35
83
11
88
55
0
5
38
1.24
57166801--57166848
11
4.5
11
82
14
57
39
0
2
58
1.10
57166801--57166848
9
5.7
9
85
14
50
39
0
2
58
1.10
57166810--57166847
13
2.9
13
96
0
67
42
0
0
57
0.98
57166814--57166895
13
6.7
12
75
15
62
34
2
2
60
1.23
57169086--57169147
29
2.2
29
86
11
85
40
0
38
20
1.53
57172458--57172504
2
24.0
2
95
4
87
48
0
0
51
1.00
57172662--57172742
23
3.5
24
72
14
71
48
1
4
45
1.32
57172732--57172787
25
2.2
26
78
12
64
48
0
0
51
1.00
57174073--57174100
3
9.3
3
100
0
56
67
0
0
32
0.91
57178988--57179021
18
1.9
18
88
5
52
58
2
8
29
1.43
57181157--57181575
49
8.7
49
91
2
591
27
30
9
32
1.88
57184927--57185028
28
3.5
30
80
6
111
28
15
27
28
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57184956--57185031
29
2.7
28
76
13
75
28
15
26
28
1.96
57192297--57192445
80
1.9
80
81
2
183
22
30
24
22
1.99
57192338--57192445
40
2.7
38
85
8
128
21
29
25
23
1.99
57194712--57194757
25
1.9
23
86
8
65
28
0
8
63
1.24
57198317--57198533
46
4.7
46
90
1
292
39
15
24
21
1.91
57198268--57198533
138
2.0
130
84
7
345
38
15
24
21
1.92
57198794--57198840
25
2.0
25
83
8
62
53
4
14
27
1.60
57206461--57206585
45
2.9
44
84
7
157
21
32
23
23
1.98
57211116--57211144
7
4.1
7
100
0
58
27
0
13
58
1.36
57212169--57212673
132
3.8
131
77
4
442
27
19
16
36
1.94

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328